1
1 CIMO/School of Agriculture, Polytechnic Institute of Bragança, Campus de Santa Apolónia, Apartado 1172, 5301-854 Bragança, Portugal. *e-mail: [email protected] 2 WSL/Swiss Federal Institute for Forest, Snow and Landscape Research, Zuercherstrasse 111, CH-8903 Birmensdorf, Switzerland Characterization of isolates in chestnut stands for virus- infection, vegetative compatibility (vc) type, mating type and microsatellite haplotype. In Portugal. Methods and Results 1 2 3 4 1. Chestnut groves Tissue samples withe chestnut blight were collected from all the Chestnut trees (one sample per Chestnut). 133 isolates of Cryphonectria parasitica were obtained (38 from Vilar de Peregrinos, 28 from from Parada, 28 from Rio bom and 39 from Sendim. Parada - Bragança Rio Bom – Vila Real Vilar de Peregrinos - Bragabça Sendim - Porto Four Chestnut stands located in Northern of Portugal were selected: two in Bragança region, Vilar de Peregrinos and Parada; one in Vila Real region, Rio Bom; one in Porto region, Sendim. Chestnut stands with 25 years and with more than 70% of the trees have chestnut blight. 2. Isolation, purification and identification 3. Morphological and physiologic characterization of C.parasitica population Were characterized 133 isolates for virus-infection, vegetative compatibility (vc) type and mating type. Four vc-types were observed, although the Portuguese C. parasitica population is currently dominated by a single vc type (EU-11). Cryphonectria hypovirus 1 (CHV-1) was found in two populations. Genetic analysis of the CHV-1 isolates revealed that three viral strains belong to the Italian subtype and three to the French subtype. Fig. 1 - Vc-type and mating type Fig. 2- Isolates and virus-infection 4. Genetic diversity of C. parasitica Introduction The European chestnut (Castanea sativa Mill.) agro-ecosystem has been of high social, economic, and landscape importance in Portugal. Chestnut blight caused by the fungus Cryphonectria parasitica is considered a major cause of the decline of chestnut trees across Europe. C. parasitica is an ascomycete (Diaporthales) that is native to eastern Asia. Infection of chestnut trees with this pathogen is typically associated with extensive bark necrosis (so-called cankers) on stems and branches, resulting in the subsequent death of the part of the tree above the infection point. Chestnut blight in Portugal was first reported in 1992 and since expanding in distribution. Here, we investigated the invasion history of C. parasitica and its associated hypovirus in Portugal. Objectives According with the Evanno test, the most probable genetic group (K) is 2, identifying Sergude as a population source. Analyzing structure K=4, it is possible to differentiate populations of Parada relatively to Vilar de Peregrinos and Rio Bom, coinciding with the PCO analysis, and likewise haplotype variation. Conclusion This study shows that the genetic diversity of the Chestnut blight fungus C. parasitica has increased in Portugal. This genetic diversification is mainly due the further natural ou human-mediated introduction of new haplotypes, but in part also to sexual reproduction and recombination of the fungus in situ. The diversity of the hypoviruses has different in different regions, suggesting that they have different ancestor. Rio Bom Vilar de Peregrinos Parada Sendim K=2 K=3 K=4 Fig. 5 - Structure graphic presenting the genetic composition the C. parasitica for K=2-4 Fig. 3 – Populational analyses of C. parasitica (Analyses for principal coordinates; B – Haplotype variation; C – Genotypic variation Fig. 4 – Haplotypic distribution for C. parasitica A B C Acknowledgements: Project FCT (PTDC/AGR-PRO/4606/2012)

Apresentação do PowerPoint1CIMO/School ofAgriculture, Polytechnic Institute Bragança, Campus de Santa Apolónia, Apartado 1172, 5301-854 Bragança, Portugal. *e-mail: [email protected]

  • Upload
    others

  • View
    4

  • Download
    0

Embed Size (px)

Citation preview

Page 1: Apresentação do PowerPoint1CIMO/School ofAgriculture, Polytechnic Institute Bragança, Campus de Santa Apolónia, Apartado 1172, 5301-854 Bragança, Portugal. *e-mail: eric@ipb.pt

1CIMO/School of Agriculture, Polytechnic Institute of Bragança, Campus de Santa Apolónia, Apartado 1172, 5301-854 Bragança, Portugal. *e-mail: [email protected] WSL/Swiss Federal Institute for Forest, Snow and Landscape Research, Zuercherstrasse 111, CH-8903 Birmensdorf, Switzerland

Characterization of isolates inchestnut stands for virus-infection, vegetativecompatibility (vc) type, matingtype and microsatellitehaplotype. In Portugal.

Methods and Results

1 2 3

4

1. Chestnut groves

Tissue samples withe chestnut blight were collectedfrom all the Chestnut trees (one sample per Chestnut).133 isolates of Cryphonectria parasitica were obtained(38 from Vilar de Peregrinos, 28 from from Parada, 28from Rio bom and 39 from Sendim.

Parada - Bragança

Rio Bom – Vila RealVilar de Peregrinos

- BragabçaSendim - Porto

Four Chestnut standslocated in Northern ofPortugal were selected:two in Bragança region,Vilar de Peregrinos andParada; one in Vila Realregion, Rio Bom; one inPorto region, Sendim.Chestnut stands with 25years and with morethan 70% of the treeshave chestnut blight.

2. Isolation, purification andidentification

3. Morphological and physiologic characterization of C.parasitica population

Were characterized 133 isolates for virus-infection, vegetative compatibility (vc) typeand mating type. Four vc-types were observed, although the Portuguese C. parasiticapopulation is currently dominated by a single vc type (EU-11). Cryphonectria hypovirus 1(CHV-1) was found in two populations. Genetic analysis of the CHV-1 isolates revealedthat three viral strains belong to the Italian subtype and three to the French subtype.

Fig. 1 - Vc-type and mating type Fig. 2- Isolates and virus-infection

4. Genetic diversity of C. parasitica

IntroductionThe European chestnut (Castanea sativaMill.) agro-ecosystem has been of high social, economic, and landscapeimportance in Portugal. Chestnut blight caused by the fungus Cryphonectria parasitica is considered a majorcause of the decline of chestnut trees across Europe. C. parasitica is an ascomycete (Diaporthales) that is nativeto eastern Asia. Infection of chestnut trees with this pathogen is typically associated with extensive bark necrosis(so-called cankers) on stems and branches, resulting in the subsequent death of the part of the tree above theinfection point. Chestnut blight in Portugal was first reported in 1992 and since expanding in distribution. Here,we investigated the invasion history of C. parasitica and its associated hypovirus in Portugal.

Objectives

According with the Evanno test, the most probablegenetic group (K) is 2, identifying Sergude as apopulation source. Analyzing structure K=4, it is possibleto differentiate populations of Parada relatively to Vilarde Peregrinos and Rio Bom, coinciding with the PCOanalysis, and likewise haplotype variation.

Co

nclu

sio

n This study shows that the genetic diversity of the Chestnut blight fungus C. parasitica has increasedin Portugal. This genetic diversification is mainly due the further natural ou human-mediatedintroduction of new haplotypes, but in part also to sexual reproduction and recombination of thefungus in situ. The diversity of the hypoviruses has different in different regions, suggesting thatthey have different ancestor.

Rio BomVilar de Peregrinos

Parada

Sendim

K=2

K=3

K=4

Fig. 5 - Structure graphic presenting the genetic composition the C. parasitica for K=2-4

Fig. 3 – Populational analyses of C. parasitica (Analyses for principal coordinates; B – Haplotype variation; C – Genotypic variation

Fig. 4 – Haplotypic distribution for C. parasitica

A B C

Acknowledgements: Project FCT (PTDC/AGR-PRO/4606/2012)