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STRENDA
MIBBI Workshop 2010
= Standards for Reporting Enzymology Data
The Commission:R. Armstrong, A. Bairoch, A. Cornish-Bowden, P. Halling, J. Rohwer, T. Leyh, K. Tipton, D. Schomburg, C. Steinbeck and C. Kettner (co-ordination)
Missions:1. Standardized experimental conditions*;2. Definition of minimum information for reporting enzyme
functional data (“STRENDA Guidelines”);3. Definition of requirements for the submission of uniform
functional data (“STRENDA e-form”).
Founded and supported by the Beilstein-Institut since 2004www.strenda.org
Accompanied by Int‘l Symposia on ESCEC (next Sept. 2011)
* Van Eunen et al. (2010) FEBS J. 277(3):749-760
Minimum Information…
…about experimental set up.
…about materials and methods used.
…about data obtained.
e.g., identity and source of enzyme, description of reaction…
e.g. use of kinetic param. units, determination of params., inhibition and activation, statistics…
MIBBI Workshop 2010* http://www.beilstein-institut.de/STRENDA/eform/eform.html
…for the STRENDA„e-form“ *
e.g., preparation of enzyme, experimental conditions, methodology of assay,…
… for capturing uniform enzyme data.
Publication of materials, methods and results comprehensively.
The STRENDA Network
STRENDA
JCBN/ IUBMB
MIBBI
YSBN
NIHEFB-ESAB
?
SABIO-RK
BRENDA
Biochemistry
JBC
BBA
(all 9 sections)ABB
BBRC
?
MIBBI Workshop 2010
FEBSLett.
FEBS J. PLoS BMC
OMICS
Nat.Chem. Biol.
http://www.beilstein-institut.de/en/projects/strenda/
The Commission: Richard Armstrong, Vanderbilt Univ., Nashville, TN, USAAmos Bairoch, SBI, Geneva, SwitzerlandAthel Cornish-Bowden, CNRS-BIP, Marseille, FrancePeter Halling, Univ. of Strathclyde, Glasgow, UKJohann Rohwer, Univ. of Stellenbosch, South AfricaTom Leyh, The Albert Einstein College, New York, USAKeith Tipton, Trinity College, Dublin, IrelandDietmar Schomburg, Technical University of BraunschweigChristoph Steinbeck, EBI, Cambridge, UKCarsten Kettner, Beilstein-Institut, Frankfurt
STRENDA
There was a young lady called BRENDAAnd I tried to find data to send herBut she says "It's no good,And I think that you should Send me stuff that's consistent with STRENDA(Athel Cornish-Bowden, Feb. 2004)
There was a young lady called BRENDAAnd I tried to find data to send herBut she says "It's no good,And I think that you should Send me stuff that's consistent with STRENDA
(Athel Cornish-Bowden, Feb. 2004)