CHEM1101_Outline2013

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    Chemistry 1 – 2013

    Contacts

    First Year Coordinator: Dr Mark Ellison

    Lecturers Room Phone EmailProf Rob Stranger (RS) 1.44 6125 2934 [email protected] Dr Mark Ellison (ME) 1.33 6125 4398 [email protected] Dr Andrew Lawrence (AL) 1.25 6125 9525 [email protected]

    Timetable

    Day Time LocationCore Lectures Monday 11.00 am MCCT1

    Wednesday 12.00 noon MCCT1Friday 11.00 am MCCT1

     Advanced Lecture (HPO) Monday 1.00 pm CHEMT1Laboratory Monday-Friday 2-5 pm T5 & T6 building 136

    TutorialsTuesday

    1.00 pmRoom 3.07 (Building136)

    Friday 1.00 pmRoom 3.07 (Building136)

    MCC T1: Manning Clark Centre Lecture Theatre 1Building 136: New red science teaching building (adjacent to the Hancock Building)CHEMT1: Chemistry Lecture Theatre 1 (Building 34)

    Course Website – online resources

    Login using your student ID and password at http://wattle.anu.edu.au to find the coursewebsites for Chemistry 1 and Chemistry 2. You will be automatically added to thesewebsites the evening after you have enrolled in the courses via ISIS. If you cannot see theonline site/s, please contact the First Year Coordinator. These course websites will containlecture material, extra resources, self-test questions and discussion board postings.Please check these sites at least once per week for important notices.

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    Course Guidelines – in brief

    Assessment

     Assessment and attendance requirements for each course will be discussed with you and

    must be agreed upon within the first two weeks of semester. As a guide to discussion thecourse convenor will usually provide you with a document suggesting assessment.

    It is RSC policy that you must obtain a pass mark in the final exam to pass all courses.

    Students who fail to attend a laboratory session cannot submit a written report on thatlaboratory for assessment.

    Safety

    You must wear the appropriate protective clothing (laboratory coat, safety glasses andcovered shoes) to participate in a practical class. Students who do not comply will not bepermitted to work in the laboratory. Laboratory coats and safety glasses may bepurchased from the campus University Bookshop. (More information). Please refer to theChemistry 1 lab manual for information on the Research School of Chemistry’s policy onwearing contact lenses in the laboratory.

    Prerequisites

    You must have completed the correct prerequisite or have written approval of the course

    convenor for a valid enrolment in a course. Please refer to http://info.anu.edu.au/studyat/ or enquire at the Faculty of Science Office (Frank Fenner Building, Bldg 42).

    Student Representation

    Five students from first-year and one student from each of second and third year (as wellas Honours and PhD) will be elected in the first two weeks of semester to represent theiryear group on the Chemistry Department’s Teaching and Learning Committee. (MoreInformation)

    Policy on the Submission of Written Material

    This policy reflects the ANU Code of Academic Honesty in Learning and Teaching:http://info.anu.edu.au/policies/Codes_of_Practice/Students/Other/Academic_Honesty.asp 

    It is the responsibility of each student to ensure:

    •  Work submitted for assessment is genuine and original;•  Appropriate acknowledgement and citation is given to the work of others;•  He or she does not knowingly assist other students in academically dishonest

    practices;•  Familiarity with the expectations for academic honesty both in general, and in the

    specific context of particular disciplines or courses, where these expectations are

    clearly outlined in faculty and course guides and handbooks.

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    For Chemistry students the definitions and penalties are set out below.

    Plagiarism

    Plagiarism is copying, paraphrasing or summarising, without acknowledgement, any workof another person with the intention of representing this as the student’s own work. Thisremains plagiarism whether or not it is with the knowledge or consent of that other person.

    Direct copying falls under the definition of plagiarism. When students work together, theymust be sure to write independently, and not in collaboration with another student or groupof students. The purpose of assessment is to evaluate each student’s mastery of skillsand knowledge. It is acceptable for students to compare and discuss results ofexperiments of essay concepts, but written work must reflect individual effort and allwritten work must be the student’s own.

    To avoid plagiarism students must correctly acknowledge the work of others. If studentstranscribe, quote, paraphrase or summarise the ideas obtained form the work of others,they must identify the source and author of the original work and provide a bibliography.

    Penalty: zero marks. Serious, and in particular repeated instances of academicdishonesty, constitute misconduct and need to be dealt with under the ANU DisciplineRules.

    Multiple Submissions (Recycling)

    Recycling is the submission of work for assessment, which has been previously presentedby the same student for another assessment either at ANU or elsewhere. In some cases,lecturers will specifically allow this practice. If no specific provision is made then itconstitutes academic dishonesty when assessment is submitted a second or subsequenttime.

    Penalty: zero marks. Serious and, in particular repeated instances of academicdishonesty, constitute misconduct and need to be dealt with under the ANU DisciplineRules.

    Fabrication or Falsification of Data

    Fabrication of research is the representation of data, observation or other research activityas genuine, comprehensive and/or original when it has been arrived at through othermeans. These may be inventing data, using data gathered by other researchers withoutacknowledgement, or deliberately omitting data to obtain the apparently desired results.

     Any data presented as the result of laboratory work (in the form of drawings, graphs,tables or written work) must be true and representative of your findings.

    Penalty: zero marks. Serious and, in particular repeated instances of academicdishonesty, constitute misconduct and need to be dealt with under the ANU DisciplineRules.

    Collusion

    Collusion is the representation of original work of several persons as the work of a singlestudent. Collusion needs to be distinguished from collaboration, defined for the purposesof this document as work jointly undertaken and produced within permissible parameters.

     Another form of collusion involves representing the work of one good student as the work

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    of several individual students, in for example the situation where students A, B and C paystudent D to do the assignment and give them each a copy, which they then rephrase andsubmit as their own.

    Penalty: zero marks. Serious and, in particular repeated instances of academicdishonesty, constitute misconduct and need to be dealt with under the ANU Discipline

    Rules.

    Cheating

    Cheating in this code means the breach of rules regarding formal examinations, ordishonest practice in informal examination, tests or other assessments. Examples includethe use of prohibited material or equipment for unfair advantage, consultation with otherpersons during the course or the assessment where this is prohibited.

    Penalty: zero marks. Serious and, in particular repeated instances of academicdishonesty constitute misconduct and need to be dealt with under the ANU DisciplineRules.

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    Chemistry – The Central Science

    There are currently two first year Chemistry courses available at ANU:•  Chemistry 1 (CHEM1101) offered in semester 1, and•  Chemistry 2 (CHEM1201) offered in semester 2.

    Chemistry 1 and 2 together correspond to a full year course in general chemistry.

    Both Chemistry 1 and Chemistry 2 have an associated Honours Pathway Option (HPO).The HPO is strongly recommended for students with a strong background/interest inchemistry (from College, Science Summer School, Olympiad or equivalent) and forstudents who intend to go on with chemistry in second year.

    It is expected that all students in the PhB or Honours degree programs enrolled inChemistry 1 or Chemistry 2 will complete the HPO.  The latter consists of an additionaladvanced lecture each week which extends the core lecture material given in Chemistry 1

    and Chemistry 2. Students should note that Chemistry 1 is a necessary prerequisite forenrolment in the second semester course Chemistry 2 .

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    Chemistry 1 Outline

    Chemistry 1 is a one-semester chemistry course designed to cover the needs of a widevariety of students by offering a broad introduction to a range of chemical concepts. Thecourse serves not only as a sound foundation in chemistry, but also as a useful and

    necessary background for those whose main interests lie in engineering, the earth, orbiological sciences. Where possible, chemical principles are illustrated by applications tobiological or geological systems; the emphasis, however, is distinctly on developing aknowledge and understanding of a basic set of chemical concepts and facts.

    Course Aims:

     As it is assumed that students in Chemistry 1 will have completed at least a minor in highschool/college chemistry, the main emphasis lies in consolidating and extending thefactual basis of chemistry and developing a sound comprehension of the basicchemical principles and concepts.

    The general aims are to:1. consolidate a factual background in the language of chemistry (nomenclature),

    basic structural aspects, and major / typical reaction types.2. develop an understanding of the basic concepts of atomic structure, bonding,

    energy and entropy, and the kinetic theory of reactions.3. develop an understanding of how various structural features determine the main

    reactivity patterns of simple chemical compounds.4. develop problem solving skills, both qualitative and quantitative, in areas deriving

    from aims 1 - 3.

    Where possible, examples will be chosen to illustrate the application of these concepts

    and principles that are of relevance to biologists, engineers, geologists, or to the widercommunity.

    Later year courses in chemistry broaden and deepen students’ comprehension ofchemical concepts, principles, and their inter-relationships. These higher courses alsofurther develop students’ abilities to apply these principles to a wide variety of chemicalsystems and problems of current interest or importance.

    Course Structure, Content, and Objectives:

    The course material will follow fairly closely the structure and content of the two settextbooks (see below). Development of the chemical concepts and topics is described in

    the following syllabus. The syllabus also sets out the main learning objectives for eachsection; these objectives will be closely allied to the assessment process.

    Text Books:

    The prescribed textbook is:Chemistry Cubed by Andy Burrows, John Holman, Andy Parsons, Gwen Pilling andGareth Price, 1st Edition, Oxford University Press, 2009, ISBN: 9780199277896 [around$80].

    The following two text books are also suitable.M. S. Silberberg, Chemistry – The Molecular Nature of Matter and Change, 4th Edition,

    McGraw-Hill, 2006.

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    Laboratory CourseChemistry is essentially an experimental science. The laboratory program consists of avariety of experimental exercises designed to:

    1. illustrate and develop competence in a range of chemical techniques and

    manipulative skills.2. emphasise (particularly in first term) the importance of a quantitative analyticalapproach to chemical systems.

    3. develop an awareness of the scope and limitation of experimental observation andaccuracy.

    4. illustrate chemical topics, principles and concepts.

    Attendance

    Laboratory classes (3 hr sessions) will run for most of the semester, beginning in thesecond week. Attendance at ALL LABORATORY sessions is compulsory. Thesubmission of ALL LABORATORY REPORTS is compulsory.

     A pass in the prescribed laboratory work in each semester is required in order to gain apass in the Chemistry 1 and 2 courses.

     A schedule of experiments will be displayed on the noticeboard outside the ground floorstudent laboratories as well as on the CHEM1101 WATTLE site.

    Signing Up

    There will be a number of laboratory class groups operating on Monday to Fridayafternoons. Choose one group which is compatible with your timetable and sign up for

    this online using the “Laboratory Allocation” link on the CHEM1101 WATTLE homepagehttp://wattle.anu.edu.au. Discuss any timetable clashes immediately with the First YearCoordinator (Dr Mark Ellison, Room 1.33) or the First Year Laboratory Technician (MsBozena Belzowski).

    If you have satisfactorily completed the laboratory component of this course or a similarone, you may be eligible for a lab exemption. Please discuss the matter with the First YearCoordinator as soon as possible.PLEASE NOTE: A student who consumes any laboratory chemicals or ofcompounds that have been prepared in the laboratory will be excluded from thecourse.

    Fees

     A laboratory manual and the first set of lecture notes will be available for purchase fromJohn McLelland in the Teaching Administration area of the Research School of Chemistry(Building 33). There is a fee of $40 for these items. The fee also covers the other lecturebricks which will be issued during the semester. You will need to pay the $40 fee atScience Shop: http://scienceshop.anu.edu.au/. Please bring your receipt to JohnMcLelland in the Chemistry Office to collect your lecture notes and lab manual.

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    Equipment

    You need a laboratory coat, a pair of safety glasses and a notebook to record data in forlaboratory classes. Writing data on bits of paper is not good scientific practice.Laboratory coats ($29.95) and safety glasses ($7.50) can be purchased from theUniversity Bookshop.

    Molecular Models

    Three dimensional (3D) molecular structures will be used throughout the course.Stereochemical concepts (chemistry in 3D) can most readily be appreciated throughmanipulation of suitable molecular models. To facilitate this, exercises involving molecularmodels have been incorporated into the laboratory course. These limited exposures tomolecular models are, however, inadequate and you will most likely need to refresh yourknowledge of the many stereochemical features on a frequent basis.

    For this purpose, a Molymod molecular model kit is available for purchase from theUniversity Bookshop ($59.95). Two types of Darling Model Kits ($14 and $20) are also

    available to be purchased. Payment is made through the Science Shop(scienceshop.anu.edu.au) and the kits can be collected from John McLelland (onproduction of a receipt) in the Chemistry Administration Office (Building 33, level 1).

    Software

    The Department has purchased a self-learning software package in organic chemistryentitled Introduction to Organic Chemistry by Falcon Software. This package will enableyou to revise and consolidate lecture material, and the use of interactive animations willassist you in grasping difficult concepts in organic chemistry. The software is readilyaccessible on the PCs in the Department as well as on the PCs in the Teaching and

    Learning Technology Support Unit (TLTSU). In addition, there are on-line learningmaterials accompanying the text-books.

    The Online Resource Centre to accompany Burrows: Chemistry3 is now liveat: http://www.oxfordtextbooks.co.uk/orc/burrows/ 

    Mastering Chemistry on-line Quizzes

    There are 12 on-line quizzes (approximately weekly) for you to complete during thesemester. On-time completion of these 12 quizzes contributes to 6% of your semestermark in Chemistry 1.

    Each quiz will be available for 1 week. Each quiz can be first accessed on the Sundaystarting the week and will close at midnight on the following Sunday. Each quiz willcontain questions relevant to the previous week’s lecture content and will take about 30-40minutes to complete.

    Once the quiz has closed you can still access the quiz to use for revision, but you will beunable to submit the answers to the quiz.

    If you are struggling to submit a quiz on-time please see the First year Convenor (Dr MarkEllison) before the close of the quiz.

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    You will receive an email from Pearson Education with your login and password details.The web page for the Mastering Chemistry quizzes is:https://secure.ecollege.com/anumlp/ 

    The Mastering Chemistry quizzes guide you through the topics in chemistry with self-paced tutorials that provide individualised support. These assignable, in-depth tutorials are

    designed to support you with hints and feedback specific to your individualmisconceptions.

    Assessment

    To ensure a passing grade (or better), students are required to pass both theory andlaboratory components of the course.

     Assessment for the standard Chemistry 1 course includes the following components andsuggested weighting:

    •  a 11/2 hour Topic Exam, held at 7 pm on Tuesday 26th March [week 6] (23%);

    •  a 1

    1

    /2 hour Topic Exam, held at 7 pm on Monday 13th

     May [week 11] (23%);•  a 11/2 hour Topic Exam, held in the July exam period (23%);•  attendance at ALL laboratory sessions and submission of ALL laboratory reports

    (25%).•  Completion and on-time submission of the TWELVE Mastering Chemistry on-line

    quizzes (6%).

    The FIRST Topic Exam will assess lecture material covered in the first 12 lectures (givenby Rob Stranger) and will be held on the evening of Tuesday March 26th. The SECONDTopic Exam will assess lecture material covered in the second set of 12 lectures (given byMark Ellison) and will be held on the evening of Monday May 13th.  The THIRD TopicExam will assess lecture material from the set of 12 lectures (given by Andrew Lawrence)and will be held in the June exam period. It is hoped that the topic exams will alertstudents to the standards expected and give valuable early feed-back on progress.

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    Assessment of the (HPO)

    For students who wish to complete the Honours Pathway Option, there is an additional 1-hour exam, held in the June/July exam period. The exam will examine material ONLY from the 9 additional lectures.

    For those of you who undertake the HPO lectures, the assessment for the standardChemistry 1 course will count 90% towards the final grade and the examination associatedwith the Honours Pathway Option 10%. Students will be required to obtain a minimummark for the Honours Pathway Option of greater than or equal to 30% in order to have itregistered on their academic transcript.

    Supplementary Assessment

    The Supplementary Examination will be held at 9.30am on Monday 1st July.  Please putthis date in your diary. You will be formally advised after the end of semesterexamination whether you need to undertake supplementary assessment.

    Student Representation on Committees

    The Chemistry 1 Class Committee is a committee that are relevant to Chemistry 1students. SIX student members will be elected to represent the Chemistry 1 class.

    Election of these FIVE student representatives will be held in week 1. We look forward toyour active participation in the running and decision making of the Chemistry Departmenton matters that directly affect you, the undergraduate students of the Department.

    Please see the First Year Coordinator for advice about any aspect of Chemistry 1,

    methods of study, how to access chemistry resources, the exams and questions you haveabout the teaching. We hope you enjoy your experience in Chemistry at ANU.

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    VSEPR Model –electron groups –basic shapes –two electron groups –three electron groups –four electron groups –five electron groups –six electron groups

    Dipole Moments

    Valence Bond Theory

    Week 5

    Hybrid orbitals –sp hybrididation –sp

    2 hybridisation

     –sp3 hybridisation

     –sp3d hybridisation

     –sp3d

    2 hybridisation

     –hybridisation scheme –multiple bonds

    MO Model –general rules including bonding and antibonding orbitals –diatomic molecules –heteronuclear diatomics

    Introductory Chromatography –separation modes

     –adsorption and partition chromatography –TLC

     –preparing a TLC plate –Rf  values

    Week 6

    Acids, bases and aqueous equilibria –equilibrium state and Kc  –equilibrium constant –reaction quotient –Le Chatelier’s Principle –classical acid base definition –Lowry-Bronsted Theory –pH scale –autoionisation of water –conjugate acid-base pairs –Ka, Kb, Kw and pKa, pKb, pKw 

     –weak acid and base calculations –acid base properties of salts –calculations involving pKa and pKb.

    Week 7 –buffer solutions and how they work –calculation of the pH of a buffer –equivalence point and end point –indicators –weak acid-strong base titration –strong acid-weak base titration –calculating the pH at various stages on a pH curve.

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    Weeks 12 and 13

    Alkynes –review of MOs and bond strength –naming alkynes –reaction of alkynes

     –Electrophilic addition, hydrogenation, bromination. Hydrobromination, acid basereactions of terminal alkynes.

    Aromatic Hydrocarbons –electrophilic aromatic substitution

     –mechanism of subsitution –generating electrophiles –nitration of benzene and resonance stabilised cations

     –directing effects in electrophilic substitutions and monosubstituted benzenes –list of ortho and para directors –explanation of the factors that influence the course of electrophilic substitutions

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