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JN 07/04/22 Knowledge Systems Lab Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Page 1: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

JN 04/21/23

Knowledge Systems Lab

Med-LIFE:A System for Medical Imagery

Exploration

Joshua New

Erion Hasanbelliu

Page 2: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

Introduction

• What is Med-LIFE?

• What is image fusion?

• How do I teach the computer?

• How can I view the results?

Page 3: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

What is Med-LIFE?

• Med-LIFE is an application currently under development to use computer processing techniques to reduce medical personnel workload

• GUI designed with Qt• Image Processing with C (and VTK library)

Page 4: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

What is Med-LIFE?

• Consists of three processes (LIFE):– Learning of image attributes by the computer using

SFAM– Image Fusion of many image modalities into one

color image– Exploration of learning and fusion results

Page 5: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

What is Image Fusion?

• Allows the combination of multiple image modalities into one colored image with no information loss

• Reduces workload by eliminating the number of images a radiologist must analyze

• Images used from “The Whole Brain Atlas”– http://www.med.harvard.edu/AANLIB/home.html

Page 6: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

What is image fusion?

• Technique similar to primate vision

Page 7: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

Image Fusion Example

GADPD

SPECTT2Color Fuse Result

Page 8: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

Image Fusion Example

Page 9: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

How do I teach the computer?

• SFAM – Simplified Fuzzy ARTMAP• SFAM is a computer-based system

capable of online, incremental learning• Two “vectors” are sent to this system for

learning:– Input feature vector tells what data is

available from which to learn– Supervisory signal tells whether that vector

is an example or counterexample

Page 10: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

How do I teach the computer?

• Left-click to define examples (green)• Right-click to define counterexamples (red)

Main Window Zoom Window

Page 11: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

How do I teach the computer?

• Supervisory signal from red/green marks• Feature vector from slice pixel values for

original, single, and double opponent images

Page 12: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

Learning Results

Main Window Results Zoom Window Results

Page 13: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

Learning Results

T2Main Window Results

Page 14: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

How can I view results?

• Display a plethora of information• Skull generated for patient from PD modality

for contextual slice navigation• Explore tab provides several functions:

– Original images– Fusion results imbedded within 3D, patient-

generated skull– Learning results

Page 15: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

Demo Presentation

• Erion will now demo the Med-LIFE system

Page 16: Knowledge Systems Lab JN 12/19/2015 Med-LIFE: A System for Medical Imagery Exploration Joshua New Erion Hasanbelliu

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Knowledge Systems Lab

Conclusion

• Med-LIFE offers reduced workload to physicians who scan multiple images– Image processing and fusion reduces the

number of images to be analyzed– Learning system allows the computer to

perform prescreening or background analysis

– Exploration allows immersion within the data for surgery planning