1
Outlook JOURNAL CLUB TIG January 1999, volume 15, No. 1 0168-9525/99/$ – see front matter © 1999 Elsevier Science All rights reserved. 14 These two papers address the regulation of Hox gene expression in the mouse embryo. Previous work has shown that Fgfr1 null mutations disrupt gastru- lation, probably via an effect on cell movement. Partenen et al. 1 have created a series of Fgfr1 alleles leading to less severe phenotypes, which allow them to dissect a potential role for FGF in pat- terning the anteroposterior (A–P) axis. Hypomorphic mutations, which reduce the level of Fgfr1 transcription, produce posterior truncation of the embryo and homeotic transformations of the verte- brae similar to those seen in certain Hox gene knockouts. This led them to analyse the effect on Hox expression, and they show that the mesoderm expression of Hoxd4, Hoxb4 and Hoxb9 is altered in a manner consistent with the observed vertebral transfor- mations. Hoxd13 expression is also reduced in the limb buds, consistent with defects in distal limb structures. FGF signalling is believed to be trans- duced through RAS–MAP kinase and PLCg pathways. Tyrosine 766 of FGFR1 is an autophosphorylation site that is implicated in transduction via PLCg. Mutation of Y766 produced ver- tebral transformations in the opposite direction to those caused by hypomor- phic mutations, suggesting that this site is normally involved in repression of ligand-dependent FGFR1 function. It is possible that these FGFR1 mutations affect Hox gene expression by altering cell migration or proliferation. Such alterations are not, however, observed in all mutant alleles, suggesting a more direct involvement of FGF in A–P pat- terning. One possibility is that FGF alters the expression of Cdx genes, ver- tebrate homologues of Drosophila cau- dal. Charité et al. 2 have identified CDX- binding sites within an upstream regulatory element that can drive regionally restricted expression from the Hoxb8 promoter. A subfragment containing four CDX-binding sites can partially reproduce this expression pat- tern, and mutation of the sites abolishes its effect. They show that factors in E8.5 embryos that bind these sites are present in an A–P gradient, consistent with the expression pattern of Cdx1, -2 and -4. Supershift data also suggest that these factors are CDX proteins. Ectopic expression of Cdx4 alters the expres- sion pattern of reporters driven by the CDX-binding element, and of endogen- ous Hoxb8. These results suggest that, unlike Drosophila caudal, vertebrate CDX factors are directly involved in establishing the early expression of Hox genes. Although Partenen et al. 1 could not detect significant changes in the expression of Cdx1 and -4 in embryos carrying a hypomorphic FGFR1 mu- tation, they did not rule out their involvement in FGF-mediated regulation of Hox gene expression, as the dynamic pattern of Cdx expression makes it hard to determine whether they are affected. Regulating Hox genes 1 Partenen, J. et al. 1998) Opposite phenotypes of hypomorphic and Y766 phosphorylation site mutations reveal a function for Fgfr1 in anteroposterior patterning of mouse embryos. Genes Dev. 12, 2322–2344 2 Charité, J. et al. (1998) Transducing positional information to the Hox genes: critical interaction of cdx gene products with position- sensitive regulatory elements. DeveIopment 125, 4349–4358 Alison Snape [email protected] The prion hypothesis proposes that the agent responsible for the neurodegener- ative diseases of scrapie, CJD and BSE is a disease-causing isoform of the prion protein termed PrP Sc . The experimental evidence that the prion protein and PrP gene is central to all aspects of the dis- ease is substantial with the exception of the phenomenon of strains. Studies on the passage of scrapie isolates in geneti- cally inbred mice have demonstrated reproducible variation in the incubation period and pathology. This requires that the prion agent carry a heritable informational molecule (conventionally nucleic acid). If the prion hypothesis is correct, it must explain strains. Recently, limited evidence has begun to emerge that the phenotypic variation observed in scrapie strains may be due to multiple conformations of PrP Sc . This paper demonstrates that eight different prion strain passages in hamsters can be distinguished by the use of a confor- mation-dependent immunoassay. The assay relies on the observation that the binding of antibodies to PrP Sc is weak unless the molecule is denatured. The ratio of antibody binding to native and denatured brain extracts from hamsters infected with different strains combined with the concentration of prion protein present gives a unique profile for each strain. Using this assay, Safar et al. 1 have also correlated the incubation time of various strains with the relative amounts of protease-sensitive PrP Sc and suggest that the rate of clearance of PrP Sc rather than the rate of its synthesis within a cell determines the ultimate incubation period of the disease. Whether the variation in conformation of PrP Sc and differences in the clearance rates of PrP Sc can also explain the neuropathological variations associated with strains remains to be seen. Prions – what a strain... 1 Safar, J. et al. (1998) Eight prion strains have PrP Sc molecules with different conformations. Nat. Med. 4, 1157–1165 Mark Rogers [email protected] NEW – TIG Genetic Nomenclature Guide If you require a copy of The TIG Genetic Nomenclature Guide please contact: Thelma Reid ([email protected]), Elsevier Trends Journals, 68 Hills Road, Cambridge, UK CB2 1LA. Tel: +44 1223 311114, Fax: +44 1223 321410

Prions – what a strain

Embed Size (px)

Citation preview

Page 1: Prions – what a strain

Outlook JOURNAL CLUB

TIG January 1999, volume 15, No. 1 0168-9525/99/$ – see front matter © 1999 Elsevier Science All rights reserved. 14

These two papers address the regulationof Hox gene expression in the mouseembryo. Previous work has shown thatFgfr1 null mutations disrupt gastru-lation, probably via an effect on cellmovement. Partenen et al.1 have createda series of Fgfr1 alleles leading to lesssevere phenotypes, which allow them todissect a potential role for FGF in pat-terning the anteroposterior (A–P) axis.Hypomorphic mutations, which reducethe level of Fgfr1 transcription, produceposterior truncation of the embryo andhomeotic transformations of the verte-brae similar to those seen in certain Hoxgene knockouts. This led them toanalyse the effect on Hox expression,and they show that the mesodermexpression of Hoxd4, Hoxb4 andHoxb9 is altered in a manner consistentwith the observed vertebral transfor-mations. Hoxd13 expression is alsoreduced in the limb buds, consistentwith defects in distal limb structures.FGF signalling is believed to be trans-duced through RAS–MAP kinase andPLCg pathways. Tyrosine 766 ofFGFR1 is an autophosphorylation site

that is implicated in transduction viaPLCg. Mutation of Y766 produced ver-tebral transformations in the oppositedirection to those caused by hypomor-phic mutations, suggesting that this siteis normally involved in repression of ligand-dependent FGFR1 function. It ispossible that these FGFR1 mutationsaffect Hox gene expression by alteringcell migration or proliferation. Suchalterations are not, however, observedin all mutant alleles, suggesting a moredirect involvement of FGF in A–P pat-terning. One possibility is that FGFalters the expression of Cdx genes, ver-tebrate homologues of Drosophila cau-dal. Charité et al.2 have identified CDX-binding sites within an upstreamregulatory element that can driveregionally restricted expression fromthe Hoxb8 promoter. A subfragmentcontaining four CDX-binding sites canpartially reproduce this expression pat-tern, and mutation of the sites abolishesits effect. They show that factors in E8.5embryos that bind these sites are presentin an A–P gradient, consistent with theexpression pattern of Cdx1, -2 and -4.

Supershift data also suggest that thesefactors are CDX proteins. Ectopicexpression of Cdx4 alters the expres-sion pattern of reporters driven by theCDX-binding element, and of endogen-ous Hoxb8. These results suggest that,unlike Drosophila caudal, vertebrateCDX factors are directly involved inestablishing the early expression of Hoxgenes. Although Partenen et al.1 couldnot detect significant changes in theexpression of Cdx1 and -4 in embryoscarrying a hypomorphic FGFR1 mu-tation, they did not rule out theirinvolvement in FGF-mediated regulationof Hox gene expression, as the dynamicpattern of Cdx expression makes it hardto determine whether they are affected.

Regulating Hox genes

1 Partenen, J. et al. 1998) Opposite phenotypesof hypomorphic and Y766 phosphorylation sitemutations reveal a function for Fgfr1 inanteroposterior patterning of mouse embryos.Genes Dev. 12, 2322–2344

2 Charité, J. et al. (1998) Transducing positionalinformation to the Hox genes: criticalinteraction of cdx gene products with position-sensitive regulatory elements. DeveIopment125, 4349–4358

Alison Snape

[email protected]

The prion hypothesis proposes that theagent responsible for the neurodegener-ative diseases of scrapie, CJD and BSE isa disease-causing isoform of the prionprotein termed PrPSc. The experimentalevidence that the prion protein and PrPgene is central to all aspects of the dis-ease is substantial with the exception ofthe phenomenon of strains. Studies onthe passage of scrapie isolates in geneti-cally inbred mice have demonstratedreproducible variation in the incubationperiod and pathology. This requiresthat the prion agent carry a heritableinformational molecule (conventionallynucleic acid). If the prion hypothesis is

correct, it must explain strains.Recently, limited evidence has begun toemerge that the phenotypic variationobserved in scrapie strains may be dueto multiple conformations of PrPSc. Thispaper demonstrates that eight differentprion strain passages in hamsters can bedistinguished by the use of a confor-mation-dependent immunoassay. Theassay relies on the observation that thebinding of antibodies to PrPSc is weakunless the molecule is denatured. Theratio of antibody binding to native anddenatured brain extracts from hamstersinfected with different strains combinedwith the concentration of prion protein

present gives a unique profile for eachstrain. Using this assay, Safar et al.1

have also correlated the incubation timeof various strains with the relativeamounts of protease-sensitive PrPSc andsuggest that the rate of clearance ofPrPSc rather than the rate of its synthesiswithin a cell determines the ultimateincubation period of the disease.Whether the variation in conformationof PrPSc and differences in the clearancerates of PrPSc can also explain the neuropathological variations associatedwith strains remains to be seen.

Prions – what a strain...

1 Safar, J. et al. (1998) Eight prion strains havePrPSc molecules with different conformations.Nat. Med. 4, 1157–1165

Mark Rogers

[email protected]

NEW – TIG Genetic Nomenclature GuideIf you require a copy of

The TIG Genetic Nomenclature Guide

please contact:

Thelma Reid ([email protected]), Elsevier Trends Journals, 68 Hills Road, Cambridge, UK CB2 1LA. Tel: +44 1223 311114, Fax: +44 1223 321410