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Name Title Publication Ali, Asfar Activation of Vibrio cholerae quorum sensing promotes survival of an arthropod host. Nat Microbiol. 2017 Nov 27. doi: 10.1038/s41564-017-0065-7 Ali, Asfar Mutation in flrA and mshA Genes of Vibrio cholerae Inversely Involved in vps-Independent Biofilm Driving Bacterium Toward Nutrients in Lake Water. Front Microbiol. 2017 Sep 13;8:1770. doi: 10.3389/fmicb.2017.01770 Behringer, Donald Integrative taxonomy of the ornamental 'peppermint' shrimp public market and population genetics of Lysmata boggessi, the most heavily traded species worldwide. PeerJ. 2017 Sep 18;5:e3786. doi: 10.7717/peerj.3786 Behringer, Donald Competition with stone crabs drives juvenile spiny lobster abundance and distribution. Oecologia. 2017 May;184(1):205-218. doi: 10.1007/s00442-017-3844-1 Behringer, Donald Small-scale spatial variation in population- and individual-level reproductive parameters of the blue-legged hermit crab Clibanarius tricolor. PeerJ. 2017 Feb 15;5:e3004. doi: 10.7717/peerj.3004 Behringer, Donald Biophysical connectivity explains population genetic structure in a highly dispersive marine species Coral Reefs.2017 Mar;36(1):233-244. doi:10.1007/s00338-016-1516-y Behringer, Donald Commercial sponge fishery impacts on the population dynamics of sponges in the Florida Keys, FL (USA) Fisheries Research.2017 Jun;190:113- 121.doi:10.1016/j.fishres.2017.02.007

Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

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Page 1: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Name Title Publication

Ali, Asfar Activation of Vibrio

cholerae quorum sensing

promotes survival of an

arthropod host.

Nat Microbiol. 2017 Nov 27. doi:

10.1038/s41564-017-0065-7

Ali, Asfar Mutation

in flrA and mshA Genes

of Vibrio cholerae Inversely

Involved in vps-Independent

Biofilm Driving Bacterium

Toward Nutrients in Lake

Water.

Front Microbiol. 2017 Sep 13;8:1770. doi:

10.3389/fmicb.2017.01770

Behringer,

Donald

Integrative taxonomy of the

ornamental 'peppermint'

shrimp public market and

population genetics of Lysmata

boggessi, the most heavily

traded species worldwide.

PeerJ. 2017 Sep 18;5:e3786. doi:

10.7717/peerj.3786

Behringer,

Donald

Competition with stone crabs

drives juvenile spiny lobster

abundance and distribution.

Oecologia. 2017 May;184(1):205-218. doi:

10.1007/s00442-017-3844-1

Behringer,

Donald

Small-scale spatial variation in

population- and individual-level

reproductive parameters of the

blue-legged hermit

crab Clibanarius tricolor.

PeerJ. 2017 Feb 15;5:e3004. doi:

10.7717/peerj.3004

Behringer,

Donald

Biophysical connectivity

explains population genetic

structure in a highly dispersive

marine species

Coral Reefs.2017 Mar;36(1):233-244.

doi:10.1007/s00338-016-1516-y

Behringer,

Donald

Commercial sponge fishery

impacts on the population

dynamics of sponges in the

Florida Keys, FL (USA)

Fisheries Research.2017 Jun;190:113-

121.doi:10.1016/j.fishres.2017.02.007

Page 2: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Blackburn,

Jason

Modeling the Ecological Niche

of Bacillus anthracis to Map

Anthrax Risk in Kyrgyzstan

Am J Trop Med Hyg. 2017 Mar;96(3):550-556.

doi: 10.4269/ajtmh.16-0758

Blackburn,

Jason

Changing livestock vaccination

policy alters the epidemiology

of human anthrax, Georgia,

2000-2013.

Vaccine. 2017 Nov 1;35(46):6283-6289. doi:

10.1016/j.vaccine

Blackburn,

Jason

Modeling the environmental

suitability of anthrax in Ghana

and estimating populations at

risk: Implications for vaccination

and control

PLoS Negl Trop Dis. 2017 Oct

13;11(10):e0005885. doi:

10.1371/journal.pntd.0005885

Blackburn,

Jason

A 24-year exploratory spatial

data analysis of Lyme disease

incidence rate in Connecticut,

USA.

Geospat Health. 2017 Nov 8;12(2):588. doi:

10.4081/gh

Blackburn,

Jason

Correction to: A cross-

validation-based approach for

delimiting reliable home range

estimates.

Mov Ecol. 2017 Dec 5;5:26. doi: 10.1186/s40462-

017-0116-y

Blackburn,

Jason

Spores and soil from six sides:

interdisciplinarity and the

environmental biology of

anthrax (Bacillus anthracis)

bioRxiv 165548.2017 Ju;. doi:

https://doi.org/10.1101/165548

Blackburn,

Jason

An efficient extension of N-

mixture models for multi-

species abundance estimation

Methods in Ecology and Evolution.2017 Aug

21;doi:10.1111/2041-210X.12856

Blackburn,

Jason

Population Dynamics, Invasion,

and Biological Control of

Environmentally Growing

Opportunistic Pathogens

AEM.2017 SEP 1; 4:213-245.doi:10.1007/978-3-

319-60616-3_8

Page 3: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Blackburn,

Jason

Cultural influences behind

cholera transmission in the Far

North Region, Republic of

Cameroon: a field experience

and implications for operational

level planning of interventions

The Pan Afr Med J.2017 Dec

15;28:311.doi:10.11604/pamj.2017.28.311.1386

0

Bloomquist,

Jeff

N'-mono- and N, N'-diacyl

derivatives of benzyl and

arylhydrazines as contact

insecticides against adult

Anopheles gambiae.

Pestic Biochem Physiol. 2017 Nov;143:33-38.

doi: 10.1016/j.pestbp

Bloomquist,

Jeff

Pyrethroid resistance alters the

blood-feeding behavior in

Puerto Rican Aedes aegypti

mosquitoes exposed to treated

fabric.

PLoS Negl Trop Dis. 2017 Sep 20;11(9):e0005954.

doi: 10.1371/journal.pntd.0005954

Bloomquist,

Jeff

Application Site and Mosquito

Age Influences Malathion- and

Permethrin-Induced Mortality

in Culex quinquefasciatus

(Diptera: Culicidae).

J Med Entomol. 2017 Nov 7;54(6):1692-1698.

doi: 10.1093/jme/tjx160

Bloomquist,

Jeff

Synthesis and structure-activity

relationships of

carbohydrazides and 1,3,4-

oxadiazole derivatives bearing

an imidazolidine moiety against

the yellow fever and dengue

vector, Aedes aegypti.

Pest Manag Sci. 2017 Sep 4. doi:

10.1002/ps.4722

Bloomquist,

Jeff

Amitraz and its metabolite

modulate honey bee cardiac

function and tolerance to viral

infection.

J Invertebr Pathol. 2017 Oct;149:119-126. doi:

10.1016/j.jip

Bloomquist,

Jeff

Voltage-sensitive potassium

channels expressed after 20-

Hydroxyecdysone treatment of

a mosquito cell line.

Insect Biochem Mol Biol. 2017 Aug;87:75-80. doi:

10.1016/j.ibmb

Page 4: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Bloomquist,

Jeff

Determination of metabolic

resistance mechanisms in

pyrethroid-resistant and

fipronil-tolerant brown dog

ticks.

Med Vet Entomol. 2017 Sep;31(3):243-251. doi:

10.1111/mve.12240

Bloomquist,

Jeff

Permethrin and malathion

LD90 values for Culex

quinquefasciatus vary with

topical application site.

Med Vet Entomol. 2017 Sep;31(3):306-311. doi:

10.1111/mve.12236

Bloomquist,

Jeff

ATP-sensitive inwardly

rectifying potassium channel

modulators alter cardiac

function in honey bees.

J Insect Physiol. 2017 May;99:95-100. doi:

10.1016/j.jinsphys

Bloomquist,

Jeff

Mosquitocidal Activity and

Mode of Action of the

Isoxazoline Fluralaner.

Int J Environ Res Public Health. 2017 Feb 6;14(2).

pii: E154. doi: 10.3390/ijerph14020154

Bloomquist,

Jeff

Discovery of Species-selective

and Resistance-breaking

Anticholinesterase Insecticides

for the Malaria Mosquito.

Curr Med Chem. 2017;24(27):2946-2958. doi:

10.2174/0929867324666170206130024

Bloomquist,

Jeff

Toxicity and Synergistic

Activities of Chalcones Against

Aedes aegypti (Diptera:

Culicidae) and Drosophila

melanogaster (Diptera:

Drosophilidae).

J Med Entomol. 2017 Mar 1;54(2):382-386. doi:

10.1093/jme/tjw183.

Bloomquist,

Jeff

Sarniensine, a mesembrine-type

alkaloid isolated from Nerine

sarniensis, an indigenous South

African Amaryllidaceae, with

larvicidal and adulticidal

activities against Aedes aegypti.

Fitoterapia. 2017 Jan;116:34-38. doi:

10.1016/j.fitoteFitoterapia

Page 5: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Bloomquist,

Jeff

Toxicology of potassium

channel-directed compounds in

mosquitoes.

Neurotoxicology. 2017 May;60:214-223. doi:

10.1016/j.neuro

Capua, Ilaria Emergence of recombinant

Mayaro virus strains from the

Amazon basin.

Sci Rep. 2017 Aug 18;7(1):8718. doi:

10.1038/s41598-017-07152-5

Capua, Ilaria Epidemiological Risk Factors for

Animal Influenza A Viruses

Overcoming Species Barriers.

Ecohealth. 2017 Jun;14(2):342-360. doi:

10.1007/s10393-017-1244-y

Capua, Ilaria Avian influenza A in poultry

stalls of Lahore District,

Pakistan in 2009-2010.

J Infect. 2017 Jun;74(6):609-611. doi:

10.1016/j.jinf

Capua, Ilaria A genetically engineered H5

protein expressed in insect cells

confers protection against

different clades of H5N1 highly

pathogenic avian influenza

viruses in chickens.

Avian Pathol. 2017 Apr;46(2):224-233. doi:

10.1080/03079457

Cook, Robert Phosphatidylethanol in

Comparison to Self-Reported

Alcohol Consumption Among

HIV-Infected Women in a

Randomized Controlled Trial of

Naltrexone for Reducing

Hazardous Drinking.

Alcohol Clin Exp Res. 2018 Jan;42(1):128-134.

doi: 10.1111/acer

Cook, Robert Chronic Hepatitis C Increases

the Risk of Chronic Kidney

Disease (CKD) while Effective

HCV Treatment Decreases the

Incidence of CKD.

Hepatology. 2017 Sep 5. doi: 10.1002/hep.29505

Page 6: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Cook, Robert Comparative effectiveness of

dual vs. single-action

antidepressants on HIV clinical

outcomes in HIV-infected

people with depression.

AIDS. 2017 Nov 28;31(18):2515-2524. doi:

10.1097/QAD.0000000000001618

Cook, Robert The Relationship Between

Individual Characteristics and

Interest in Using a Mobile

Phone App for HIV Self-

Management: Observational

Cohort Study of People Living

With HIV.

JMIR Mhealth Uhealth. 2017 Jul 27;5(7):e100.

doi: 10.2196/mhealth.7853

Cook, Robert Interest in using mobile

technology to help self-manage

alcohol use among persons

living with the human

immunodeficiency virus: A

Florida Cohort cross-sectional

study.

Subst Abus. 2017 Jul 19:1-6. doi:

10.1080/08897077

Cook, Robert Acceptability and feasibility of a

randomized clinical trial of oral

naltrexone vs. placebo for

women living with HIV

infection: Study design

challenges and pilot study

results.

Contemp Clin Trials. 2017 Sep;60:72-77. doi:

10.1016/j.cct

Cook, Robert Association between alcohol

consumption trajectories and

clinical profiles among women

and men living with HIV.

Am J Drug Alcohol Abuse. 2017 Jun 16:1-10. doi:

10.1080/00952990

Cook, Robert Long-term alcohol use patterns

and HIV disease severity.

AIDS. 2017 Jun 1;31(9):1313-1321. doi:

10.1097/QAD.0000000000001473

Cook, Robert Comparative effectiveness of

dual-action versus single-action

antidepressants for the

treatment of depression in

people living with HIV/AIDS.

J Affect Disord. 2017 Jun;215:179-186. doi:

10.1016/j.jad

Page 7: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Cook, Robert A Systematic Review of

Naltrexone for Attenuating

Alcohol Consumption in

Women with Alcohol Use

Disorders.

Alcohol Clin Exp Res. 2017 Mar;41(3):466-472.

doi: 10.1111/acer.13313

Cook, Robert Association of midlife smoking

status with change in

processing speed and mental

flexibility among HIV-

seropositive and HIV-

seronegative older men: the

Multicenter AIDS Cohort Study.

J Neurovirol. 2017 Apr;23(2):239-249. doi:

10.1007/s13365-016-0496-6

Cook, Robert Prevalence and correlates of

marijuana use among HIV-

seropositive and seronegative

men in the Multicenter AIDS

Cohort Study (MACS), 1984-

2013.

Am J Drug Alcohol Abuse. 2017 Sep;43(5):556-

566. doi: 10.1080/00952990

Cook, Robert Marijuana use and viral

suppression in persons

receiving medical care for HIV-

infection.

Am J Drug Alcohol Abuse. 2017 Jan;43(1):103-

110. doi: 10.1080/00952990

Cook, Robert Body mass index, inflammatory

biomarkers and neurocognitive

impairment in HIV-infected

persons

Psychol Health Med. 2017 Mar;22(3):289-302.

doi: 10.1080/13548506

Cook, Robert Trajectories of Marijuana Use

among HIV-seropositive and

HIV-seronegative MSM in the

Multicenter AIDS Cohort Study

(MACS), 1984-2013

AIDS Behav. 2017 Apr;21(4):1091-1104. doi:

10.1007/s10461-016-1445-3

Cook, Robert Comparative effectiveness of

dual-action versus single-action

antidepressants for the

treatment of depression in

people living with HIV/AIDS

Affective Disorder, 2017 JUN;215:179-

186.doi:10.1016/j.jad.2017.03.042

Page 8: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Cook, Robert Sparse canonical correlation

analysis between an alcohol

biomarker and self-reported

alcohol consumption

Communications in Statistics-Simulation and

Computation,2017;46(1):doi:

10.1080/03610918.2016.1255971

Dark, Michael Cutaneous iridophoroma in a

Green iguana (Iguana iguana)

Vet Clin Pathol. 2017 Dec;46(4):625-628. doi:

10.1111/vcp.12536

Dark, Michael Microwave ablation for

treatment of hepatic neoplasia

in five dogs.

J Am Vet Med Assoc. 2017 Jan 1;250(1):79-85.

doi: 10.2460/javma.250.1.79

Dark, Michael A retrospective study of the

prevalence of calcium oxalate

crystals in veterinary Aspergillus

cases.

J Vet Diagn Invest. 2017 Jan;29(1):51-58. doi:

10.1177/1040638716672254

Dark, Michael Determination of metabolic

resistance mechanisms in

pyrethroid-resistant and

fipronil-tolerant brown dog

ticks.

Med Vet Entomol. 2017 Sep;31(3):243-251. doi:

10.1111/mve.12240

Dark, Michael Plasmodium falciparum CRK4

directs continuous rounds of

DNA replication during

schizogony

Dinglasan,

Rhoel

Cell Traversal Activity Is

Important for Plasmodium

falciparum Liver Infection in

Humanized Mice.

Cell Rep. 2017 Mar 28;18(13):3105-3116. doi:

10.1016/j.celrep

Dinglasan,

Rhoel

Erratum: Plasmodium

falciparum CRK4 directs

continuous rounds of DNA

replication during schizogony.

Nat Microbiol. 2017 Mar 6;2:17038. doi:

10.1038/nmicrobiol.

Page 9: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Dinglasan,

Rhoel

Plasmodium falciparum CRK4

directs continuous rounds of

DNA replication during

schizogony.

Nat Microbiol. 2017 Feb 17;2:17017. doi:

10.1038/nmicrobiol.2017.17

Dinglasan,

Rhoel

Sugar nucleotide quantification

by liquid chromatography

tandem mass spectrometry

reveals a distinct profile

in Plasmodium

falciparum sexual stage

parasites.

Biochem J. 2017 Mar 7;474(6):897-905. doi:

10.1042/BCJ20161030

Dinglasan,

Rhoel

SEXUAL DIMORPHISM IN

DEVELOPING GAMETOCYTES

Ameri. J of Trop Med and

Hygeine.2017;97(5):80-81

Fennelly, Kevin Tuberculosis Infectiousness and

Host Susceptibility.

J Infect Dis. 2017 Nov 3;216(suppl_6):S636-S643.

doi: 10.1093/infdis/jix361

Fennelly, Kevin Survival of pathogenic

Mycobacteriumabscessus

subsp. massiliense in

Acanthamoeba castellanii.

Res Microbiol. 2017 Oct 19. pii: S0923-

2508(17)30167-5. doi: 10.1016/j.resmic.2017

Fennelly, Kevin Ototoxicity monitoring through

the eyes of the treating

physician: Perspectives from

pulmonology and medical

oncology.

Int J Audiol. 2017 Oct 5:1-6. doi:

10.1080/14992027

Fennelly, Kevin Frequency of untreated

hypogammaglobulinemia in

bronchiectasis.

Ann Allergy Asthma Immunol. 2017

Jul;119(1):83-85. doi: 10.1016/j.anai

Page 10: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Fennelly, Kevin Pharmacotherapy for Non-

Cystic Fibrosis Bronchiectasis:

Results From an NTM Info &

Research Patient Survey and

the Bronchiectasis and NTM

Research Registry

Chest. 2017 Dec;152(6):1120-1127. doi:

10.1016/j.chest

Fennelly, Kevin The epidemiology,

pathogenesis, transmission,

diagnosis, and management of

multidrug-resistant, extensively

drug-resistant, and incurable

tuberculosis.

Lancet Respir Med. 2017 Mar 15. pii: S2213-

2600(17)30079-6. doi: 10.1016/S2213-

2600(17)30079-6

Fennelly, Kevin Cough physiology in elderly

women with nontuberculous

mycobacterial lung infections.

J Appl Physiol (1985). 2017 May 1;122(5):1262-

1266. doi: 10.1152/japplphysiol.00939

Fennelly, Kevin Outcomes, infectiousness, and

transmission dynamics of

patients with extensively drug-

resistant tuberculosis and

home-discharged patients with

programmatically incurable

tuberculosis: a prospective

cohort study.

Lancet Respir Med. 2017 Apr;5(4):269-281. doi:

10.1016/S2213-2600(16)30433-7

Folimonova,

Svetlana

Functional diversification upon

leader protease domain

duplication in the Citrus tristeza

virus genome: Role of RNA

sequences and the encoded

proteins.

Virology. 2017 Nov 30;514:192-202. doi:

10.1016/j.virol

Glass, Gregory A 24-year exploratory spatial

data analysis of Lyme disease

incidence rate in Connecticut,

USA.

Geospat Health. 2017 Nov 8;12(2):588. doi:

10.4081/gh.2017.588

Glass, Gregory Reply to Shanks and Brundage:

Many plausible mechanisms of

pandemic mortality disparities

Proc Natl Acad Sci U S A. 2017 May

2;114(18):E3588-E3589. doi:

10.1073/pnas.1703851114

Page 11: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Goss, Erica Pseudomonas floridensis sp.

nov., a bacterial pathogen

isolated from tomato.

Int J Syst Evol Microbiol. 2017 Nov 17. doi:

10.1099/ijsem.0.002445

Goss, Erica Phylogenomic analysis supports

multiple instances of polyphyly

in the oomycete

peronosporalean lineage.

Mol Phylogenet Evol. 2017 Sep;114:199-211. doi:

10.1016/j.ympev

Goss, Erica A Novel Phylogroup of

Pseudomonas cichorii Identified

Following an Unusual Disease

Outbreak on Tomato.

Phytopathology. 2017 Nov;107(11):1298-1304.

doi: 10.1094/PHYTO-05-17-0178-R

Goss, Erica High levels of diversity and

population structure in the

potato late blight pathogen at

the Mexico centre of origin.

Mol Ecol. 2017 Feb;26(4):1091-1107. doi:

10.1111/mec.14000

Havelaar, Arie Molecular relatedness of

ESBL/AmpC-producing

Escherichia coli from humans,

animals, food and the

environment: a pooled analysis.

J Antimicrob Chemother. 2017 Nov 18. doi:

10.1093/jac/dkx397

Havelaar, Arie A summary index for

antimicrobial resistance in food

animals in the Netherlands.

BMC Vet Res. 2017 Oct 24;13(1):305. doi:

10.1186/s12917-017-1216-z

Havelaar, Arie Disability weights for infectious

diseases in four European

countries: comparison between

countries and across

respondent characteristics.

Eur J Public Health. 2017 Sep 11. doi:

10.1093/eurpub/ckx090

Havelaar, Arie Evaluating the U.S. Food Safety

Modernization Act Produce

Safety Rule Standard for

Microbial Quality of Agricultural

Water for Growing Produce.

J Food Prot. 2017 Oct 9:1832-1841. doi:

10.4315/0362-028X.JFP-17-122

Page 12: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Havelaar, Arie Attribution of global foodborne

disease to specific foods:

Findings from a World Health

Organization structured expert

elicitation.

PLoS One. 2017 Sep 14;12(9):e0183641. doi:

10.1371/journal.pone.0183641

Havelaar, Arie Burden of salmonellosis,

campylobacteriosis and

listeriosis: a time series analysis,

Belgium, 2012 to 2020.

Euro Surveill. 2017 Sep 21;22(38). doi:

10.2807/1560-7917.ES

Havelaar, Arie High relative humidity pre-

harvest reduces post-harvest

proliferation of Salmonella in

tomatoes.

Food Microbiol. 2017 Sep;66:55-63. doi:

10.1016/j.fm.2017.04.003

Havelaar, Arie Diarrhoeal disease in children

due to contaminated food.

Bull World Health Organ. 2017 Mar 1;95(3):233-

234. doi: 10.2471/BLT.16.173229.

Havelaar, Arie Parasite to patient: A

quantitative risk model for

Trichinella spp. in pork and wild

boar meat.

Int J Food Microbiol. 2017 Jan 16;241:262-275.

doi: 10.1016/j.ijfoodmicro.2016.10.029

Havelaar, Arie Corrigendum to "Impact of

waning acquired immunity and

asymptomatic infections on

case-control studies for enteric

pathogens" [Epidemics 17

(2016) 56-63].

Epidemics. 2017 Jun;19:83-84. doi:

10.1016/j.epidem

Huigens,

Robert

Antimicrobial peptide-inspired

NH125 analogues: bacterial and

fungal biofilm-eradicating

agents and rapid killers of MRSA

persisters.

Org Biomol Chem. 2017 Jul 5;15(26):5503-5512.

doi: 10.1039/c7ob01028a

Huigens,

Robert

A Highly Potent Class of

Halogenated Phenazine

Antibacterial and Biofilm-

Eradicating Agents Accessed

Sci Rep. 2017 May 17;7(1):2003. doi:

10.1038/s41598-017-01045-3

Page 13: Name Title Publication Ali, Asfar Nat Microbiol. 2017 Nov 27. doiepi.ufl.edu/media/epiufledu/Final-Epi-Publications-2017.pdf · 2020-02-11 · Name Title Publication Ali, Asfar Activation

Through a Modular Wohl-Aue

Synthesis.

Huigens,

Robert

Nitroxoline: a broad-spectrum

biofilm-eradicating agent

against pathogenic bacteria.

Int J Antimicrob Agents. 2017 Feb;49(2):247-251.

doi: 10.1016/j.ijantimicag

Huigens,

Robert

Identification of N-Arylated

NH125 Analogues as Rapid

Eradicating Agents against

MRSA Persister Cells and Potent

Biofilm Killers of Gram-Positive

Pathogens.

Chembiochem. 2017 Feb 16;18(4):352-357. doi:

10.1002/cbic.201600622

Huigens,

Robert

A Tryptoline Ring-Distortion

Strategy Leads to Complex and

Diverse Biologically Active

Molecules from the Indole

Alkaloid Yohimbine.

Chemistry. 2017 Mar 28;23(18):4327-4335. doi:

10.1002/chem.201604795

Huigens,

Robert

Eradicating Bacterial Biofilms

with Natural Products and their

Inspired Analogues that

Operate Through Unique

Mechanisms

Currnt Top in Med Chm.2017;17(17):1954-

1964.doi:10.2174/156802661766616121415095

9

Hulcr, Jiri Cryptic genetic variation in an

inbreeding and cosmopolitan

pest, Xylosandrus crassiusculus,

revealed using ddRADseq

Ecol Evol. 2017 Nov 12;7(24):10974-10986. doi:

10.1002/ece3.3625

Hulcr, Jiri Performance of DNA

metabarcoding, standard

barcoding, and morphological

approach in the identification of

host-parasitoid interactions.

PLoS One. 2017 Dec 13;12(12):e0187803. doi:

10.1371/journal.pone.0187803

Hulcr, Jiri Wood decay fungus Flavodon

ambrosius (Basidiomycota:

Polyporales) is widely farmed by

two genera of ambrosia beetles.

Fungal Biol. 2017 Nov;121(11):984-989. doi:

10.1016/j.funbio.2017.08.004

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Hulcr, Jiri Expected Timber-Based

Economic Impacts of a Wood-

Boring Beetle (Acanthotomicus

Sp.) That Kills American

Sweetgum.

J Econ Entomol. 2017 Aug 1;110(4):1942-1945.

doi: 10.1093/jee/tox165

Hulcr, Jiri Acanthotomicus sp.

(Coleoptera: Curculionidae:

Scolytinae), a New Destructive

Insect Pest of North American

Sweetgum Liquidambar

styraciflua in China.

J Econ Entomol. 2017 Aug 1;110(4):1592-1595.

doi: 10.1093/jee/tox123

Hulcr, Jiri Geosmithia associated with

bark beetles and woodborers in

the western USA: taxonomic

diversity and vector specificity.

Mycologia. 2017;109(2):185-199. doi:

10.1080/00275514

Hulcr, Jiri Biological factors contributing

to bark and ambrosia beetle

species diversification.

Evolution. 2017 May;71(5):1258-1272. doi:

10.1111/evo.13219

Hulcr, Jiri Ambrosiella in Taiwan including

one new species

Myoscience.2017 JUL;58(4):242-252.doi:

10.1016/j.myc.2017.02.004

Hulcr, Jiri Studies of ambrosia beetles

(Coleoptera: Curculionidae) in

their native ranges help predict

invasion impact

Florida Entomologist.2017 JUN;100(2):257-

261.doi:10.1653/024.100.0219

Hulcr, Jiri The Ambrosia Symbiosis: From

Evolutionary Ecology to

Practical Management

Annual Review of Entomology.2-17;62:285-

303.doi:10.1146/annurev-ento-031616-035105

Irani, Tracy Obesity and reproduction: a

study to determine how

effectively medical education

enhances awareness of the

JBRA Assist Reprod. 2017 Dec 1;21(4):330-335.

doi: 10.5935/1518-0557.20170059

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reproductive risks related to

obesity

Johnson,

Judith

Corrigendum: A randomized

synbiotic trial to prevent sepsis

among infants in rural India

Nature. 2017 Nov 29. doi: 10.1038/nature25006

Johnson,

Judith

A randomized synbiotic trial to

prevent sepsis among infants in

rural India

Nature. 2017 Aug 24;548(7668):407-412. doi:

10.1038/nature23480

Johnson,

Judith

Heme Oxygenase-1 Deficiency

Diminishes Methicillin-Resistant

Staphylococcus aureus

Clearance Due to Reduced TLR9

Expression in Pleural

Mesothelial Cells

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10.1371/journal.pone.0169245

Karst,

Stephanie

The major targets of acute

norovirus infection are immune

cells in the gut-associated

lymphoid tissue.

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10.1038/s41564-017-0057-7.

Lauzardo,

Michael

Association between

Mycobacterium tuberculosis

lineage and site of disease in

Florida, 2009-2015.

Infect Genet Evol. 2017 Nov;55:366-371. doi:

10.1016/j.meegid

Lauzardo,

Michael

The Role of Powerlessness

Among Health Care Workers in

Tuberculosis Infection Control.

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doi: 10.1177/1049732317731317

Lauzardo,

Michael

Perceived Barriers to Adherence

to Tuberculosis Infection

Control Measures among

Health Care Workers in the

Dominican Republic.

MEDICC Rev. 2017

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Lednicky, John Pseudomonas floridensis sp.

nov., a bacterial pathogen

isolated from tomato.

Int J Syst Evol Microbiol. 2017 Nov 17. doi:

10.1099/ijsem.0.002445

Lednicky, John Complete Genome Sequences

of Identical Zika virus Isolates in

a Nursing Mother and Her

Infant.

Genome Announc. 2017 Apr 27;5(17). pii:

e00231-17. doi: 10.1128/genomeA.00231-17

Lednicky, John Genomic Sequences of

Epizootic Hemorrhagic Disease

Viruses Isolated from Florida

White-Tailed Deer.

Genome Announc. 2017 Oct 26;5(43). pii:

e01174-17. doi: 10.1128/genomeA.01174-17

Lednicky, John Collection of Viable Aerosolized

Influenza Virus and Other

Respiratory Viruses in a Student

Health Care Center through

Water-Based Condensation

Growth.

mSphere. 2017 Oct 11;2(5). pii: e00251-17. doi:

10.1128/mSphere.00251-17

Lednicky, John Evidence for Mother-to-Child

Transmission of Zika Virus

Through Breast Milk.

Clin Infect Dis. 2017 Dec 30. doi:

10.1093/cid/cix968

Lednicky, John Single-walled carbon nanotubes

modulate pulmonary immune

responses and increase

pandemic influenza a virus

titers in mice.

Virol J. 2017 Dec 22;14(1):242. doi:

10.1186/s12985-017-0909-z

Lednicky, John Complete Genome Sequence of

Human Coronavirus Strain 229E

Isolated from Plasma Collected

from a Haitian Child in 2016.

Genome Announc. 2017 Nov 22;5(47). pii:

e01313-17. doi: 10.1128/genomeA.01313-17

Lednicky, John A Role of Sp1 Binding Motifs in

Basal and Large T-Antigen-

Induced Promoter Activities of

Human Polyomavirus HPyV9

and Its Variant UF-1

Int J Mol Sci. 2017 Nov 14;18(11). pii: E2414. doi:

10.3390/ijms18112414

Lednicky, John Complete Genomic Sequence of

Dengue Virus Serotype 4

Isolated from Plasma Collected

from a Haitian Child in 2014.

Genome Announc. 2017 Oct 5;5(40). pii: e01160-

17. doi: 10.1128/genomeA.01160-17

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Lednicky, John Detection of Alphacoronavirus

vRNA in the Feces of Brazilian

Free-Tailed Bats (Tadarida

brasiliensis) from a Colony in

Florida, USA

Diseases. 2017 Feb 27;5(1). pii: E7. doi:

10.3390/diseases5010007

Lednicky, John Emergence of recombinant

Mayaro virus strains from the

Amazon basin.

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10.1038/s41598-017-07152-5

Lednicky, John Overcoming qRT-PCR

interference by select carbon

nanotubes in assessments of

gene expression.

Biotechniques. 2017 Aug 1;63(2):81-84. doi:

10.2144/000114578

Lednicky, John The Use of Bioaerosol Sampling

for Airborne Virus Surveillance

in Swine Production Facilities: A

Mini Review.

Front Vet Sci. 2017 Jul 27;4:121. doi:

10.3389/fvets.2017.00121

Lednicky, John Complete Genome Sequence of

Dengue virus Type 2 from a

Resident of North-Central

Florida with Locally Transmitted

Dengue Fever

Genome Announc. 2017 Aug 3;5(31). pii:

e00782-17. doi: 10.1128/genomeA.00782-17

Lednicky, John Semi-quantitative Influenza A

population averages from a

multiplex respiratory viral panel

(RVP): potential for reflecting

target sequence changes

affecting the assay.

Virol J. 2017 Jul 14;14(1):128. doi:

10.1186/s12985-017-0796-3

Lednicky, John Complete Genomic Sequence of

Dengue virus 1, Isolated from

Plasma Collected from a Haitian

Child in 2014.

Genome Announc. 2017 Jun 1;5(22). pii: e00331-

17. doi: 10.1128/genomeA.00331-17

Lednicky, John Drifted Influenza A and B

Viruses Collected by a Water-

Based Condensation Growth Air

Sampler in a Student Health

Care Center during an Influenza

Outbreak.

Genome Announc. 2017 Apr 13;5(15). pii:

e00178-17. doi: 10.1128/genomeA.00178-17

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Lednicky, John Complete Genome Sequences

of Chikungunya Viruses Isolated

from Plasma Specimens

Collected from Haitians in 2014.

Genome Announc. 2017 Apr 13;5(15). pii:

e00148-17. doi: 10.1128/genomeA.00148-17

Lednicky, John Isolation of Coronavirus NL63

from Blood from Children in

Rural Haiti: Phylogenetic

Similarities with Recent Isolates

from Malaysia

Amer J of Trop Med and Hygiene.2017

Jan;96(2):144-147.doi:10.4269/ajtmh.16-0685

Lednicky, John Coinfection With Zika and

Dengue-2 Viruses in a Traveler

Returning From Haiti, 2016:

Clinical Presentation and

Genetic Analysis

Clin Infect Dis.2017 Jan 1;64(1):72-

75.doi:10.1093/cid/ciw667

Liang, Song Environmental and socio-

demographic individual, family

and neighborhood factors

associated with children

intestinal parasitoses at Iguazú,

in the subtropical northern

border of Argentina

PLoS Negl Trop Dis. 2017 Nov

20;11(11):e0006098. doi:

10.1371/journal.pntd.0006098

Liang, Song Transport and public health in

China: the road to a healthy

future

Lancet. 2017 Oct 14;390(10104):1781-1791. doi:

10.1016/S0140-6736(17)31958-X

Liang, Song Prevalence of hepatitis C virus

infection and its correlates in a

rural area of southwestern

China: a community-based

cross-sectional study.

BMJ Open. 2017 Aug 11;7(8):e015717. doi:

10.1136/bmjopen-2016-015717

Liang, Song Spatiotemporal variability and

environmental factors of

harmful algal blooms (HABs)

over western Lake Erie.

PLoS One. 2017 Jun 28;12(6):e0179622. doi:

10.1371/journal.pone.0179622

Liang, Song Epidemiology of intestinal

helminthiasis among school

children with emphasis on

Schistosoma mansoni infection

in Wolaita zone, Southern

Ethiopia

BMC Public Health. 2017 Jun 20;17(1):587. doi:

10.1186/s12889-017-4499-x

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Liang, Song Interruption of schistosomiasis

transmission in mountainous

and hilly regions with an

integrated strategy: a

longitudinal case study in

Sichuan, China.

Infect Dis Poverty. 2017 Apr 7;6(1):79. doi:

10.1186/s40249-017-0290-6

Liang, Song Prevalence of and risk factors

associated with

Cryptosporidium infection in an

underdeveloped rural

community of southwest China

Infect Dis Poverty. 2017 Jan 9;6(1):2. doi:

10.1186/s40249-016-0223-9

Liang, Song Cultural influences behind

cholera transmission in the Far

North Region, Republic of

Cameroon: a field experience

and implications for operational

level planning of interventions

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15;28(311).doi:10.11604/pamj.2017.28.311.138

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Longini, Ira Simulations for designing and

interpreting intervention trials

in infectious diseases.

BMC Med. 2017 Dec 29;15(1):223. doi:

10.1186/s12916-017-0985-3

Longini, Ira Reply to Aguiar and

Stollenwerk.

Clin Infect Dis. 2017 Oct 21. doi:

10.1093/cid/cix883

Longini, Ira Ring vaccination with rVSV-

ZEBOV under expanded access

in response to an outbreak of

Ebola virus disease in Guinea,

2016: an operational and

vaccine safety report.

Lancet Infect Dis. 2017 Dec;17(12):1276-1284.

doi: 10.1016/S1473-3099(17)30541-8

Longini, Ira Dependency of Vaccine Efficacy

on Pre-Exposure and Age: A

Closer Look at a Tetravalent

Dengue Vaccine.

Clin Infect Dis. 2017 Aug 24. doi:

10.1093/cid/cix766

Longini, Ira Live-attenuated tetravalent

dengue vaccines: The needs and

challenges of post-licensure

evaluation of vaccine safety and

effectiveness

Vaccine. 2017 Oct 9;35(42):5535-5542. doi:

10.1016/j.vaccine

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Longini, Ira Spread of Zika virus in the

Americas.

Proc Natl Acad Sci U S A. 2017 May

30;114(22):E4334-E4343. doi:

10.1073/pnas.1620161114

Longini, Ira Controlling cholera in the Ouest

Department of Haiti using oral

vaccines.

PLoS Negl Trop Dis. 2017 Apr 14;11(4):e0005482.

doi: 10.1371/journal.pntd.0005482

Longini, Ira Efficacy and effectiveness of an

rVSV-vectored vaccine in

preventing Ebola virus disease:

final results from the Guinea

ring vaccination, open-label,

cluster-randomised trial (Ebola

Ça Suffit!).

Lancet. 2017 Feb 4;389(10068):505-518. doi:

10.1016/S0140-6736(16)32621-6

Longini, Ira EFFECT OF EXPOSURE HISTORY

ON DENGUE INFECTION AND

DISEASE: A STATISTICAL

APPROACH AND ITS

APPLICATION TO THE DENGUE

COHORT IN NICARAGUA

Amer J of Trop Med and

Hygiene.2017;97(5):246-247.

Mai, Volker Interactions of Family History of

Breast Cancer with

Radiotherapy in Relation to the

Risk of Breast Cancer

Recurrence.

J Breast Cancer. 2017 Dec;20(4):333-339. doi:

10.4048/jbc.2017.20.4.333

Mai, Volker Low Microbial Diversity and

Abnormal Microbial Succession

Is Associated with Necrotizing

Enterocolitis in Preterm Infants

Front Microbiol. 2017 Nov 15;8:2243. doi:

10.3389/fmicb.2017.02243

Mai, Volker ESPRIT-Forest: Parallel

clustering of massive amplicon

sequence data in subquadratic

time

PLoS Comput Biol. 2017 Apr 24;13(4):e1005518.

doi: 10.1371/journal.pcbi.1005518. eCollection

2017 Apr

Mai, Volker Intestinal dysbiosis in preterm

infants preceding necrotizing

enterocolitis: a systematic

review and meta-analysis.

Microbiome. 2017 Mar 9;5(1):31. doi:

10.1186/s40168-017-0248-8

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Mai, Volker Probiotics (Lactobacillus gasseri

KS-13, Bifidobacterium bifidum

G9-1, and Bifidobacterium

longum MM-2) improve

rhinoconjunctivitis-specific

quality of life in individuals with

seasonal allergies: a double-

blind, placebo-controlled,

randomized trial

Am J Clin Nutr. 2017 Mar;105(3):758-767. doi:

10.3945/ajcn.116.140012

Mai, Volker Diversity and composition of

vaginal microbiota of pregnant

women at risk for transmitting

Group B Streptococcus treated

with intrapartum penicillin.

PLoS One. 2017 Feb 8;12(2):e0169916. doi:

10.1371/journal.pone.0169916

Mai, Volker Prevalence of Escherichia coli

O157:H7 From House Flies

(Diptera: Muscidae) and Dairy

Samples in North Central

Florida1.

J Med Entomol. 2017 May 1;54(3):733-741. doi:

10.1093/jme/tjw205

Mai, Volker Novel encapsulation improves

recovery of probiotic strains in

fecal samples of human

volunteers.

Appl Microbiol Biotechnol. 2017

Feb;101(4):1419-1425. doi: 10.1007/s00253-016-

7915-8

Mai, Volker Dietary Fiber's Contribution to

the Energy Needs of the

Microbiota

FASEB J. 2-17 Apr;31(1)

Mohamadzade

h, Mansour

The major targets of acute

norovirus infection are immune

cells in the gut-associated

lymphoid tissue.

Nat Microbiol. 2017 Dec;2(12):1586-1591. doi:

10.1038/s41564-017-0057-7

Mohamadzade

h, Mansour

Commensal Propionibacterium

strain UF1 mitigates intestinal

inflammation via Th17 cell

regulation.

J Clin Invest. 2017 Nov 1;127(11):3970-3986. doi:

10.1172/JCI95376

Mohamadzade

h, Mansour

Locoregional Effects of

Microbiota in a Preclinical

Model of Colon Carcinogenesis.

Cancer Res. 2017 May 15;77(10):2620-2632. doi:

10.1158/0008-5472.CAN-16-3472

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Mohamadzade

h, Mansour

Gut Dysbiosis Contributes to

Autoimmune Pathogenesis in

Lupus-Prone Mice

Arthritis & Rheumatology.2017 OCT;69(10):1832

Morris, J.

Glenn

Evidence for Mother-to-Child

Transmission of Zika Virus

Through Breast Milk

Clin Infect Dis. 2017 Dec 30. doi:

10.1093/cid/cix968

Morris, J.

Glenn

Corrigendum: A randomized

synbiotic trial to prevent sepsis

among infants in rural India.

Nature. 2017 Nov 29. doi: 10.1038/

Morris, J.

Glenn

Activation of Vibrio cholerae

quorum sensing promotes

survival of an arthropod host.

Nat Microbiol. 2017 Nov 27. doi:

10.1038/s41564-017-0065-7

Morris, J.

Glenn

Complete Genome Sequence of

Human Coronavirus Strain 229E

Isolated from Plasma Collected

from a Haitian Child in 2016.

Genome Announc. 2017 Nov 22;5(47). pii:

e01313-17. doi: 10.1128/genomeA.01313-17

Morris, J.

Glenn

Complete Genomic Sequence of

Dengue Virus Serotype 4

Isolated from Plasma Collected

from a Haitian Child in 2014.

Genome Announc. 2017 Oct 5;5(40). pii: e01160-

17. doi: 10.1128/genomeA.01160-17

Morris, J.

Glenn

Emergence of recombinant

Mayaro virus strains from the

Amazon basin

Sci Rep. 2017 Aug 18;7(1):8718. doi:

10.1038/s41598-017-07152-5

Morris, J.

Glenn

A randomized synbiotic trial to

prevent sepsis among infants in

rural India.

Nature. 2017 Aug 24;548(7668):407-412. doi:

10.1038/nature23480

Morris, J.

Glenn

Complete Genome Sequence of

Dengue virus Type 2 from a

Resident of North-Central

Florida with Locally Transmitted

Dengue Fever

Genome Announc. 2017 Aug 3;5(31). pii:

e00782-17. doi: 10.1128/genomeA.00782-17

Morris, J.

Glenn

Complete Genomic Sequence of

Dengue virus 1, Isolated from

Plasma Collected from a Haitian

Child in 2014.

Genome Announc. 2017 Jun 1;5(22). pii: e00331-

17. doi: 10.1128/genomeA.00331-17

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Morris, J.

Glenn

Complete Genome Sequences

of Identical Zika virus Isolates in

a Nursing Mother and Her

Infant

Genome Announc. 2017 Apr 27;5(17). pii:

e00231-17. doi: 10.1128/genomeA.00231-17

Morris, J.

Glenn

Complete Genome Sequences

of Chikungunya Viruses Isolated

from Plasma Specimens

Collected from Haitians in 2014.

Genome Announc. 2017 Apr 13;5(15). pii:

e00148-17. doi: 10.1128/genomeA.00148-17

Morris, J.

Glenn

Isolation of Coronavirus NL63

from Blood from Children in

Rural Haiti: Phylogenetic

Similarities with Recent Isolates

from Malaysia.

Am J Trop Med Hyg. 2017 Jan 11;96(1):144-147.

doi: 10.4269/ajtmh.16-0585

Morris, J.

Glenn

Coinfection With Zika and

Dengue-2 Viruses in a Traveler

Returning From Haiti, 2016:

Clinical Presentation and

Genetic Analysis

Clin Infect Dis. 2017 Jan 1;64(1):72-75.doi:

10.1093/cid/ciw667

Morris, J.

Glenn

Resilience after the Deepwater

Horizon oil spill

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610.doi:10.1108/DPM-02-2017-0046

Morris, J.

Glenn

Cultural influences behind

cholera transmission in the Far

North Region, Republic of

Cameroon: a field experience

and implications for operational

level planning of interventions

Pan African Med j.2017 Dec

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Okech,

Bernard

Field Trial of the CareStart

Biosensor Analyzer for the

Determination of Glucose-6-

Phosphate Dehydrogenase

Activity in Haiti

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doi: 10.4269/ajtmh.16-0714

Okech,

Bernard

Cross-sectional analysis of the

association between bedtime

and malaria exposure in the

Ouest and Sud-Est Departments

of Haiti.

Acta Trop. 2017 Dec;176:188-191. doi:

10.1016/j.actatropica

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Okech,

Bernard

Submicroscopic malaria

infections in pregnant women

from six departments in Haiti

Trop Med Int Health. 2017 Aug;22(8):1030-1036.

doi: 10.1111/tmi.12909.

Okech,

Bernard

Complete Genomic Sequence of

Dengue virus 1, Isolated from

Plasma Collected from a Haitian

Child in 2014.

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17. doi: 10.1128/genomeA.00331-17

Okech,

Bernard

Complete Genome Sequences

of Chikungunya Viruses Isolated

from Plasma Specimens

Collected from Haitians in 2014.

Genome Announc. 2017 Apr 13;5(15). pii:

e00148-17. doi: 10.1128/genomeA.00148-17

Okech,

Bernard

A Tale of Two Flaviviruses: A

Seroepidemiological Study of

Dengue Virus and West Nile

Virus Transmission in the Ouest

and Sud-Est Departments of

Haiti

Am J Trop Med Hyg. 2017 Jan 11;96(1):135-140.

doi: 10.4269/ajtmh.16-0422

Okech,

Bernard

Isolation of Coronavirus NL63

from Blood from Children in

Rural Haiti: Phylogenetic

Similarities with Recent Isolates

from Malaysia.

Am J Trop Med Hyg. 2017 Jan 11;96(1):144-147.

doi: 10.4269/ajtmh.16-0585

Pascual, David Alternative Strategies for

Vaccination to Brucellosis

Microbes Infect. 2017 Dec 26. pii: S1286-

4579(17)30228-9. doi: 10.1016/j.micinf

Peloquin,

Charles

Erratum for Alsultan et al.,

"Population Pharmacokinetics

of AZD-5847 in Adults with

Pulmonary Tuberculosis".

Antimicrob Agents Chemother. 2017 Dec

21;62(1). pii: e02229-17. doi:

10.1128/AAC.02229-17

Peloquin,

Charles

Reply to Chang et al.,

"Pyrazinamide Is a Two-Edged

Sword: Do WHO Guidelines

Matter?"

Antimicrob Agents Chemother. 2017 Dec

21;62(1). pii: e01937-17. doi:

10.1128/AAC.01937-17

Peloquin,

Charles

Effect of genetic variation of

NAT2 on isoniazid, SLCO1B1,

and CES2 on rifampin

Antimicrob Agents Chemother. 2017 Dec 20. pii:

AAC.02099-17. doi: 10.1128/AAC.02099-17

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pharmacokinetics in Ghanaian

children with tuberculosis

Peloquin,

Charles

Moxifloxacin target site

concentrations in patients with

pulmonary TB utilizing

microdialysis: a clinical

pharmacokinetic study.

J Antimicrob Chemother. 2017 Nov 23. doi:

10.1093/jac/dkx421

Peloquin,

Charles

An optimized background

regimen design to evaluate the

contribution of levofloxacin to

multidrug-resistant tuberculosis

treatment regimens: study

protocol for a randomized

controlled trial.

Trials. 2017 Nov 25;18(1):563. doi:

10.1186/s13063-017-2292-x

Peloquin,

Charles

Verapamil Increases the

Bioavailability and Efficacy of

Bedaquiline but Not Clofazimine

in a Murine Model of

Tuberculosis

Antimicrob Agents Chemother. 2017 Dec

21;62(1). pii: e01692-17. doi:

10.1128/AAC.01692-17

Peloquin,

Charles

Reply to Srivastava et al., "pH

Conditions under Which

Pyrazinamide Works in

Humans".

Antimicrob Agents Chemother. 2017 Aug

24;61(9). pii: e01120-17. doi:

10.1128/AAC.01120-17

Peloquin,

Charles

Rifampin vs. rifapentine: what is

the preferred rifamycin for

tuberculosis?

Expert Rev Clin Pharmacol. 2017

Oct;10(10):1027-1036. doi: 10.1080/17512433

Peloquin,

Charles

Polymyxin Combinations

Combat Escherichia coli

Harboring mcr-1 and blaNDM-5:

Preparation for a Postantibiotic

Era.

MBio. 2017 Jul 25;8(4). pii: e00540-17. doi:

10.1128/mBio.00540-17

Peloquin,

Charles

Population Pharmacokinetics of

AZD-5847 in Adults with

Pulmonary Tuberculosis

Antimicrob Agents Chemother. 2017 Sep

22;61(10). pii: e01066-17. doi:

10.1128/AAC.01066-17

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Peloquin,

Charles

Population

Pharmacokinetics/Pharmacody

namics of 3,4-Diaminopyridine

Free Base in Patients With

Lambert-Eaton Myasthenia

CPT Pharmacometrics Syst Pharmacol. 2017

Sep;6(9):625-634. doi: 10.1002/psp4.12218

Peloquin,

Charles

Population

Pharmacokinetics/Pharmacody

namics of 3,4-Diaminopyridine

Free Base in Patients With

Lambert-Eaton Myasthenia

CPT Pharmacometrics Syst Pharmacol. 2017

Sep;6(9):625-634. doi: 10.1002/psp4.12218

Peloquin,

Charles

Stability of Second-Line

Tuberculosis Medications Mixed

With Milk or Yogurt

Clin Infect Dis. 2017 Aug 15;65(4):704-705. doi:

10.1093/cid/cix434

Peloquin,

Charles

Lung Tissue Concentrations of

Pyrazinamide among Patients

with Drug-Resistant Pulmonary

Tuberculosis.

Antimicrob Agents Chemother. 2017 May

24;61(6). pii: e00226-17. doi:

10.1128/AAC.00226-17

Peloquin,

Charles

Impact of the CYP2C19

genotype on voriconazole

exposure in adults with invasive

fungal infections.

Pharmacogenet Genomics. 2017 May;27(5):190-

196. doi: 10.1097/FPC.0000000000000277

Peloquin,

Charles

Population Pharmacokinetics of

Pyrazinamide in Patients with

Tuberculosis

Antimicrob Agents Chemother. 2017 May

24;61(6). pii: e02625-16. doi:

10.1128/AAC.02625-16

Peloquin,

Charles

Mycobacterium tuberculosis

Infection among Asian

Elephants in Captivity

Emerg Infect Dis. 2017 Mar;23(3):513-516. doi:

10.3201/eid2303.160726

Peloquin,

Charles

Pharmacokinetics and

pharmacodynamics of isoniazid

in patients with intermediate

resistance

Int J Tuberc Lung Dis. 2017 Jan 1;21(1):121-123.

doi: 10.5588/ijtld.16.0689

Peloquin,

Charles

The Role of Therapeutic Drug

Monitoring in Mycobacterial

Infections

Microbiol Spectr. 2017 Jan;5(1). doi:

10.1128/microbiolspec.TNMI7-0029-2016

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Peloquin,

Charles

Pharmacokinetics of the First-

Line Antituberculosis Drugs in

Ghanaian Children with

Tuberculosis with or without

HIV Coinfection

Antimicrob Agents Chemother. 2017 Jan

24;61(2). pii: e01701-16. doi:

10.1128/AAC.01701-16

Peloquin,

Charles

Pharmacokinetics of

Ethionamide Delivered in Spray-

Dried Microparticles to the

Lungs of Guinea Pigs.

J Pharm Sci. 2017 Jan;106(1):331-337. doi:

10.1016/j.xphs.2016.09.033.

Peloquin,

Charles

The pharmacological challenges

of treating tuberculosis and HIV

coinfections.

Expert Rev Clin Pharmacol. 2017 Feb;10(2):213-

223. doi: 10.1080/17512433

Peloquin,

Charles

Therapeutic Drug Monitoring in

Tuberculosis: Practical

Application for Physicians Reply

Clin Infect Dis. 2017 Jan 1;64(1):105-

106.doi:10.1093/cid/ciw679

Pulliam, Juliet Evidence for Mother-to-Child

Transmission of Zika Virus

Through Breast Milk

Clin Infect Dis. 2017 Dec 30. doi:

10.1093/cid/cix968

Pulliam, Juliet Resource-driven encounters

among consumers and

implications for the spread of

infectious disease.

J R Soc Interface. 2017 Oct;14(135). pii:

20170555. doi: 10.1098/rsif.2017.0555

Pulliam, Juliet Complete Genome Sequences

of Identical Zika virus Isolates in

a Nursing Mother and Her

Infant

Genome Announc. 2017 Apr 27;5(17). pii:

e00231-17. doi: 10.1128/genomeA.00231-17

Pulliam, Juliet Understanding and acting on

the developmental origins of

health and disease in Africa

would improve health across

generations

Glob Health Action. 2017;10(1):1334985. doi:

10.1080/16549716.2017.1334985

Qi, Xin Pathogenesis of Diffuse Alveolar

Hemorrhage in Murine Lupus

Arthritis Rheumatol. 2017 Jun;69(6):1280-1293.

doi: 10.1002/art.40077

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Qi, Xin Reduced basal ganglia

adaptability in patients with

diabetic peripheral neuropathy

Diabetes-metabolism Res and Rev.2017

Nov;33(1):695683

Qi, Xin NC1404, a novel derivative of

Bleomycin with modified sugar

moiety obtained during the

preparation of Boningmycin

J of Antibiotics.2017 SEP;70(9):970-

973.doi:10.1038/ja.2017.63

Qi, Xin A novel approach to assess

clinical competence of

postgraduate year 1 surgery

residents

Med Edu Online.2017 Jul 3;

22.doi:10.1080/10872981.2017.1342523

Qi, Xin An improved automated type-

based method for area

assessment of wound surface

Wound Repair and Regeneration.2017

Feb;25(1):150-158.doi:10.1111/wrr.12495

Rheingans,

Richard

Cost-effectiveness of maternal

influenza immunization in

Bamako, Mali: A decision

analysis.

PLoS One. 2017 Feb 7;12(2):e0171499. doi:

10.1371/journal.pone.0171499

Rheingans,

Richard

Determinants of quality of

shared sanitation facilities in

informal settlements: case

study of Kisumu, Kenya.

BMC Public Health. 2017 Jan 11;17(1):68. doi:

10.1186/s12889-016-4009-6

Rheingans,

Richard

Estimating the Cost and

Payment for Sanitation in the

Informal Settlements of Kisumu,

Kenya: A Cross Sectional Study.

Int J Environ Res Public Health. 2017 Jan 6;14(1).

pii: E49. doi: 10.3390/ijerph14010049

Rheingans,

Richard

The effect of costs on Kenyan

households' demand for

medical care: why time and

distance matter.

Health Policy Plan. 2017 Dec 1;32(10):1397-

1406. doi: 10.1093/heapol/czx120

Ryan, Sadie Making ecological models

adequate

Ecol Lett. 2017 Dec 27. doi: 10.1111/ele.12893

Ryan, Sadie Social-ecological factors and

preventive actions decrease the

risk of dengue infection at the

household-level: Results from a

PLoS Negl Trop Dis. 2017 Dec

18;11(12):e0006150. doi:

10.1371/journal.pntd.0006150

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prospective dengue surveillance

study in Machala, Ecuador.

Ryan, Sadie Addressing vulnerability,

building resilience: community-

based adaptation to vector-

borne diseases in the context of

global change.

Infect Dis Poverty. 2017 Dec 11;6(1):166. doi:

10.1186/s40249-017-0375-2

Ryan, Sadie Changing measurements or

changing movements? Sampling

scale and movement model

identifiability across

generations of biologging

technology

Ecol Evol. 2017 Oct 3;7(22):9257-9266. doi:

10.1002/ece3.3461

Ryan, Sadie Quantifying seasonal and diel

variation in Anopheline and

Culex human biting rates in

Southern Ecuador.

Malar J. 2017 Nov 22;16(1):479. doi:

10.1186/s12936-017-2121-4

Ryan, Sadie Outbreak of Zika Virus

Infections, Dominica, 2016.

Emerg Infect Dis. 2017 Nov;23(11):1926-1927.

doi: 10.3201/eid2311.171140

Ryan, Sadie Changing livestock vaccination

policy alters the epidemiology

of human anthrax, Georgia,

2000-2013

Vaccine. 2017 Nov 1;35(46):6283-6289. doi:

10.1016/j.

Ryan, Sadie Detecting the impact of

temperature on transmission of

Zika, dengue, and chikungunya

using mechanistic models.

PLoS Negl Trop Dis. 2017 Apr 27;11(4):e0005568.

doi: 10.1371/journal.pntd.0005568

Ryan, Sadie CHOLERA AND

ENVIRONMENTAL DYNAMICS IN

AN ECUADOREAN ESTUARINE

SYSTEM

Amer J of Trop Med and Hygiene.2017

Nov;95(5):562-563.

Ryan, Sadie deBInfer: Bayesian inference for

dynamical models of biological

systems in R

Methods in Ecology and Evolution.2017

Aor;8(4):511-518.doi:10.1111/2041-210X.12679

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Sabo-Attwood,

Tara

Single-walled carbon nanotubes

modulate pulmonary immune

responses and increase

pandemic influenza a virus

titers in mice.

Virol J. 2017 Dec 22;14(1):242. doi:

10.1186/s12985-017-0909-z.

Sabo-Attwood,

Tara

Overcoming qRT-PCR

interference by select carbon

nanotubes in assessments of

gene expression.

Biotechniques. 2017 Aug 1;63(2):81-84. doi:

10.2144/000114578.

Sabo-Attwood,

Tara

Persistent organic pollutant

emission via dust deposition

throughout Pakistan: Spatial

patterns, regional cycling and

their implication for human

health risks.

Sci Total Environ. 2018 Mar 15;618:829-837. doi:

10.1016/j.scitotenv.2017.08.224.

Sabo-Attwood,

Tara

Estrogen signaling through both

membrane and nuclear

receptors in the liver of fathead

minnow.

Gen Comp Endocrinol. 2017 Jul 18. pii: S0016-

6480(17)30504-X. doi:

10.1016/j.ygcen.2017.07.019

Sabo-Attwood,

Tara

Prediction of delivery of organic

aerosols onto air-liquid

interface cells in vitro using an

electrostatic precipitator

Toxicol In Vitro. 2017 Aug;42:319-328. doi:

10.1016/j.tiv.2017.05.011.

Sabo-Attwood,

Tara

Influence of the Gastrointestinal

Environment on the

Bioavailability of Ethinyl

Estradiol Sorbed to Single-

Walled Carbon Nanotubes.

Environ Sci Technol. 2017 Jan 17;51(2):948-957.

doi: 10.1021/acs.est.6b04728

Sahay, Bikash Induction of IL-10 by Borrelia

burgdorferi is regulated by the

action of CD14-dependent p38-

MAPK and cAMP-mediated

chromatin remodeling.

Infect Immun. 2018 Jan 8. pii: IAI.00781-17. doi:

10.1128/IAI.00781-17

Sahay, Bikash Conserved HIV Epitopes for an

Effective HIV Vaccine.

J Clin Cell Immunol. 2017 Aug;8(4). pii: 518. doi:

10.4172/2155-9899.1000518

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Sahay, Bikash Commensal Propionibacterium

strain UF1 mitigates intestinal

inflammation via Th17 cell

regulation.

J Clin Invest. 2017 Nov 1;127(11):3970-3986. doi:

10.1172/JCI95376.

Salemi, Marco Evidence for Mother-to-Child

Transmission of Zika Virus

Through Breast Milk.

Clin Infect Dis. 2017 Dec 30. doi:

10.1093/cid/cix968.

Salemi, Marco Phylodynamic applications in

21st century global infectious

disease research.

Glob Health Res Policy. 2017 May 8;2:13. doi:

10.1186/s41256-017-0034-y

Salemi, Marco The new Chikungunya virus

outbreak in Italy possibly

originated from a single

introduction from Asia.

Pathog Glob Health. 2017 Nov 28:1-3. doi:

10.1080/20477724.2017.1406565

Salemi, Marco The Spleen Is an HIV-1

Sanctuary During Combined

Antiretroviral Therapy.

AIDS Res Hum Retroviruses. 2018 Jan;34(1):123-

125. doi: 10.1089/AID.2017.0254

Salemi, Marco Complete Genomic Sequence of

Dengue Virus Serotype 4

Isolated from Plasma Collected

from a Haitian Child in 2014.

Genome Announc. 2017 Oct 5;5(40). pii: e01160-

17. doi: 10.1128/genomeA.01160-17

Salemi, Marco Detection of Alphacoronavirus

vRNA in the Feces of Brazilian

Free-Tailed Bats (Tadarida

brasiliensis) from a Colony in

Florida, USA.

Diseases. 2017 Feb 27;5(1). pii: E7. doi:

10.3390/diseases5010007

Salemi, Marco Insights into the Impact of CD8+

Immune Modulation on Human

Immunodeficiency Virus

Evolutionary Dynamics in

Distinct Anatomical

Compartments by Using Simian

Immunodeficiency Virus-

Infected Macaque Models of

AIDS Progression.

J Virol. 2017 Nov 14;91(23). pii: e01162-17. doi:

10.1128/JVI.01162-17.

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Salemi, Marco Emergence of recombinant

Mayaro virus strains from the

Amazon basin.

Sci Rep. 2017 Aug 18;7(1):8718. doi:

10.1038/s41598-017-07152-5.

Salemi, Marco Ranavirus phylogenomics:

Signatures of recombination

and inversions among bullfrog

ranaculture isolates.

Virology. 2017 Nov;511:330-343. doi:

10.1016/j.virol.2017.07.028. Epub 2017 Aug 10

Salemi, Marco Multi-drug resistant Klebsiella

pneumoniae strains circulating

in hospital setting: whole-

genome sequencing and

Bayesian phylogenetic analysis

for outbreak investigations.

Sci Rep. 2017 Jun 14;7(1):3534. doi:

10.1038/s41598-017-03581-4.

Salemi, Marco Complete Genomic Sequence of

Dengue virus 1, Isolated from

Plasma Collected from a Haitian

Child in 2014.

Genome Announc. 2017 Jun 1;5(22). pii: e00331-

17. doi: 10.1128/genomeA.00331-17

Salemi, Marco Fatal Systemic Salmonellosis in

a Florida Manatee ( Trichechus

manatus latirostris).

J Wildl Dis. 2017 Oct;53(4):930-933. doi:

10.7589/2017-01-012

Salemi, Marco

Complete Genome Sequences

of Identical Zika virus Isolates in

a Nursing Mother and Her

Infant

Genome Announc. 2017 Apr 27;5(17). pii:

e00231-17. doi: 10.1128/genomeA.00231-17

Salemi, Marco A method for obtaining simian

immunodeficiency virus RNA

sequences from laser capture

microdissected and immune

captured CD68+ and CD163+

macrophages from frozen tissue

sections of bone marrow and

brain.

J Immunol Methods. 2017 Mar;442:59-63. doi:

10.1016/j.jim.2017.01.003.

Scheurger,

Andrew

Magnesium Sulfate Salt

Solutions and Ices Fail to

Protect Serratia liquefaciens

from the Biocidal Effects of UV

Irradiation under Martian

Conditions

Astrobiology. 2017 May;17(5):401-412. doi:

10.1089/ast.2015.1448

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Schweizer,

Herbert

Burkholderia pseudomallei

natural competency and DNA

catabolism: Identification and

characterization of relevant

genes from a constructed

fosmid library.

PLoS One. 2017 Dec 18;12(12):e0189018. doi:

10.1371/journal.pone.0189018

Schweizer,

Herbert

Spatial transcriptomes within

the Pseudomonas aeruginosa

biofilm architecture.

Mol Microbiol. 2017 Dec;106(6):976-985. doi:

10.1111/mmi.13863

Schweizer,

Herbert

Mechanisms of Resistance to

Folate Pathway Inhibitors in

Burkholderia pseudomallei:

Deviation from the Norm.

MBio. 2017 Sep 5;8(5). pii: e01357-17. doi:

10.1128/mBio.01357-17

Schweizer,

Herbert

Genome-scale analysis of the

genes that contribute to

Burkholderia pseudomallei

biofilm formation identifies a

crucial exopolysaccharide

biosynthesis gene cluster.

PLoS Negl Trop Dis. 2017 Jun 28;11(6):e0005689.

doi: 10.1371/journal.pntd.0005689

Schweizer,

Herbert

An avirulent Burkholderia

pseudomallei ∆purM strain with

atypical type B LPS: expansion

of the toolkit for biosafe studies

of melioidosis

BMC Microbiol. 2017 Jun 7;17(1):132. doi:

10.1186/s12866-017-1040-4.

Schweizer,

Herbert

Structural diversity of

Burkholderia pseudomallei

lipopolysaccharides affects

innate immune signaling.

PLoS Negl Trop Dis. 2017 Apr 28;11(4):e0005571.

doi: 10.1371/journal.pntd.0005571

Schweizer,

Herbert

Antibiotic Resistance Markers in

Burkholderia pseudomallei

Strain Bp1651 Identified by

Genome Sequence Analysis.

Antimicrob Agents Chemother. 2017 May

24;61(6). pii: e00010-17. doi:

10.1128/AAC.00010-17

Schweizer,

Herbert

Finafloxacin overcomes

Burkholderia pseudomallei

efflux-mediated

fluoroquinolone resistance

J Antimicrob Chemother. 2017 Apr 1;72(4):1258-

1260. doi: 10.1093/jac/dkw529

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Schweizer,

Herbert

Thermoregulation of Biofilm

Formation in Burkholderia

pseudomallei Is Disrupted by

Mutation of a Putative

Diguanylate Cyclase.

J Bacteriol. 2017 Feb 14;199(5). pii: e00780-16.

doi: 10.1128/JB.00780-16

Stacy, Brian Evidence of Diversity, Site, and

Host Specificity of Sea Turtle

Blood Flukes (Digenea:

Schistosomatoidea:

"Spirorchiidae"): A Molecular

Prospecting Study.

J Parasitol. 2017 Dec;103(6):756-767. doi:

10.1645/16-31

Stacy, Brian Defining risk variables causing

gas embolism in loggerhead sea

turtles (Caretta caretta) caught

in trawls and gillnets.

Sci Rep. 2017 Jun 1;7(1):2739. doi:

10.1038/s41598-017-02819-5

Stacy, Brian Elucidation of the first

definitively identified life cycle

for a marine turtle blood fluke

(Trematoda: Spirorchiidae)

enables informed control.

Int J Parasitol. 2017 Jan;47(1):61-67. doi:

10.1016/j.ijpara.2016.11.002

Stacy, Brian Estimating sea turtle exposures

to Deepwater Horizon oil

Endangered Species Research. 2017;33:51-67.

doi:10.3354/esr00728

Stacy, Brian Density and exposure of

surface-pelagic juvenile sea

turtles to Deepwater Horizon oil

Endangered Species Research.2017;33:69-

82.doi:10.3354/esr00771

Sulakvelidze,

Alexander

Bacteriophage preparation lytic

for Shigella significantly reduces

Shigella sonnei contamination

in various foods.

PLoS One. 2017 Mar 31;12(3):e0175256. doi:

10.1371/journal.pone.0175256

Tuanyok,

Apichai

An avirulent Burkholderia

pseudomallei ∆purM strain with

atypical type B LPS: expansion

of the toolkit for biosafe studies

of melioidosis.

BMC Microbiol. 2017 Jun 7;17(1):132. doi:

10.1186/s12866-017-1040-4

Tuanyok,

Apichai

Structural diversity of

Burkholderia pseudomallei

PLoS Negl Trop Dis. 2017 Apr 28;11(4):e0005571.

doi: 10.1371/journal.pntd.0005571

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lipopolysaccharides affects

innate immune signaling.

Tuanyok,

Apichai

Antibiotic Resistance Markers in

Burkholderia pseudomallei

Strain Bp1651 Identified by

Genome Sequence Analysis.

Antimicrob Agents Chemother. 2017 May

24;61(6). pii: e00010-17. doi:

10.1128/AAC.00010-17

Tuanyok,

Apichai

Multitarget Quantitative PCR

Improves Detection and

Predicts Cultivability of the

Pathogen Burkholderia

pseudomallei.

Appl Environ Microbiol. 2017 Mar 31;83(8). pii:

e03212-16. doi: 10.1128/AEM.03212-16

Tuanyok,

Apichai

Global and regional

dissemination and evolution of

Burkholderia pseudomallei

Nat Microbiol. 2017 Jan 23;2:16263. doi:

10.1038/nmicrobiol.2016.263

Tuanyok,

Apichai

Development of Immunoassays

for Burkholderia pseudomallei

Typical and Atypical

Lipopolysaccharide Strain

Typing.

Am J Trop Med Hyg. 2017 Feb 8;96(2):358-367.

doi: 10.4269/ajtmh.16-0308

Tuanyok,

Apichai

Burkholderia humptydooensis

sp. nov., a New Species Related

to Burkholderia thailandensis

and the Fifth Member of the

Burkholderia pseudomallei

Complex.

Appl Environ Microbiol. 2017 Feb 15;83(5). pii:

e02802-16. doi: 10.1128/AEM.02802-16

Tuanyok,

Apichai

Phylogeographic, genomic, and

meropenem susceptibility

analysis of Burkholderia

ubonensis

PLoS Negl Trop Dis. 2017 Sep 14;11(9):e0005928.

doi: 10.1371/journal.pntd.0005928

Ukhanova,

Maria

Probiotics (Lactobacillus gasseri

KS-13, Bifidobacterium bifidum

G9-1, and Bifidobacterium

longum MM-2) improve

rhinoconjunctivitis-specific

quality of life in individuals with

seasonal allergies: a double-

Am J Clin Nutr. 2017 Mar;105(3):758-767. doi:

10.3945/ajcn.116.140012

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blind, placebo-controlled,

randomized trial.

Ukhanova,

Maria

Novel encapsulation improves

recovery of probiotic strains in

fecal samples of human

volunteers.

Appl Microbiol Biotechnol. 2017

Feb;101(4):1419-1425. doi: 10.1007/s00253-016-

7915-8

Ukhanova,

Maria

Effects of sun-dried raisin

consumption on gut microbiota

composition

FASEB J.2017 Apr;31(965.7)

Varsani, Arvind Nanovirus-alphasatellite

complex identified in Vicia

cracca in the Rhône delta region

of France

Arch Virol. 2017 Nov 20. doi: 10.1007/s00705-

017-3634-4

Varsani, Arvind Molecular characterization of

faba bean necrotic yellows

viruses in Tunisia

Arch Virol. 2017 Nov 17. doi: 10.1007/s00705-

017-3651-3.

Varsani, Arvind Identification of an anellovirus

and genomoviruses in ixodid

ticks

Virus Genes. 2017 Nov 15. doi: 10.1007/s11262-

017-1520-5

Varsani, Arvind Viruses associated with

Antarctic wildlife: From

serology based detection to

identification of genomes using

high throughput sequencing.

Virus Res. 2018 Jan 2;243:91-105. doi:

10.1016/j.virusres.2017.10.017.

Varsani, Arvind Geometagenomics illuminates

the impact of agriculture on the

distribution and prevalence of

plant viruses at the ecosystem

scale

ISME J. 2018 Jan;12(1):173-184. doi:

10.1038/ismej.2017.155

Varsani, Arvind Unique genome organization of

non-mammalian

papillomaviruses provides

insights into the evolution of

viral early proteins.

Virus Evol. 2017 Oct 6;3(2):vex027. doi:

10.1093/ve/vex027

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Varsani, Arvind Discovery of the first maize-

infecting mastrevirus in the

Americas using a vector-

enabled metagenomics

approach.

Arch Virol. 2018 Jan;163(1):263-267. doi:

10.1007/s00705-017-3571-2

Varsani, Arvind A novel geminivirus identified in

tomato and cleome plants

sampled in Brazil.

Virus Res. 2017 Aug 15;240:175-179. doi:

10.1016/j.virusres.2017.08.007

Varsani, Arvind ICTV Virus Taxonomy Profile:

Circoviridae

J Gen Virol. 2017 Aug;98(8):1997-1998. doi:

10.1099/jgv.0.000871

Varsani, Arvind Genome Sequence of a

Podovirus (AAPEc6) Isolated

from Wastewater in New

Zealand That Infects Escherichia

coli O45:H10

Genome Announc. 2017 Aug 3;5(31). pii:

e00462-17. doi: 10.1128/genomeA.00462-17

Varsani, Arvind Occurrence of a novel

mastrevirus in sugarcane

germplasm collections in

Florida, Guadeloupe and

Réunion.

Virol J. 2017 Jul 28;14(1):146. doi:

10.1186/s12985-017-0810-9

Varsani, Arvind Diverse and highly recombinant

anelloviruses associated with

Weddell seals in Antarctica.

Virus Evol. 2017 Jul 19;3(1):vex017. doi:

10.1093/ve/vex017

Varsani, Arvind Molecular diversity, geographic

distribution and host range of

monocot-infecting

mastreviruses in Africa and

surrounding islands.

Virus Res. 2017 Jun 15;238:171-178. doi:

10.1016/j.virusres.2017.07.001.

Varsani, Arvind Novel mastreviruses identified

in Australian wild rice.

Virus Res. 2017 Jun 15;238:193-197. doi:

10.1016/j.virusres.2017.07.003

Varsani, Arvind Genomovirus Genomes

Recovered from Echinothrips

americanus Sampled in Florida,

USA.

Genome Announc. 2017 May 25;5(21). pii:

e00445-17. doi: 10.1128/genomeA.00445-17.

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Varsani, Arvind Sequence-based taxonomic

framework for the classification

of uncultured single-stranded

DNA viruses of the family

Genomoviridae.

Virus Evol. 2017 Feb 2;3(1):vew037. doi:

10.1093/ve/vew037.

Varsani, Arvind Changes to taxonomy and the

International Code of Virus

Classification and Nomenclature

ratified by the International

Committee on Taxonomy of

Viruses (2017).

Arch Virol. 2017 Aug;162(8):2505-2538. doi:

10.1007/s00705-017-3358-5

Varsani, Arvind Identification of a Nanovirus-

Alphasatellite Complex in

Sophora alopecuroides

Virus Res. 2017 May 2;235:24-32. doi:

10.1016/j.virusres.2017.03.023

Varsani, Arvind Genome Sequence of

Cauliflower Mosaic Virus

Identified in Earwigs (Doru

luteipes) through a

Metagenomic Approach.

Genome Announc. 2017 Mar 16;5(11). pii:

e00043-17. doi: 10.1128/genomeA.00043-17

Varsani, Arvind Tracking effluent discharges in

undisturbed stony soil and

alluvial gravel aquifer using

synthetic DNA tracers.

Sci Total Environ. 2017 Aug 15;592:144-152. doi:

10.1016/j.scitotenv.2017.03.072

Varsani, Arvind ICTV Virus Taxonomy Profile:

Geminiviridae.

J Gen Virol. 2017 Feb;98(2):131-133. doi:

10.1099/jgv.0.000738.

Varsani, Arvind Genome sequences of a

capulavirus infecting Plantago

lanceolata in the Åland

archipelago of Finland.

Arch Virol. 2017 Jul;162(7):2041-2045. doi:

10.1007/s00705-017-3298-0

Varsani, Arvind Novel Single-Stranded DNA

Virus Genomes Recovered from

Chimpanzee Feces Sampled

from the Mambilla Plateau in

Nigeria.

Genome Announc. 2017 Mar 2;5(9). pii: e01715-

16. doi: 10.1128/genomeA.01715-16

Varsani, Arvind Genome Sequences of Beet

curly top Iran virus, Oat dwarf

virus, Turnip curly top virus, and

Genome Announc. 2017 Feb 23;5(8). pii: e01674-

16. doi: 10.1128/genomeA.01674-16

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Wheat dwarf virus Identified in

Leafhoppers.

Varsani, Arvind New strains of chickpea

chlorotic dwarf virus discovered

on diseased papaya and tomato

plants in Burkina Faso.

Arch Virol. 2017 Jun;162(6):1791-1794. doi:

10.1007/s00705-017-3262-z.

Varsani, Arvind Capulavirus and Grablovirus:

two new genera in the family

Geminiviridae

Arch Virol. 2017 Jun;162(6):1819-1831. doi:

10.1007/s00705-017-3268-6

Varsani, Arvind The role of Kenya in the trans-

African spread of maize streak

virus strain A.

Virus Res. 2017 Mar 15;232:69-76. doi:

10.1016/j.virusres.2017.02.005

Varsani, Arvind 50 years of the International

Committee on Taxonomy of

Viruses: progress and prospects.

Arch Virol. 2017 May;162(5):1441-1446. doi:

10.1007/s00705-016-3215-y

Varsani, Arvind Evolutionary history of ssDNA

bacilladnaviruses features

horizontal acquisition of the

capsid gene from ssRNA

nodaviruses.

Virology. 2017 Apr;504:114-121. doi:

10.1016/j.virol.2017.02.001

Varsani, Arvind Revisiting the taxonomy of the

family Circoviridae:

establishment of the genus

Cyclovirus and removal of the

genus Gyrovirus.

Arch Virol. 2017 May;162(5):1447-1463. doi:

10.1007/s00705-017-3247-y

Varsani, Arvind Consensus statement: Virus

taxonomy in the age of

metagenomics.

Nat Rev Microbiol. 2017 Mar;15(3):161-168. doi:

10.1038/nrmicro.2016.177

Varsani, Arvind Identification of a polyomavirus

in Weddell seal (Leptonychotes

weddellii) from the Ross Sea

(Antarctica).

Arch Virol. 2017 May;162(5):1403-1407. doi:

10.1007/s00705-017-3239-y.

Varsani, Arvind Complete Genome Sequence of

a Genomovirus Associated with

Genome Announc. 2016 Nov 10;4(6). pii:

e01247-16. doi: 10.1128/genomeA.01247-16

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Common Bean Plant Leaves in

Brazil.

Varsani, Arvind Comparative analysis of

common regions found in

babuviruses and alphasatellite

molecules

Arch Virol. 2017 Mar;162(3):849-855. doi:

10.1007/s00705-016-3168-1

Varsani, Arvind Possibility and Challenges of

Conversion of Current Virus

Species Names to Linnaean

Binomials

Syst Biol. 2017 May 1;66(3):463-473. doi:

10.1093/sysbio/syw096

Vittor, Amy Deforestation and vector-borne

disease: Forest conversion

favors important mosquito

vectors of human pathogens

https://doi.org/10.1016/j.baae.2017.09.012

Vittor, Amy Does deforestation promote or

inhibit malaria transmission in

the Amazon? A systematic

literature review and critical

appraisal of current evidence

Philos Trans R Soc Lond B Biol Sci. 2017 Jun

5;372(1722). pii: 20160125. doi:

10.1098/rstb.2016.0125

Waltzek,

Thomas

Complete Genome Sequence of

Human Coronavirus Strain 229E

Isolated from Plasma Collected

from a Haitian Child in 2016.

Genome Announc. 2017 Nov 22;5(47). pii:

e01313-17. doi: 10.1128/genomeA.01313-17

Waltzek,

Thomas

Genomic Sequences of

Epizootic Hemorrhagic Disease

Viruses Isolated from Florida

White-Tailed Deer.

Genome Announc. 2017 Oct 26;5(43). pii:

e01174-17. doi: 10.1128/genomeA.01174-17

Waltzek,

Thomas

Fecal bacterial communities of

wild-captured and stranded

green turtles (Chelonia mydas)

on the Great Barrier Reef.

FEMS Microbiol Ecol. 2017 Dec 1;93(12). doi:

10.1093/femsec/fix139.

Waltzek,

Thomas

Genome Sequence of an

Alphaherpesvirus from a Beluga

Whale (Delphinapterus leucas).

Genome Announc. 2017 Oct 19;5(42). pii:

e01100-17. doi: 10.1128/genomeA.01100-17

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Waltzek,

Thomas

Genomic Sequencing of

Ranaviruses Isolated from

Edible Frogs (Pelophylax

esculentus).

Genome Announc. 2017 Sep 21;5(38). pii:

e01015-17. doi: 10.1128/genomeA.01015-17

Waltzek,

Thomas

Molecular epidemiology of

Epizootic haematopoietic

necrosis virus (EHNV).

Virology. 2017 Nov;511:320-329. doi:

10.1016/j.virol.2017.07.029

Waltzek,

Thomas

Genomic characterization of a

novel calicivirus, FHMCV-2012,

from baitfish in the USA.

Arch Virol. 2017 Dec;162(12):3619-3627. doi:

10.1007/s00705-017-3519-6.

Waltzek,

Thomas

Ranavirus phylogenomics:

Signatures of recombination

and inversions among bullfrog

ranaculture isolates

Virology. 2017 Nov;511:330-343. doi:

10.1016/j.virol.2017.07.028

Waltzek,

Thomas

Genome Sequence of a

Gammaherpesvirus from a

Common Bottlenose Dolphin

(Tursiops truncatus).

Genome Announc. 2017 Aug 3;5(31). pii:

e00777-17. doi: 10.1128/genomeA.00777-17

Waltzek,

Thomas

Ranaviruses and other

members of the family

Iridoviridae: Their place in the

virosphere.

Virology. 2017 Nov;511:259-271. doi:

10.1016/j.virol.2017.06.007

Waltzek,

Thomas

Diversity of Veronaea botryosa

from different hosts and

evaluation of laboratory

challenge models for

phaeohyphomycosis in

Acipenser transmontanus.

Dis Aquat Organ. 2017 Jun 19;125(1):7-18. doi:

10.3354/dao03134.

Waltzek,

Thomas

ICTV Virus Taxonomy Profile:

Iridoviridae.

J Gen Virol. 2017 May;98(5):890-891. doi:

10.1099/jgv.0.000818

Waltzek,

Thomas

Fatal Systemic Salmonellosis in

a Florida Manatee ( Trichechus

manatus latirostris).

J Wildl Dis. 2017 Oct;53(4):930-933. doi:

10.7589/2017-01-012

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Waltzek,

Thomas

A novel cetacean adenovirus in

stranded harbour porpoises

from the North Sea: detection

and molecular characterization.

Arch Virol. 2017 Jul;162(7):2035-2040. doi:

10.1007/s00705-017-3310-8

Waltzek,

Thomas

Development of a PCR assay to

detect cyprinid herpesvirus 1 in

koi and common carp

Dis Aquat Organ. 2017 Feb 8;123(1):19-27. doi:

10.3354/dao03066

Waltzek,

Thomas

Development and validation of

a quantitative PCR for rapid and

specific detection of California

sea lion adenovirus 1 and

prevalence in wild and managed

populations.

J Vet Diagn Invest. 2017 Mar;29(2):193-197. doi:

10.1177/1040638716689113

Waltzek,

Thomas

Molecular characterization of a

novel orthomyxovirus from

rainbow and steelhead trout

(Oncorhynchus mykiss).

Virus Res. 2017 Feb 15;230:38-49. doi:

10.1016/j.virusres.2017.01.005

Waltzek,

Thomas

EVALUATION OF DIFFERENT

VIRAL ENRICHMENT METHODS

FOR WEST NILE VIRUS RNA

EXTRACTION IN BRAIN

Amer J of Trop Med and Hygeine.2017

NOV;95(5):46

Wellehan,

James

Antemortem Diagnosis of

Coxiellosis in a Blue and Gold

Macaw ( Ara ararauna).

J Avian Med Surg. 2017 Dec;31(4):364-372. doi:

10.1647/2016-224

Wellehan,

James

EXTENSION OF THE KNOWN

HOST RANGE OF

INTRANUCLEAR COCCIDIOSIS:

INFECTION IN THREE CAPTIVE

RED-FOOTED TORTOISES (

CHELONOIDIS CARBONARIA).

J Zoo Wildl Med. 2017 Dec;48(4):1165-1171. doi:

10.1638/2017-0068.1.

Wellehan,

James

Determination of the diversity

of astroviruses in feces from

cats in Florida.

J Vet Diagn Invest. 2018 Mar;30(2):275-279. doi:

10.1177/1040638717747322

Wellehan,

James

PHYLOGENETIC ANALYSIS OF

THE GENOME OF AN ENTERITIS-

ASSOCIATED BOTTLENOSE

DOLPHIN MASTADENOVIRUS

J Wildl Dis. 2018 Jan;54(1):112-121. doi:

10.7589/2017-03-052

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SUPPORTS A CLADE INFECTING

THE CETARTIODACTYLA.

Wellehan,

James

Infection with a novel

derogenid trematode in a Flap-

necked chameleon (Chamaeleo

dilepis).

Vet Clin Pathol. 2017 Dec;46(4):629-634. doi:

10.1111/vcp.12537

Wellehan,

James

Cutaneous iridophoroma in a

Green iguana (Iguana iguana).

Vet Clin Pathol. 2017 Dec;46(4):625-628. doi:

10.1111/vcp.12536

Wellehan,

James

Bacterial recovery using

sonication versus swabbing of

titanium and stainless steel

implants inoculated with

Staphylococcus

pseudintermedius or

Pseudomonas aeruginosa.

Vet Comp Orthop Traumatol. 2017 Sep

12;30(5):346-350. doi: 10.3415/VCOT-17-02-

0031

Wellehan,

James

GRANULOMATOUS

ENCEPHALOMYELITIS IN A

FALSE GHARIAL (TOMISTOMA

SCHLEGELII) ASSOCIATED WITH

A NOVEL CHLAMYDIA SPECIES.

J Zoo Wildl Med. 2017 Jun;48(2):563-567. doi:

10.1638/2016-0187R.1.

Wellehan,

James

Development of a quantitative

PCR assay for measurement of

trichechid herpesvirus 1 load in

the Florida manatee (

Trichechus manatus latirostris).

J Vet Diagn Invest. 2017 Jul;29(4):476-482. doi:

10.1177/1040638717707554

Wellehan,

James

INTRAMUSCULAR EPINEPHRINE

RESULTS IN REDUCED

ANESTHETIC RECOVERY TIME IN

AMERICAN ALLIGATORS

(ALLIGATOR MISSISSIPPIENSIS)

UNDERGOING ISOFLURANE

ANESTHESIA.

J Zoo Wildl Med. 2017 Mar;48(1):55-61. doi:

10.1638/2015-0293.1

Wellehan,

James

A novel cetacean adenovirus in

stranded harbour porpoises

from the North Sea: detection

and molecular characterization.

Arch Virol. 2017 Jul;162(7):2035-2040. doi:

10.1007/s00705-017-3310-8.

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Wellehan,

James

Development and validation of

a quantitative PCR for rapid and

specific detection of California

sea lion adenovirus 1 and

prevalence in wild and managed

populations.

J Vet Diagn Invest. 2017 Mar;29(2):193-197. doi:

10.1177/1040638716689113

Wisely,

Samantha

Evidence of Pseudorabies Virus

Shedding in Feral Swine (Sus

scrofa) Populations of Florida,

USA.

J Wildl Dis. 2017 Oct 5. doi: 10.7589/2017-04-

071

Wisely,

Samantha

Ranavirus phylogenomics:

Signatures of recombination

and inversions among bullfrog

ranaculture isolates.

Virology. 2017 Nov;511:330-343. doi:

10.1016/j.virol.2017.07.028

Wisely,

Samantha

Development of a rapid, simple,

and specific real-time PCR assay

for detection of pseudorabies

viral DNA in domestic swine

herds.

J Vet Diagn Invest. 2017 Jul;29(4):522-528. doi:

10.1177/1040638717706593

Wisely,

Samantha

Assessing the utility of

metabarcoding for diet analyses

of the omnivorous wild pig (Sus

scrofa)

Ecol Evol. 2017 Nov 26;8(1):185-196. doi:

10.1002/ece3.3638

Wisely,

Samantha

Genomic Sequences of

Epizootic Hemorrhagic Disease

Viruses Isolated from Florida

White-Tailed Deer.

Genome Announc. 2017 Oct 26;5(43). pii:

e01174-17. doi: 10.1128/genomeA.01174-17

Wisely,

Samantha

EVIDENCE OF PSEUDORABIES

VIRUS SHEDDING IN FERAL

SWINE ( SUS SCROFA)

POPULATIONS OF FLORIDA,

USA.

J Wildl Dis. 2018 Jan;54(1):45-53. doi:

10.7589/2017-04-071

Wisely,

Samantha

Ranavirus phylogenomics:

Signatures of recombination

and inversions among bullfrog

ranaculture isolates.

Virology. 2017 Nov;511:330-343. doi:

10.1016/j.virol.2017.07.028.

Wisely,

Samantha

Quantifying drivers of wild pig

movement across multiple

spatial and temporal scales

Mov Ecol. 2017 Jun 15;5:14. doi:

10.1186/s40462-017-0105-1

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Wisely,

Samantha

Development of a rapid, simple,

and specific real-time PCR assay

for detection of pseudorabies

viral DNA in domestic swine

herds

J Vet Diagn Invest. 2017 Jul;29(4):522-528. doi:

10.1177/1040638717706593

Wisely,

Samantha

Raccoons (Procyon lotor) as

Sentinels of Trace Element

Contamination and

Physiological Effects of

Exposure to Coal Fly Ash

Arch Environ Contam Toxicol. 2017

Feb;72(2):235-246. doi: 10.1007/s00244-016-

0340-2

Yang, Yang Controlling cholera in the Ouest

Department of Haiti using oral

vaccines.

PLoS Negl Trop Dis. 2017 Apr 14;11(4):e0005482.

doi: 10.1371/journal.pntd.0005482

Yang, Yang Mapping the distribution of

tick-borne encephalitis in

mainland China.

Ticks Tick Borne Dis. 2017 Jun;8(4):631-639. doi:

10.1016/j.ttbdis.2017.04.009

Yang, Yang Reply to Aguiar and

Stollenwerk.

Clin Infect Dis. 2018 Feb 1;66(4):642. doi:

10.1093/cid/cix883.

Yang, Yang Rapid increase of scrub typhus

incidence in Guangzhou,

southern China, 2006-2014.

BMC Infect Dis. 2017 Jan 5;17(1):13. doi:

10.1186/s12879-016-2153-3.