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On the Stability of Periodic Solutions in the Perturbed Chemostat MICHAEL MALISOFF Department of Mathematics Louisiana State University Joint work with Fr´ ed´ eric Mazenc (INRIA-INRA) and Patrick De Leenheer (University of FL) SIAM Minisymposium on Mathematical Modeling of Complex Systems in Biology I AMS Joint Meetings, New Orleans, LA, January 6, 2007

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On the Stability of Periodic Solutionsin the Perturbed Chemostat

MICHAEL MALISOFFDepartment of MathematicsLouisiana State University

Joint work withFrederic Mazenc(INRIA-INRA)andPatrick De Leenheer(University of FL)

SIAM Minisymposium on Mathematical Modelingof Complex Systems in Biology I

AMS Joint Meetings, New Orleans, LA, January 6, 2007

GENERAL n SPECIES CHEMOSTAT MODEL

S = D(S0 − S)−n∑

i=1

µi(S)xi/γi; xi = xi(µi(S)−D) (Σn)

xi = concentration ofith species,S = concentration of limiting nutrient,

µi = ith per-capita growth rate,γi ∈ (0, 1) = constantith yield factor.

Controls:dilution rateD and input nutrient concentrationS0.

GENERAL n SPECIES CHEMOSTAT MODEL

S = D(S0 − S)−n∑

i=1

µi(S)xi/γi; xi = xi(µi(S)−D) (Σn)

xi = concentration ofith species,S = concentration of limiting nutrient,

µi = ith per-capita growth rate,γi ∈ (0, 1) = constantith yield factor.

Controls:dilution rateD and input nutrient concentrationS0.

Derivation:Use mass-balance equations for total amounts of nutrient and

each of the species, assuming the reactor content is well-mixed.

GENERAL n SPECIES CHEMOSTAT MODEL

S = D(S0 − S)−n∑

i=1

µi(S)xi/γi; xi = xi(µi(S)−D) (Σn)

xi = concentration ofith species,S = concentration of limiting nutrient,

µi = ith per-capita growth rate,γi ∈ (0, 1) = constantith yield factor.

Controls:dilution rateD and input nutrient concentrationS0.

Derivation:Use mass-balance equations for total amounts of nutrient and

each of the species, assuming the reactor content is well-mixed.

Importance:Chemostat models provide the foundation for much of

current research inbioengineering, ecology, andpopulation biology.

GENERAL n SPECIES CHEMOSTAT MODEL

S = D(S0 − S)−n∑

i=1

µi(S)xi/γi; xi = xi(µi(S)−D) (Σn)

xi = concentration ofith species,S = concentration of limiting nutrient,

µi = ith per-capita growth rate,γi ∈ (0, 1) = constantith yield factor.

Controls:dilution rateD and input nutrient concentrationS0.

Derivation:Use mass-balance equations for total amounts of nutrient and

each of the species, assuming the reactor content is well-mixed.

Importance:Chemostat models provide the foundation for much of

current research inbioengineering, ecology, andpopulation biology.

Competitive Exclusion:WhenS0 andD are constant and theµi’s are

increasing,at most one species survives. (There is a steady state with at

most one nonzero species concentration, which attracts a.a. solutions.)

OVERVIEW of LITERATURE

Coexistence:In real ecological systems,many species can coexist, so

much of the literature aims at choosingS0 and/orD to force coexistence.

“The Paradox of the plankton,” Hutchinson,American Naturalist, 1961.

OVERVIEW of LITERATURE

Coexistence:In real ecological systems,many species can coexist, so

much of the literature aims at choosingS0 and/orD to force coexistence.

“The Paradox of the plankton,” Hutchinson,American Naturalist, 1961.

Time-Varying Controls:Have competitive exclusion ifn = 2 and one of

the controls is fixed and the other is periodic. See Hal Smith (SIAP’81),

Hale-Somolinos (JMB’83), Butler-Hsu-Waltman (SIAP’85).

OVERVIEW of LITERATURE

Coexistence:In real ecological systems,many species can coexist, so

much of the literature aims at choosingS0 and/orD to force coexistence.

“The Paradox of the plankton,” Hutchinson,American Naturalist, 1961.

Time-Varying Controls:Have competitive exclusion ifn = 2 and one of

the controls is fixed and the other is periodic. See Hal Smith (SIAP’81),

Hale-Somolinos (JMB’83), Butler-Hsu-Waltman (SIAP’85).

State-Dependent Controls:A feedback control perspective based on

mathematical control theorywas pursued e.g. in De Leenheer-Smith

(JMB’03) to generate a coexistence equilibrium forn = 2, 3.

OVERVIEW of LITERATURE

Coexistence:In real ecological systems,many species can coexist, so

much of the literature aims at choosingS0 and/orD to force coexistence.

“The Paradox of the plankton,” Hutchinson,American Naturalist, 1961.

Time-Varying Controls:Have competitive exclusion ifn = 2 and one of

the controls is fixed and the other is periodic. See Hal Smith (SIAP’81),

Hale-Somolinos (JMB’83), Butler-Hsu-Waltman (SIAP’85).

State-Dependent Controls:A feedback control perspective based on

mathematical control theorywas pursued e.g. in De Leenheer-Smith

(JMB’03) to generate a coexistence equilibrium forn = 2, 3.

Intra-Specific Competition:This can be modeled with growth rates

µi(S, xi) that decrease inxi. See Mazenc-Lobry-Rapaport (EJDE’07),

Grognard-Mazenc-Rapaport (DCDS’07).

OUR WORK for ONE SPECIES CASE

TakingS0 to be constant and rescaling gives

S = D(1− S)− µ(S)x, x = x(µ(S)−D) (Σ1)

evolving onX = (0,∞)2. We assume a Monod growth rate

µ(S) =mS

a + S, m > 4a + 1 . (G)

OUR WORK for ONE SPECIES CASE

TakingS0 to be constant and rescaling gives

S = D(1− S)− µ(S)x, x = x(µ(S)−D) (Σ1)

evolving onX = (0,∞)2. We assume a Monod growth rate

µ(S) =mS

a + S, m > 4a + 1 . (G)

Summary of Our Work:

• Instead of studying coexistence, we prove thestabilityof aprescribed

periodic solutionusing a Lyapunov-type analysis; i.e.,tracking.

OUR WORK for ONE SPECIES CASE

TakingS0 to be constant and rescaling gives

S = D(1− S)− µ(S)x, x = x(µ(S)−D) (Σ1)

evolving onX = (0,∞)2. We assume a Monod growth rate

µ(S) =mS

a + S, m > 4a + 1 . (G)

Summary of Our Work:

• Instead of studying coexistence, we prove thestabilityof aprescribed

periodic solutionusing a Lyapunov-type analysis; i.e.,tracking.

• Lyapunov functions are useful for robustness analysis but have

infrequently been used in chemostat research.

OUR WORK for ONE SPECIES CASE

TakingS0 to be constant and rescaling gives

S = D(1− S)− µ(S)x, x = x(µ(S)−D) (Σ1)

evolving onX = (0,∞)2. We assume a Monod growth rate

µ(S) =mS

a + S, m > 4a + 1 . (G)

Summary of Our Work:

• Instead of studying coexistence, we prove thestabilityof aprescribed

periodic solutionusing a Lyapunov-type analysis; i.e.,tracking.

• Lyapunov functions are useful for robustness analysis but have

infrequently been used in chemostat research.

• Most chemostat/Lyapunov results usenonstrictLyapunov functions

and LaSalle invariance which are not suited to robustness analysis.

MAIN TRACKING RESULT for Σ1

Statement of Main Tracking Result: Given any componentwise positive

trajectory(S, x) : [0,∞) → X for (Σ1) and the dilution rate

D(t) =sin(t)

2 + cos(t)+

m(2− cos(t))4a + 2− cos(t)

(D)

andµ as in (G) withm > 4a + 1, the corresponding deviation

(S(t), x(t)) := (S(t)− Sr(t), x(t)− xr(t)) (E)

of (S, x) from the reference trajectory

(Sr(t), xr(t)) :=(

12− 1

4cos(t),

12

+14

cos(t))

(R)

for (Σ1) asymptotically approaches(0, 0) ast → +∞.

MAIN TRACKING RESULT for Σ1

Statement of Main Tracking Result: Given any componentwise positivetrajectory(S, x) : [0,∞) → X for (Σ1) and the dilution rate

D(t) =sin(t)

2 + cos(t)+

m(2− cos(t))4a + 2− cos(t)

(D)

andµ as in (G) withm > 4a + 1, the corresponding deviation

(S(t), x(t)) := (S(t)− Sr(t), x(t)− xr(t)) (E)

of (S, x) from the reference trajectory

(Sr(t), xr(t)) :=(

12− 1

4cos(t),

12

+14

cos(t))

(R)

for (Σ1) asymptotically approaches(0, 0) ast → +∞.

(Similar results hold if we instead pick anyxr(t) s.t.∃` > 0 s.t.∀t ≥ 0,max{`, |xr(t)|} ≤ xr(t) ≤ 3

4 andSr = 1− xr, for suitableD.)

OUTLINE of PROOF of MAIN TRACKING RESULT for Σ1

First transform the error dynamics for (E) into

˙z = −D(t)z,

˙ξ = µ(z − eξ)− µ(1− eξr(t)),

(TE)

wherez := z − 1, z = S + x, ξ := ξ − ξr, ξ := ln(x), andξr := ln(xr).

OUTLINE of PROOF of MAIN TRACKING RESULT for Σ1

First transform the error dynamics for (E) into

˙z = −D(t)z,

˙ξ = µ(z − eξ)− µ(1− eξr(t)),

(TE)

wherez := z − 1, z = S + x, ξ := ξ − ξr, ξ := ln(x), andξr := ln(xr).Next show that (TE) admits the Lyapunov-like function

L3(z, ξ) := eξ − 1− ξ +4m

aDz2 (L)

whereD(t) ≥ D > 0 ∀t. Along the trajectories of (TE), we get

L3 ≤ − ma(eξ − 1)2

16(a + 2 + z2)(a + 1)− 4m

az2 . (DK)

Using a Barbalat’s Lemma argument,(z, ξ) → 0 exponentially.

ROBUSTNESS with respect ton ADDITIONAL SPECIES

S = D(t)(1− S)− µ(S)x−n∑

i=1

νi(S)yi ,

x = x(µ(S)−D(t)), yi = yi(νi(S)−D(t))

(AS)

D is from (D),yi = concentration of theith additional species, eachνi is

continuous and increasing and satisfiesνi(0) = 0 andνi(1) < D.

ROBUSTNESS with respect ton ADDITIONAL SPECIES

S = D(t)(1− S)− µ(S)x−n∑

i=1

νi(S)yi ,

x = x(µ(S)−D(t)), yi = yi(νi(S)−D(t))

(AS)

D is from (D),yi = concentration of theith additional species, eachνi is

continuous and increasing and satisfiesνi(0) = 0 andνi(1) < D.

Multi-Species Result: The error between any componentwise

positive solution(S, x, y1, y2, . . . , yn) of (AS) and

(Sr, xr, 0, . . . , 0) =(

12− 1

4cos(t),

12

+14

cos(t), 0, . . . , 0)

converges exponentially to the zero vector ast → +∞.

ROBUSTNESS with respect ton ADDITIONAL SPECIES

S = D(t)(1− S)− µ(S)x−n∑

i=1

νi(S)yi ,

x = x(µ(S)−D(t)), yi = yi(νi(S)−D(t))

(AS)

D is from (D),yi = concentration of theith additional species, eachνi iscontinuous and increasing and satisfiesνi(0) = 0 andνi(1) < D.

Multi-Species Result: The error between any componentwisepositive solution(S, x, y1, y2, . . . , yn) of (AS) and

(Sr, xr, 0, . . . , 0) =(

12− 1

4cos(t),

12

+14

cos(t), 0, . . . , 0)

converges exponentially to the zero vector ast → +∞.

Significance:The stability of the reference trajectory (R) is robust withrespect to additional species that are exponentially decaying to extinction.

OUTLINE of PROOF of MULTI-SPECIES RESULT

Sinceνi(1) < D for eachi, the form of the dynamics forS along our

componentwise positive trajectories implies that there existε > 0 and

T ≥ 0 such that(i) S(t) ≤ 1 + ε for all t ≥ T and(ii) νi(1 + ε) < D for

all i = 1, 2, . . . , n. We next choose

δ := D − maxi=1,...,n

νi(1 + ε) > 0.

OUTLINE of PROOF of MULTI-SPECIES RESULT

Sinceνi(1) < D for eachi, the form of the dynamics forS along ourcomponentwise positive trajectories implies that there existε > 0 andT ≥ 0 such that(i) S(t) ≤ 1 + ε for all t ≥ T and(ii) νi(1 + ε) < D forall i = 1, 2, . . . , n. We next choose

δ := D − maxi=1,...,n

νi(1 + ε) > 0.

The result now follows using the Lyapunov-like function

L4(z, ξ, y1, ..., yn) = L3(z, ξ) + An∑

i=1

y2i , where A :=

16mn2

aδ.

in conjunction with Barbalat’s Lemma. Along the relevant trajectories,

L4 ≤ − ma(eξ − 1)2

16(a + 1)(a + 2 + z2)− 3m

az2 − 16mn2

a

n∑

i=1

y2i .

ROBUSTNESS with respect to ACTUATOR ERRORS

{S(t) = [D(t) + u1(t)](1 + u2(t)− S(t))− µ(S(t))x(t) ,

x(t) = x(t)[µ(S(t))−D(t)− u1(t)] .(Σp)

ROBUSTNESS with respect to ACTUATOR ERRORS

{S(t) = [D(t) + u1(t)](1 + u2(t)− S(t))− µ(S(t))x(t) ,

x(t) = x(t)[µ(S(t))−D(t)− u1(t)] .(Σp)

If |u| stays below a computable prescribed bound, then there are functions

β ∈ KL andγ ∈ K∞ such that the transformed error vector

y(t; to, yo, α) :=(S(t; t0, (S, x)(0), α)− Sr(t), ln(x(t; t0, (S, x)(0), α))− ln(xr(t)))

for all disturbancesu = (u1, u2) = α and initial conditions satisfies

|y(t; to, yo, α)| ≤ β(|yo|, t− to) + γ(|α|∞) . (ISS)

ROBUSTNESS with respect to ACTUATOR ERRORS

{S(t) = [D(t) + u1(t)](1 + u2(t)− S(t))− µ(S(t))x(t) ,

x(t) = x(t)[µ(S(t))−D(t)− u1(t)] .(Σp)

If |u| stays below a computable prescribed bound, then there are functionsβ ∈ KL andγ ∈ K∞ such that the transformed error vector

y(t; to, yo, α) :=(S(t; t0, (S, x)(0), α)− Sr(t), ln(x(t; t0, (S, x)(0), α))− ln(xr(t)))

for all disturbancesu = (u1, u2) = α and initial conditions satisfies

|y(t; to, yo, α)| ≤ β(|yo|, t− to) + γ(|α|∞) . (ISS)

Under the less stringent condition|u| < 12 min{1, D}, there are functions

δi ∈ K∞ andβ ∈ KL so that the trajectories everywhere satisfy

δ1(|y(t; to, yo, α)|) ≤ β(|yo|, t− to) +∫ t+to

to

δ2(|α(r)|)dr . (iISS)

SIMULATIONS

We simulated (Σp) with m = 10, a = 12 , u1(t) = 0.5e−t, u2(t) ≡ 0,

to = 0, x(0) = 2, andS(0) = 1. Our theory implies that the convergence

of (S(t), x(t)) to (Sr(t), xr(t)) satisfies iISS for disturbancesu that are

valued in[−u, u]2 for any positive constantu < min{1, D} = 1.

SIMULATIONS

We simulated (Σp) with m = 10, a = 12 , u1(t) = 0.5e−t, u2(t) ≡ 0,

to = 0, x(0) = 2, andS(0) = 1. Our theory implies that the convergenceof (S(t), x(t)) to (Sr(t), xr(t)) satisfies iISS for disturbancesu that arevalued in[−u, u]2 for any positive constantu < min{1, D} = 1.

0 2 4 6 8 100.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0.9

1

Time

Tra

ject

orie

s

(a) S(t) TrackingSr(t)

0 2 4 6 8 100

0.5

1

1.5

2

2.5

Time

Tra

ject

orie

s

(b) x(t) Trackingxr(t)

CONCLUSIONS

• Chemostats provide an important framework for modelingspecies

competingfor nutrients. They provide the foundation for much

current research inbioengineering, ecology, andpopulation biology.

CONCLUSIONS

• Chemostats provide an important framework for modelingspecies

competingfor nutrients. They provide the foundation for much

current research inbioengineering, ecology, andpopulation biology.

• For the case of one species competing for one nutrient and a suitable

time-varying dilution rate, we proved the stability of an appropriate

reference trajectoryusingLyapunov function methods.

CONCLUSIONS

• Chemostats provide an important framework for modelingspecies

competingfor nutrients. They provide the foundation for much

current research inbioengineering, ecology, andpopulation biology.

• For the case of one species competing for one nutrient and a suitable

time-varying dilution rate, we proved the stability of an appropriate

reference trajectoryusingLyapunov function methods.

• The stability is maintained when there are additional species that are

being driven to extinction, ordisturbances of small magnitudeon the

dilution rate and input nutrient concentration.

CONCLUSIONS

• Chemostats provide an important framework for modelingspecies

competingfor nutrients. They provide the foundation for much

current research inbioengineering, ecology, andpopulation biology.

• For the case of one species competing for one nutrient and a suitable

time-varying dilution rate, we proved the stability of an appropriate

reference trajectoryusingLyapunov function methods.

• The stability is maintained when there are additional species that are

being driven to extinction, ordisturbances of small magnitudeon the

dilution rate and input nutrient concentration.

• Extensions to chemostats withmultiple competing species, time

delays, limited informationabout the current state, andmeasurement

uncertaintywould be desirable and are being studied.

ACKNOWLEDGEMENTS

• Malisoff was supported byNSF/DMS Grant 0424011. De Leenheer

was supported byNSF/DMS Grant 0500861. The authors thankJeff

SheldonandHairui Tu for assisting with the graphics.

ACKNOWLEDGEMENTS

• Malisoff was supported byNSF/DMS Grant 0424011. De Leenheer

was supported byNSF/DMS Grant 0500861. The authors thankJeff

SheldonandHairui Tu for assisting with the graphics.

• A journal version will appear inMathematical Biosciences and

Engineering. The authors thankYang Kuangfor the opportunity to

publish their work in his esteemed journal.

ACKNOWLEDGEMENTS

• Malisoff was supported byNSF/DMS Grant 0424011. De Leenheer

was supported byNSF/DMS Grant 0500861. The authors thankJeff

SheldonandHairui Tu for assisting with the graphics.

• A journal version will appear inMathematical Biosciences and

Engineering. The authors thankYang Kuangfor the opportunity to

publish their work in his esteemed journal.

• Part of this work was done while Mazenc and De Leenheer visited

theLouisiana State University (LSU) Department of Mathematics.

They thank LSU for the kind hospitality they enjoyed.

ACKNOWLEDGEMENTS

• Malisoff was supported byNSF/DMS Grant 0424011. De Leenheer

was supported byNSF/DMS Grant 0500861. The authors thankJeff

SheldonandHairui Tu for assisting with the graphics.

• A journal version will appear inMathematical Biosciences and

Engineering. The authors thankYang Kuangfor the opportunity to

publish their work in his esteemed journal.

• Part of this work was done while Mazenc and De Leenheer visited

theLouisiana State University (LSU) Department of Mathematics.

They thank LSU for the kind hospitality they enjoyed.

• The authors thank the referees,Madalena Chaves, andEduardo

Sontagfor illuminating comments and discussions at the 45th IEEE

Conference on Decision and Control in San Diego, CA.