Plant Breeding and Genetics

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  • 7/30/2019 Plant Breeding and Genetics

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    Plant Breeding and Applied GeneticsUte Achenbach

    Summer, 2008

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    Course Objectives

    Comprehend and be able to discuss howbreeders meet their breeding goals today asopposed to several decades ago. This requires

    basic knowledge on classical breedingmethods and an understanding on molecularbreeding.

    Examples will be provided to emphasize theimportance of genetics in modern breedingpractices.

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    Learning outcomes

    understand the developments in plant breeding and thestate of the art breeding practices (ornamentals vs. crops)

    have some knowledge on the basics of genetics (Mendel,QTL etc.) and understand the idea and the potential ofgenetic engineering

    have some understanding on the concepts of molecularbreeding

    have some (practical) knowledge to apply molecular markersfor the identification of traits in the genome

    be able to determine whether information from the internetregarding modern breeding methods are relevant andinformative

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    Date Program

    May 13 Introduction (History of Plant Breeding)

    May 20 Aspects of Plant Breeding (Breeding goals and recentachievements)

    May 27 Tour to Engelmanns Nursery

    Jun 3

    Basic genetics(Mendels, QTL, Epistasis)

    Jun 11

    Classical Plant Breeding (Breeding schemes, e.g. Peach)

    Jun 17 Applied Plant Breeding

    July 1

    Molecular Genetics (Tissue culture, e.g. grapes)(Dr. Sadanand Dhekney)

    July 8

    Molecular Genetics (PCR, Different marker systems)(Dr. Sadanand Dhekney)

    July 15 LAB SESSION (PCR)

    July 22 DNA fingerprinting and Genetic Engineering (crops andornamentals)

    July 29 Molecular Breeding/ Breeding by design

    Aug 5

    Exam

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    History and development of plantbreeding

    (a journey through time)

    13th May 2008

    http://images.google.com/imgres?imgurl=http://www.comp-archaeology.org/DomesticatedCerealGrainCAWEB.gif&imgrefurl=http://www.comp-archaeology.org/Bandkeramik.htm&h=303&w=521&sz=175&hl=en&start=5&tbnid=vYmNPLV7ipkOVM:&tbnh=76&tbnw=131&prev=/images%3Fq%3Ddomestication%26gbv%3D2%26hl%3Den
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    9000 BC First evidence of plant domestication in the hills above theTigris river

    1694 Camerarius first to demonstrate sex in (monoecious) plants and suggestedcrossing as a method to obtain new plant types

    1714 Mather observed natural crossing in maize

    1761-1766 Kohlreuter demonstrated that hybrid offspringreceived traits from both parents and were intermediate inmost traits, first scientific hybrid in tobacco

    1866 Mendel: Experiments in plant hybridization

    1900 Mendels laws of heredity rediscovered

    1944 Avery, MacLeod, McCarty discovered DNA is hereditarymaterial

    1953 Watson, Crick, Wilkins proposed a model for DNAstructure

    1970 Borlaug received Nobel Prize for the Green Revolution

    Berg, Cohen, and Boyer introduced the recombinant DNAtechnology

    1994 FlavrSavr tomato developed as first GMO

    1995 Bt-corn developed

    Selected milestones in plant breeding

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    National Human Genome Research

    Institute by Darryl Leja

    DNA: nucleic acid that

    contains all the

    genetic instructions

    used in the

    development andfunctioning of all

    known living

    organisms

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    Domestication: The process by which peopletry to control the reproductive rates ofanimals and plants. Without knowledge on thetransmission of traits from parents to theiroffspring.

    Plant Breeding: The application of geneticanalysis to development of plant lines bettersuited for human purposes.

    Plant Breeding and Selection Methods to meet thefood, feed, fuel, and fiber needs of the world

    Genetic Engineering to increase the effectivenessand efficiency of plant breeding.

    Prunus

    persicaSource: Wikipedia

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    Example: Peach (Prunus persica)

    Originates from China Introduced to Persia and the Mediterranean

    region along the silk route

    Trade and cultural interaction

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    Breeding objectives

    Food (yield and nutritional value), feed,fibre, pharmaceuticals (plantibodies),

    landscape, industrial need (eg. Crops arebeing produced in regions to which they arenot native).

    http://images.google.com/imgres?imgurl=http://img2.tradeget.com/prbusiness/LXTE1LW31corn_gluten.jpg&imgrefurl=http://www.tradeget.com/free_list/p53118/O19962/animal_feed_additive.html&h=360&w=360&sz=32&hl=en&start=18&um=1&tbnid=cMbme7woN5gcDM:&tbnh=121&tbnw=121&prev=/images%3Fq%3Danimal%2Bfeed%26um%3D1%26hl%3Denhttp://images.google.com/imgres?imgurl=http://www.blackfalconorganic.org/organic-cotton.jpg&imgrefurl=http://www.blackfalconorganic.org/ethics.php&h=600&w=600&sz=58&hl=en&start=6&um=1&tbnid=0u8adrWp9MiI-M:&tbnh=135&tbnw=135&prev=/images%3Fq%3Dfibre%2Bcotton%26um%3D1%26hl%3Denhttp://images.google.com/imgres?imgurl=http://w2.byuh.edu/services/food/images/food_main.jpg&imgrefurl=http://w2.byuh.edu/services/food/&h=300&w=400&sz=63&hl=en&start=25&um=1&tbnid=GSJ04Yz7tY1VtM:&tbnh=93&tbnw=124&prev=/images%3Fq%3Dfood%26start%3D18%26ndsp%3D18%26um%3D1%26hl%3Den%26sa%3DN
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    Note: Details among plant species varybecause of origin, mode ofreproduction, ploidy levels, and traits

    of greater importance andadjustments were made to adapt tospecific situations.

    http://images.google.com/imgres?imgurl=http://www2.warwick.ac.uk/fac/sci/whri/research/plantmineralnutrition/widerowcrop/cara_flowerweb.jpg&imgrefurl=http://www2.warwick.ac.uk/fac/sci/whri/research/plantmineralnutrition/widerowcrop/&h=375&w=500&sz=28&hl=en&start=14&um=1&tbnid=DCZIroZiDTfO3M:&tbnh=98&tbnw=130&prev=/images%3Fq%3Dpotato%2Bflower%26um%3D1%26hl%3Denhttp://images.google.com/imgres?imgurl=http://www.dacres.org/images/flowers/potatoflower.jpg&imgrefurl=http://www.dacres.org/Photo%2520Gallery.htm&h=683&w=1024&sz=85&hl=en&start=2&um=1&tbnid=gR9twbUrhzjfzM:&tbnh=100&tbnw=150&prev=/images%3Fq%3Dpotato%2Bflower%26um%3D1%26hl%3Denhttp://www.slh.wisc.edu/cytogenetics/cases/gifs/com_karyotypes/Triploid96651.jpg
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    Conducting plant breeding

    Traditional/classical breeding: crossingtwo plants (hybridization)

    genetically manipulating?? Variability/ Selection

    Recombinant DNA technology

    http://images.google.com/imgres?imgurl=http://www.nrc-cnrc.gc.ca/images/photos/200603oil.jpg&imgrefurl=http://www.nrc-cnrc.gc.ca/highlights/2006/0603oil_e.html&h=172&w=250&sz=36&hl=en&start=9&tbnid=8fa6zsE0tkE9TM:&tbnh=76&tbnw=111&prev=/images%3Fq%3Dplant%2Bbreeding%26gbv%3D2%26hl%3Denhttp://images.google.com/imgres?imgurl=http://www.hrt.msu.edu/PBSymp/picture2.jpg&imgrefurl=http://www.hrt.msu.edu/PBSymp/&h=347&w=450&sz=225&hl=en&start=3&tbnid=SEvXItXKir3BHM:&tbnh=98&tbnw=127&prev=/images%3Fq%3Dplant%2Bbreeding%26gbv%3D2%26hl%3Den
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    Scientific disciplines andtechnologies of plant breeding

    Genetics

    Botany

    Plant physiology Agronomy

    Pathology and entomology

    Statistics Biochemistry

    http://images.google.com/imgres?imgurl=http://www.upasitearesearch.org/images/entomolgy3.jpg&imgrefurl=http://www.upasitearesearch.org/entomology1.html&h=145&w=197&sz=7&hl=en&start=3&tbnid=j8U29IDBMhYK5M:&tbnh=77&tbnw=104&prev=/images%3Fq%3Dentomolgy%26gbv%3D2%26hl%3Denhttp://imagecache2.allposters.com/images/pic/JAG/03-PS111-3~Botany-Posters.jpghttp://images.google.com/imgres?imgurl=http://ocw.tufts.edu/data/graphics/genetics.jpg&imgrefurl=http://ocw.tufts.edu/Course/20&h=315&w=419&sz=36&hl=en&start=2&tbnid=ue2CQ4yV3WNrWM:&tbnh=94&tbnw=125&prev=/images%3Fq%3Dgenetics%26gbv%3D2%26hl%3Den
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    Classic/ traditional tools

    Emasculation

    Hybidization

    Wide crossing

    Selection

    Chromosome counting

    Chromosome doubling

    Male sterility

    Triploidy

    Linkage analysis

    Statistical tools

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    Advanced tools

    Mutagenesis

    Tissue culture

    Haploidy

    In situ hybridization

    DNA markers

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    Advanced technology

    Molecular markers

    Marker-assisted selection

    DNA sequencing

    Plant genomic analysis

    Bioinformatics

    Microarray analysis

    Primer design

    Plant transformation

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    Basic steps

    Objective

    Germplasm

    Selection

    Evaluation

    http://images.google.com/imgres?imgurl=http://learningandteaching.dal.ca/taguide/Image57.gif&imgrefurl=http://learningandteaching.dal.ca/taguide/SummativeEval.html&h=364&w=393&sz=7&hl=en&start=3&um=1&tbnid=JjR9Eb5EZwODYM:&tbnh=115&tbnw=124&prev=/images%3Fq%3Devaluation%26um%3D1%26hl%3Denhttp://images.google.com/imgres?imgurl=http://www.edgewater.com/NR/rdonlyres/CA50F155-E411-4D72-BD12-8B2DF8DFB285/0/2006_SystemSelection_Dec.jpg&imgrefurl=http://www.gamespot.com/pages/unions/forums/show_msgs.php%3Ftopic_id%3D26277470%26union_id%3D14074&h=2550&w=1769&sz=2370&hl=en&start=3&um=1&tbnid=pWzCtdegYyfSXM:&tbnh=150&tbnw=104&prev=/images%3Fq%3Dselection%26um%3D1%26hl%3Denhttp://www.ars-grin.gov/npgs/cgc_reports/alfalfa/fig6.jpg