STRENDA

MIBBI Workshop 2010

= Standards for Reporting Enzymology Data

The Commission:R. Armstrong, A. Bairoch, A. Cornish-Bowden, P. Halling, J. Rohwer, T. Leyh, K. Tipton, D. Schomburg, C. Steinbeck and C. Kettner (co-ordination)

Missions:1. Standardized experimental conditions*;2. Definition of minimum information for reporting enzyme

functional data (“STRENDA Guidelines”);3. Definition of requirements for the submission of uniform

functional data (“STRENDA e-form”).

Founded and supported by the Beilstein-Institut since 2004www.strenda.org

Accompanied by Int‘l Symposia on ESCEC (next Sept. 2011)

* Van Eunen et al. (2010) FEBS J. 277(3):749-760

Minimum Information…

…about experimental set up.

…about materials and methods used.

…about data obtained.

e.g., identity and source of enzyme, description of reaction…

e.g. use of kinetic param. units, determination of params., inhibition and activation, statistics…

MIBBI Workshop 2010* http://www.beilstein-institut.de/STRENDA/eform/eform.html

…for the STRENDA„e-form“ *

e.g., preparation of enzyme, experimental conditions, methodology of assay,…

… for capturing uniform enzyme data.

Publication of materials, methods and results comprehensively.

The STRENDA Network

STRENDA

JCBN/ IUBMB

MIBBI

YSBN

NIHEFB-ESAB

?

SABIO-RK

BRENDA

Biochemistry

JBC

BBA

(all 9 sections)ABB

BBRC

?

MIBBI Workshop 2010

FEBSLett.

FEBS J. PLoS BMC

OMICS

Nat.Chem. Biol.

http://www.beilstein-institut.de/en/projects/strenda/

The Commission: Richard Armstrong, Vanderbilt Univ., Nashville, TN, USAAmos Bairoch, SBI, Geneva, SwitzerlandAthel Cornish-Bowden, CNRS-BIP, Marseille, FrancePeter Halling, Univ. of Strathclyde, Glasgow, UKJohann Rohwer, Univ. of Stellenbosch, South AfricaTom Leyh, The Albert Einstein College, New York, USAKeith Tipton, Trinity College, Dublin, IrelandDietmar Schomburg, Technical University of BraunschweigChristoph Steinbeck, EBI, Cambridge, UKCarsten Kettner, Beilstein-Institut, Frankfurt

STRENDA

There was a young lady called BRENDAAnd I tried to find data to send herBut she says "It's no good,And I think that you should Send me stuff that's consistent with STRENDA(Athel Cornish-Bowden, Feb. 2004)

There was a young lady called BRENDAAnd I tried to find data to send herBut she says "It's no good,And I think that you should Send me stuff that's consistent with STRENDA

(Athel Cornish-Bowden, Feb. 2004)