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Living S cells (control) Living R cells (control) Heat-killed S cells (control) Mixture of heat-killed S cells and living R cells Mouse dies Mouse dies Mouse healthy Mouse healthy Living S cells RESULTS EXPERIMENT 1

Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

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Page 1: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Living S cells (control)

Living R cells (control)

Heat-killed S cells (control)

Mixture of heat-killed S cells and living R cells

Mouse dies Mouse dies Mouse healthy Mouse healthy

Living S cells

RESULTS

EXPERIMENT

1

Page 2: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Bacterial cell

Phage head

Tail sheath

Tail fiber

DNA

100

nm

2

Page 3: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

EXPERIMENT

Phage

DNA

Bacterial cell

Radioactive protein

Radioactive DNA

Batch 1: radioactive sulfur (35S)

Batch 2: radioactive phosphorus (32P)

Empty protein shell

Phage DNA

Centrifuge

Centrifuge

Pellet

Pellet (bacterial cells and contents)

Radioactivity (phage protein) in liquid

Radioactivity (phage DNA) in pellet

3

Page 4: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Sugar–phosphate backbone

5ʹ′ end

Nitrogenous bases

Thymine (T)

Adenine (A)

Cytosine (C)

Guanine (G)

DNA nucleotide

Sugar (deoxyribose) 3ʹ′ end

Phosphate

4

Page 5: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

(a) Rosalind Franklin (b) Franklin’s X-ray diffraction photograph of DNA

5

Page 6: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

(c) Space-filling model

Hydrogen bond 3ʹ′ end

5ʹ′ end

3.4 nm

0.34 nm

3ʹ′ end

5ʹ′ end

(b) Partial chemical structure (a) Key features of DNA structure

1 nm

6

Page 7: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Purine + purine: too wide

Pyrimidine + pyrimidine: too narrow

Purine + pyrimidine: width consistent with X-ray data

7

Page 8: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Cytosine (C)

Adenine (A) Thymine (T)

Guanine (G)

8

Page 9: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

A T

G C

T A

T A

G C

(a) Parent molecule

A T

G C

T A

T A

G C

(c) “Daughter” DNA molecules, each consisting of one parental strand and one new strand

(b) Separation of strands

A T

G C

T A

T A

G C

A T

G C

T A

T A

G C

9

Page 10: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Parent cell First replication

Second replication

(a) Conservative model

(b) Semiconserva- tive model

(c) Dispersive model

10

Page 11: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

EXPERIMENT

RESULTS

CONCLUSION

1 2

4 3

Conservative model

Semiconservative model

Dispersive model

Bacteria cultured in medium containing 15N

Bacteria transferred to medium containing 14N

DNA sample centrifuged after 20 min (after first application)

DNA sample centrifuged after 40 min (after second replication) More

dense

Less dense

Second replication First replication

11

Page 12: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Origin of replication Parental (template) strand

Daughter (new) strand

Replication fork

Replication bubble

Two daughter DNA molecules

(a) Origins of replication in E. coli

Origin of replication Double-stranded DNA molecule

Parental (template) strand Daughter (new) strand

Bubble Replication fork

Two daughter DNA molecules

(b) Origins of replication in eukaryotes

0.5 µm

0.25 µm

Double- stranded DNA molecule

12

Page 13: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Topoisomerase

Helicase

Primase Single-strand binding proteins

RNA primer

5ʹ′ 5ʹ′

5ʹ′ 3ʹ′

3ʹ′

3ʹ′

13

Page 14: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

A

C

T

G

G

G

G C

C C

C

C

A

A

A

T

T

New strand 5ʹ′ end

Template strand 3ʹ′ end 5ʹ′ end 3ʹ′ end

3ʹ′ end

5ʹ′ end 5ʹ′ end

3ʹ′ end

Base

Sugar

Phosphate

Nucleoside triphosphate

Pyrophosphate

DNA polymerase

14

Page 15: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Leading strand

Overview

Origin of replication Lagging strand

Leading strand Lagging strand

Primer

Overall directions of replication

Origin of replication

RNA primer

“Sliding clamp”

DNA poll III Parental DNA

5ʹ′

3ʹ′

3ʹ′

3ʹ′

3ʹ′

5ʹ′

5ʹ′

5ʹ′

5ʹ′

5ʹ′

15

Page 16: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Overview

Origin of replication

Leading strand

Leading strand

Lagging strand

Lagging strand

Overall directions of replication

1 2

16

Page 17: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Template strand

5ʹ′

5ʹ′ 3ʹ′

3ʹ′

RNA primer 3ʹ′ 5ʹ′

5ʹ′

3ʹ′

1

1 3ʹ′

3ʹ′ 5ʹ′

5ʹ′

Okazaki fragment

1 2

3ʹ′

3ʹ′

5ʹ′

5ʹ′

1 2

3ʹ′

3ʹ′

5ʹ′

5ʹ′

1 2

5ʹ′

5ʹ′

3ʹ′

3ʹ′

Overall direction of replication

17

Page 18: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Overview Origin of replication

Leading strand

Leading strand

Lagging strand

Lagging strand Overall directions

of replication

Leading strand

Lagging strand

Helicase

Parental DNA

DNA pol III

Primer Primase

DNA ligase

DNA pol III

DNA pol I

Single-strand binding protein

5ʹ′

3ʹ′

5ʹ′

5ʹ′

5ʹ′

5ʹ′

3ʹ′

3ʹ′

3ʹ′

3ʹ′ 1 3 2

4

18

Page 19: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Nuclease

DNA polymerase

DNA ligase

19

Page 20: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

Ends of parental DNA strands

Leading strand

Lagging strand

Lagging strand

Last fragment Previous fragment

Parental strand

RNA primer

Removal of primers and replacement with DNA where a 3ʹ′ end is available

Second round of replication

New leading strand

New lagging strand

Further rounds of replication

Shorter and shorter daughter molecules

5ʹ′

3ʹ′

3ʹ′

3ʹ′

3ʹ′

3ʹ′

5ʹ′

5ʹ′

5ʹ′

5ʹ′

20

Page 21: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

DNA double helix (2 nm in diameter)

Nucleosome (10 nm in diameter)

Histones Histone tail H1

DNA, the double helix Histones Nucleosomes, or “beads on a string” (10-nm fiber)

21

Page 22: Ch.16The Molecular Basis of Inheritance...Origin of replication Parental (template) strand Daughter (new) strand Replication fork Replication bubble Two daughter DNA molecules (a)

30-nm fiber

Chromatid (700 nm)

Loops Scaffold

300-nm fiber

Replicated chromosome (1,400 nm)

30-nm fiber Looped domains (300-nm fiber)

Metaphase chromosome

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