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Breeding Invertebrates for Next Generation Biocontrol Bart Pannebakker – Coordinator Laboratory of Genetics – Wageningen University [email protected]

Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

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Page 1: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Breeding Invertebrates for Next Generation Biocontrol

Bart Pannebakker – Coordinator

Laboratory of Genetics – Wageningen University [email protected]

Page 2: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Food security

• Food security under threat by current & invasive pests

• Invertebrate pests destroy 20% of world food production (€73 billion)

• Protection challenging – EU pesticide regulations

Page 3: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Biological control

• Biological control: safe solution

• Often relies on imported natural enemies

• Regulations restrict import of exotic biocontrol agents – Biosafety concerns – Nagoya protocol

• Access & Benefits Sharing

Page 4: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Optimization

• Optimize existing and native biocontrol agents – Reduce dependence on imported natural enemies

• Exploit existing natural genetic variation to improve efficiency – Selection of strains from nature – Selective breeding

Page 5: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Traits to target

• System specific – Crop, pest, natural enemy

• Life-history traits – Reproductive potential – Environmental sensitivity

• Modelling studies

Page 6: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

BINGO-ITN

• Innovative Training Network for Early Stage Researchers • Advance current knowledge on the use of natural

genetic variation in biocontrol practice

• Enhance the application of (quantitative) genetic methods to invertebrate biocontrol

• Train young researchers in an extensive suite of interdisciplinary skills

Page 7: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Biological control Genetics

Genetic improvement

• Not a new idea, but... • Stricter legislation • Advances in genomics and next-generation

sequencing technologies

timely! February 2017

Page 8: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Se

Ecology

Agriculture

Biocontrol

(Quant.) Genetics Genomics

Evolution

Modelling

Interdisciplinary by nature

Page 9: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

BINGO-ITN

Universities

WU UB RUG VV UL UJI JCU

Institutes

INRA IVIA BC FAO CABI

Industry

Koppert Bio-insecta AMW

BINGO - participants

Page 10: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

BINGO - participants

13 PhD students (ESRs)

24 researchers

Page 11: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Develop breeding tools

WP5:

Monitoring & Risk Assessment

WP6: Performance

Natural genetic variation

Genetic markers

Trait-associated genetic markers

Strains/ populations

WP7: Natural genetic variation, genomes & application

WP4: Rearing & Storage

RP1

RP10 RP11

RP12 RP13

RP2

RP3

RP4

RP5

RP6

RP7

RP8

RP9

Reproductive Potential

Environmental Sensitivity

Challenges in Integrated Pest Management (IPM)

Page 12: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

WP4 – Rearing and storage

RP no Project title ESR Host

RP2 Fecundity & scales in Ephestia Sander Visser

BC

RP4 Clutch size, sex ratio, and differential mortality in the Bracon hebetor / B. brevicornis species complex Simone Ariens UB

RP8 Optimization of mass rearing of Bactrocera oleae and its parasitoids Erica Ras FAO

Kostas Bourtzis FAO

Research Objectives • Formulate general principles for mass rearing and storage of biocontrol agents • Explore alternative mass rearing approaches that maintain desirable trait

phenotypes

Page 13: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

WP5 – Monitoring and Risk assessment

RP no Project title ESR Host

RP6 Benefits and risks of using the native polyphagous biological control agent, Anastatus bifasciatus, against invasive stink bug Halyomorpha halys

Judith Stahl CABI

RP12 Monitoring pre- and post-release diversity in local parasitoid populations

Sophie Chattington UB

Tim Haye CABI

Research Objectives • Quantify the risk of non-target effects of inundatively released egg parasitoids • Monitor persistence of released biocontrol agents and potential risks of

replacements of con-generic or non-related species

Page 14: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

WP6 – Performance

RP no Project title ESR Host

RP3 Promoting adaptability of Amblyseius swirskii predatory mites to tomato crop Angeliki Paspati IVIA

RP7 Improving pest control efficiency: a modelling approach Wouter Plouvier INRA

RP10 Minimizing plant damage through selected Nesidiocoris tenuis

Milena Chinchilla Ramírez IVIA

RP11 Expanding the range of uses of Phytoseiulus persimilis predatory mites Sophie le Hesran KBV

Tom Groot Koppert

Research Objectives • Generate a mathematical modeling framework for predicting key biocontrol

agent performance traits • Artificial selection on predicted performance traits in three biocontrol agents, • Test success of using artificial selection to increase performance

Page 15: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

WP7 – Natural genetic variation genomes & application

RP no Project title ESR Host

RP1 Population genomics of natural enemies Kim Ferguson WU

RP5 Genomic basis of life history traits and reproductive potential

Kelley Leung RUG

RP9 The genetic basis of diapause in natural Drosophila melanogaster populations Manolis Lirakis VV

RP13 Genome-based selection for the improvement of natural enemies in biocontrol Shuwen Xia WU

Bas Zwaan WU

Research Objectives • Develop genome-wide genetic markers for field monitoring, for estimating

and tracking variation mass-reared biocontrol agent strains • Unravel the genes that underlying phenotypic variation in relevant biocontrol

agent traits • Develop genomic selection methods for improvement of biocontrol agents

Page 16: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

BINGO –Training & Dissemination • BINGO Summer Schools:

– Research skills, Professional skills & Careers

• BINGO Workshops: – Genomics & evolution in invertebrates (2018) – Integrating genetics & biocontrol: from lab to market (2018)

• Outreach:

– Professionals – Public – High school students

Andra Thiel UB

Leo Beukeboom RUG

Page 17: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection
Page 18: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Visit BINGO website: • http://www.bingo-itn.eu/ • Sign up for BINGO newsletter @bingo_itn Contact BINGO: [email protected]

More information?

Margreet Bruins

This project has received funding from the European Unions Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No 641456

Page 19: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection
Page 20: Breeding Invertebrates for Next · 2017. 2. 14. · RP9. The genetic basis of diapause in natural Drosophila melanogaster populations. Manolis Lirakis . VV: RP13. Genome-based selection

Develop breeding tools

WP5:

Monitoring & Risk Assessment

WP6: Performance

WP3: Dissemination, Exploitation and Outreach

WP2: Scientific training & courses

WP1: Management & Coordination

Natural variation

Genetic markers

Trait-associated genetic markers

Strains/ populations

WP7: Natural genetic variation, genomes & application

WP4: Rearing & Storage

RP1

RP10 RP11

RP12 RP13

RP2

RP3

RP4

RP5

RP6

RP7

RP8

RP9

Reproductive Potential

Environmental Sensitivity

Challenges in Integrated Pest Management (IPM)