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PROFESSOR R. I. JONES - PUBLICATIONS

Articles in refereed journals

154 Agasild, H., Panksep, K., Tonno, I., Blank, K., Koiv, T., Freiberg, R., Laugaste, R., Jones,

R.I., Noges, P. & Noges, T. (2019). Role of potentially toxic cyanobacteria in crustacean

zooplankton diet in a eutrophic lake. Harmful Algae 89: DOI: 10.1016/j.hal.2019.101688

153 Kankaala, P., Arvola, L., Hiltunen, M., Huotari, J., Jones, R.I., Nykänen, H., Ojala, A.,

Olin, M., Peltomaa, E., Peura, S., Tulonen, T. & Vesala, S. (2019). Ecosystem responses to

increased organic carbon concentration: comparing results based on long-term monitoring

and whole-lake experimentation. Inland Waters 9: 489-502.

152 Ozdilek, S.Y., Partal, N. & Jones, R.I. (2019). An invasive species, Carassius gibelio, alters

the native fish community through trophic niche competition. Aquatic Sciences 81: DOI:

10.1007/s00027-019-0623-6

151 Ruokonen, T.J., Kiljunen, M., Erkinaro, J., Orell, P., Sivonen, O., Vestola, E. & Jones, R.I.

(2019). Migration strategies of brown trout (Salmo trutta) in a subarctic river system as

revealed by stable isotope analysis. Ecology of Freshwater Fish 28: 53-61.

150 Agasild, H., Kisand, A., Ainelo, E., Feldmann, T., Timm, H., Karus, K., Kisand, V., Jones,

R.I. & Noges, T. (2018). Chironomid incorporation of methane-derived carbon in plankton-

and macrophyte-dominated habitats in a large shallow lake. Freshwater Biology 63: 1433-

1445.

149 Jones, R.I., Kankaala, P., Nykänen, H., Peura, S., Rask, M. & Vesala, S. (2018). Whole-

lake sugar addition demonstrates trophic transfer of dissolved organic carbon to top

consumers. Ecosystems 21:495-506.

148 Eloranta, A.P., Vejříková, I., Čech, M., Vejřík, L., Holubová, M., Šmejkal, M., Frouzová,

J., Kiljunen, M., Jones, R.I. & Peterka, J. (2017). Some like it deep: Intraspecific niche

segregation in ruffe (Gymnocephalus cernua). Freshwater Biology 62:1401 – 1409.

147 Torniainen, J., Lensu, A., Vuorinen, P.J., Sonninen, E., Keinänen,M., Jones, R.I.,

Patterson, W.P., & Kiljunen, M. (2017). Oxygen and carbon isoscapes for the Baltic Sea:

Testing their applicability in fish migration studies Ecol. Evol. DOI: 10.1002/ece3.2841.

146 Torniainen, J., Kainz, M.J., Jones, R.I., Keinänen, M., VuorinenP.J & Kiljunen,M. (2017).

Influence of the marine feeding area on the muscle and egg fatty-acid composition of

Atlantic salmon Salmo salar spawners estimated from the scale stable isotopes. J. Fish

Biology 90: 1717-1733.

145 Vesterinen, J., Devlin, S., Syväranta, J., & Jones, R.I. (2017). Influence of littoral

periphyton on whole-lake metabolism relates to littoral vegetation in humic lakes. Ecology,

98: 3074-3085.

144 Vesterinen, J., Devlin, S., Syväranta, J., & Jones, R.I. (2017). Epiphytic bacteria make an

important contribution to heterotrophic bacterial production in a humic boreal lake. Aquatic

Microbial Ecology, 79: 247-257.

143 Vesterinen, J., Syväranta, J., Devlin, S.P. & Jones, R.I. (2016). Periphyton support for

littoral secondary production in a highly humic boreal lake. Freshwater Science 35: 1235-

1247.

142 Rinta, P., van Hardenbroek, M., Jones, R.I., Kankaala, P., Rey, F., Szidal, S., Wooller,.

M.J. & Heiri, O. (2016). Land use affects carbon sources to the pelagic food web in a small

boreal lake. PLoS ONE 11(8): e0159900. doi:10.1371/journal.pone.0159900.

141 Saarenheimo, J., Aalto, S.L., Syväranta, J., Devlin, S.P., Tiirola, M. & Jones, R.I. (2016).

Bacterial community response to changes in a tri-trophic cascade during a whole-lake fish

manipulation. Ecology 97: 684-693.

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140 Vesterinen, J., Devlin, S.P., Syväranta, J. & Jones, R.I. (2016). Accounting for littoral

primary production by periphyton shifts a highly humic boreal lake towards net autotrophy.

Freshwater Biology 61: 265-276.

139 Dorado-Garcıa, I., Syväranta, J., Devlin, S.P., Medina-Sanchez, J.M. & Jones, R.I. (2016).

Experimental assessment of a possible microbial priming effect in a humic boreal lake.

Aquat. Sci. 78: 191-202.

138 Devlin, S.P., Saarenheimo, J., Syväranta, J. & Jones, R.I. (2015). Top consumer abundance

influences lake methane efflux. Nature Communications doi: 10.1038/ncomms9787.

137 Taipale, S.J., Peltomaa, E., Hiltunen, M., Jones, R.I., Hahn, M.W., Biasi, C. & Brett, M.T.

(2015). Inferring phytoplankton, terrestrial plant and bacteria bulk d13C values from

compound specific analyses of lipids and fatty acids. PLoS ONE 10(7): e0133974.

doi:10.1371/journal.pone.0133974.

136 Ercoli, F., Ruokonen, T.J., Koistinen, S., Jones, R.I. & Hämäläinen, H. (2015). The

introduced signal crayfish and native noble crayfish have different effects on sublittoral

macroinvertebrate assemblages in boreal lakes. Freshwater Biology 60: 1688-1698.

135 Ercoli, F., Ruokonen, T.J., Erkamo, E., Jones, R.I. & Hämäläinen, H. (2015). Comparing

the effects of introduced signal crayfish and native noble crayfish on the littoral invertebrate

assemblages of boreal lakes. Freshwater Science 34: 555-563.

134 Eloranta, A.P., Kahilainen, K.K., Amundsen, P.-A., Knudsen, R., Harrod, C. & Jones, R.I.

(2015). Lake size and fish diversity determine resource use and trophic position of a top

predator in high-latitude lakes. Ecol. Evolut. 5: 1664-1675.

133 Peura, S., Bertilsson, S., Jones, R.I. & Eiler, A. (2015). Resistant microbial co-occurrence

patterns inferred by network topology. Appl. Env. Microbiol. 81: 2090-2097.

132 Özdilek, S. & Jones, R.I. (2014). The diet composition and trophic position of introduced

Prussian Carp Carassius gibelio (Bloch, 1782) and native fish species in a Turkish river-

Turkish J. Fish. Aquat. Sci. 14: 769-776.

131 Ercoli, F., Ruokonen, T.J., Hämäläinen, H. & Jones, R.I. (2014). Does the introduced

signal crayfish occupy an equivalent trophic niche to the lost native noble crayfish in boreal

lakes? Biol. Invasions DOI 10.1007/s10530-014-0645-x

130 Cremona, F., Timm, H., Agasild, H., Tõnno I., Feldmann T., Jones, R.I. & Nõges, T.

(2014). Benthic foodweb structure in a large shallow lake studied by stable isotope analysis.

Freshwater Science 33: 885–894.

129 Mariash, H.L., Devlin, S.P., Forsström, L. Jones, R.I. & Rautio, M. (2014). Benthic mats

offer a potential subsidy to pelagic consumers in tundra pond food webs. Limnol. Oceanogr.

59: 733-744. 128 Torniainen, J., Vuorinen, P.J., Jones, R.I., Keinänen, M., Palm, S., Vuori, K.A.M. &

Kiljunen, M. (2014). Migratory connectivity of two Baltic Sea salmon populations:

retrospective analysis using stable isotopes of scales. ICES J. Marine Sci. 71: 336-344.

127 Peura, S., Nykänen, H., Kankaala, P., Eiler, A., Tiirola, M. & Jones, R.I. (2014). Enhanced

greenhouse gas emissions and changes in plankton communities following an experimental

increase in organic carbon loading to a humic lake. Biogeochemistry 118: 177-197. 126 Agasild, H., Zingel, P., Tuvikene, L., Tuvikene, A., Timm, H., Feldmann, T., Salujöe, J.,

Toming, K., Jones, R.I. & Nöges, T. (2014). Biogenic methane contributes to the food web

of a large, shallow lake. Freshwater Biology 59: 272-285. 125 Pätynen, A., Elliott, J.A., Kiuru, P., Sarvala, J., Ventelä, A.-M. & Jones, R.I. (2014).

Modelling the impact of higher temperature on the phytoplankton of a boreal lake. Boreal

Env. Res. 19: 66-78.

124 Kankaala, P., Bellido, J.L., Ojala, A., Tulonen, T. & Jones, R.I. (2013). Variable

production by different pelagic energy mobilizers in boreal lakes. Ecosystems 16: 1152-

1164.

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123 Toming, K., Tuvikene, L., Vilbaste, S., Agasild, H., Viik, M., Kisand, A., Feldmann, T..

Martma, T., Jones, R.I. & Nöges, T. (2013). Contributions of autochthonous and

allochthonous sources to dissolved organic matter in a large, shallow, eutropic lake with a

highly calcareous catchment. Limnol. Oceanogr. 58: 1259-1270.

122 Enyidi, U., Kiljunen, M., Jones, R.I., Pirhonen, J. & Vielma, J. (2013). Nutrient

Assimilation by First-Feeding African Catfish, Clarias gariepinus, Assessed Using Stable

Isotope Analysis. Journal of the World Aquaculture Society 44: 161–172.

doi: 10.1111/jwas.12016

121 Jyväsjärvi, J., Boros, G., Jones, R.I. & Hämäläinen, H. (2013). The importance of

sedimenting organic matter, relative to oxygen and temperature, in structuring lake

profundal macroinvertebrate assemblages. Hydrobiologia 709: 55-72. 120 Syväranta. J, Lenssu, A., Marjomäki, T., Oksanen, S. & Jones, R.I. (2013). An empirical

evaluation of the utility of convex hull and standard ellipse areas for assessing population

niche widths from stable isotope data. PLoS ONE 8(2): e56094.

doi:10.1371/journal.pone.0056094 119 Boros, G., Jyväsjärvi, J., Takács, P., Mozsár, A., Tátrai, I., Søndergaard, M. & Jones, R.I.

(2012). Between-lake variation in the elemental composition of roach (Rutilus rutilus

L.). Aquatic Ecol. in press. 118 Peura, S., Eiler, A., Bertilsson, S., Nykänen, H., Tiirola, M. & Jones, R.I. (2012). Distinct

and diverse anaerobic bacterial communities in boreal lakes dominated by candidate

division OD1. The ISME Journal 6: 1640-1652. 116 Peura, S., Eiler, A., Hiltunen, M., Nykänen, H., Tiirola, M. & Jones, R.I. (2012). Bacterial

and phytoplankton responses to nutrient amendments in a boreal lake at different taxonomic

resolutions. PLoS ONE 7(6): e38552. doi:10.1371/journal.pone.0038552

116 Jones, R.I. & Grey, J. (2011). Special Review – Biogenic methane in freshwater food webs.

Freshwater Biol. 56: 213-229. 115 Taipale, S., Kankaala, P., Hahn, M.W., Jones, R.I. & Tiirola, M. (2011). Methane oxidizing

and photoautotrophic bacteria are major producers in a humic lake with large anoxic

hypolimnion. Aquat Microb Ecol. 64: 81–95.

114 Syväranta, J., Högmander, P., Keskinen, T., Karjalainen, J. & Jones, R.I. (2011). Altered

energy flow pathways in a lake ecosystem following manipulation of fish community

structure. Aquat. Sci. 73: 79-89. 113 Kankaala, P., Taipale, S., Li, L. & Jones, R.I. (2010). Diets of crustacean zooplankton,

inferred from stable carbon and nitrogen isotope analyses, in lakes with varying

allochthonous dissolved organic carbon content. Aquat. Ecol.44: 781-795.

112 Bjurstöm, L., Ruokonen, T., Pursiainen, M., Jones, R.I. & Hämäläinen, H., (2010). Impacts

of the invasive signal crayfish on littoral macroinvertebrates of large boreal lakes: a pilot

study in Lake Päijänne, Finland. Freshwater Crayfish 17: 177-182.

111 Rask, M., Verta, M., Korhonen, M., Salo, S., Forsius, M., Arvola,.L., Jones, R.I. &

Kiljunen, K. (2010). Does lake thermocline depth affect methyl mercury concentrations in

fish? Biogeochemistry 101: 311-322.

110 Kankaala, P., Peura, S., Nykänen, H., Sonninen, E., Taipale, S., Tiirola, M. & Jones, R.I.

(2010), Impacts of added dissolved organic carbon on boreal freshwater pelagic metabolism

and food webs in mesocosm experiments. Fund. Appl. Limnol. 177: 161-176.

109 Eloranta, A.P., Kahilainen, K.K. & Jones, R.I. (2010). Seasonal and onotogenetic shifts in

the diet of Arctic charr (Salvelinus alpinus) in a subarctic lake. J. Fish Biol. 77: 80-97.

108 Ravinet, M., Syväranta, J., Jones, R.I. & Grey, J. (2010). Fish exploitation of methane-

derived carbon in a temperate lake system. Oikos 119: 409-416.

107 King, L., Maberly, S.C., De Ville, M.M., Kitschke, M., Gibson, C.E. & Jones, R.I. (2009).

Nitrogen stable isotope ratios of lake macrophytes in relation to growth form and nutrient-

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limitation. Fund. Appl. Limnol. 175: 307-315.

106 Syväranta, J. & Jones, R.I. (2009). Isotopic variability in lake littoral organisms presents a

challenge for food web studies. Verh. int. Ver. Limnol. 30: 1193-1196.

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Taipale, S., Jones, R.I. & Tiirola, M. (2009). Vertical diversity of bacteria in an oxygen-

stratified humic lake evaluated using DNA and phospholipid analyses. Aquatic Microb.

Ecol. 55: 1-16.

104 Lehtiniemi, M., Kiljunen, M. & Jones, R.I. (2009). Winter food utilisation by sympatric

mysids in the Baltic Sea, studied by combined gut content and stable isotope analyses. Mar.

Biol. 156: 619-628.

103 Taipale, S., Kankaala, P., Hämäläinen, H. & Jones, R.I. (2009). Seasonal shifts in the diet

of lake zooplankton revealed by phospholipid fatty acid analysis. Freshwater Biol. 54: 90-

104.

102 Kiljunen, M., Peltonen, H., Jones, R.I., Kiviranta, H., Vuorinen, P.J. Verta, M. &

Karjalainen, J. (2008). Coupling stable isotopes with bioenergetics to evaluate sources of

variation in organochlorine concentrations in Baltic salmon (Salmo salar L.). Can. J. Fish.

Aquatic Sci. 65: 2114-2126.

101 Syväranta, J., Tiirola, M. & Jones, R.I. (2008). Seasonality in lake pelagic 15N values:

patterns, possible explanations, and implications for food web baselines. Fund. Appl.

Limnol. 172/3: 255-262.

100 Syväranta, J., Keskinen, T., Hämäläinen, H., Karjalainen, J. & Jones, R.I. (2008). Use of

stable isotope analysis to evaluate the possible impact of fish migration on a lake

biomanipulation. Aquatic Conserv: Mar. Freshw. Ecosyst. 18: 703-713.

99 Kelly, M.G., King, L., Jones, R.I., Barker, P.A. & Jamieson, B.J. (2008). Validation of

diatoms as proxies for phytobenthos when assessing ecological status in lakes.

Hydrobiologia 610: 125-129.

98 Jones, R.I., Carter, C.E., Kelly, A., Ward, S., Kelly, D.J. & Grey, J. (2008). Widespread

contribution of methane-cycle bacteria to the diets of lake profundal chironomid larvae.

Ecology 89: 857-864.

97 Syväranta, J., Vesala, S., Rask, M., Ruuhijärvi, J. & Jones, R.I. (2008). Evaluating the

utility of stable isotope analyses of archived freshwater sample materials. Hydrobiologia

600:121-130.

96 Taipale, S., Kankaala, P., Tiirola, M. & Jones, R.I. (2008). Whole-lake DI13C additions

reveal seasonal shifts between multiple food source contributions to zooplankton diet.

Ecology 89: 461-474.

95 Sinisalo, T., Jones, R.I., Helle, E. & Valtonen, E.T. (2008). Changes in diets of individual

Baltic ringed seals (Phoca hispida botnica) during their breeding season inferred from

stable isotope analysis of multiple tissues. Marine Mammal Sci. 24: 159-170.

94 Syväranta, J. & Jones, R.I. (2008). Changes in feeding niche widths of perch and roach

following biomanipulation, revealed by stable isotope analysis. Freshwater Biol. 53: 425-

434.

93 Taipale, S., Kankaala, P. & Jones, R.I. (2007). Contributions of different organic carbon

sources to Daphnia in the pelagic foodweb of a small polyhumic lake: results from

mesocosm DI13C-additions. Ecosystems 10: 757-772.

92 Kankaala, P., Eller, G. & Jones, R.I. (2007). Could bacterivorous zooplankton affect lake

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pelagic methanotrophic activity?. Fund. Appl. Limnol. 169: 203-209.

91 Kankaala, P., Taipale, S., Nykänen, H & Jones, R.I. (2007). Oxidation, efflux and isotopic

fractionation of methane during autumnal turnover in a polyhumic, boreal lake. J. Geophys.

Res.112, G02003, doi:10.1029/2006JG000336.

90 Rask, M., Jones, R.I., Järvinen, M., Paloheimo, A., Salonen, M., Syväranta, J. & Verta, M.

(2007). Changes in fish mercury concentrations over 20 years in an acidified lake subject to

experimental liming. Appl. Geochem. 22: 1229-1240.

89 Kiljunen, M., Vanhatalo, M., Mäntyniemi, S., Peltonen, H., Kuikka, S., Kiviranta, H.,

Parmanne, R., Tuomisto, J.T., Vuorinen, P.J., Hallikainen, A., Verta, M., Pönni, J., Jones,

R.I. & Karjalainen, J. (2007). Human dietary intake of organochlorines from Baltic herring:

Implications of individual fish variability and fisheries management. Ambio 36:257-264.

88 Jansson, M., Persson, L., De Roos, A.M., Jones, R.I. & Tranvik, L.J. (2007). Terrestrial

carbon and intraspecific size-structure shape lake ecosystems. Trends in Ecology and

Evolution 22: 316-322.

87 Clegg, M.R., Maberly, S.C. & Jones, R.I. (2007). Behavioral response as a predictor of

seasonal depth distribution and vertical niche separation in freshwater phytoplanktonic

flagellates. Limnol. Oceanogr. 52: 441-455.

86 Kiljunen, M., Grey, J., Sinisalo, T., Harrod, C., Immonen, H. & Jones, R.I. (2006). A

revised model for lipid normalising δ13C values from aquatic organisms, with implications

for isotope mixing models. J. Appl. Ecol. 43: 1213-1222.

85 Kankaala, P., Taipale, S., Grey, J., Sonninen, E., Arvola, L. & Jones, R.I. (2006).

Experimental 13C evidence for a contribution of methane to pelagic food webs in lakes.

Limnol. Oceanogr. 51: 2821-2827.

84 Sinisalo, T., Valtonen, E.T., Helle, E. & Jones, R.I. (2006). Combining stable isotope and

intestinal parasite information to evaluate dietary differences between individual ringed

seals (Phoca hispida botnica). Can. J. Zool. 84; 823-831.

83 Syväranta, J., Hämäläinen, H. & Jones, R.I. (2006). Within lake variability in carbon and

nitrogen stable isotope signatures. Freshwater Biol. 51: 1090-1102.

82 Thackeray, S.J., George, D.G., Jones, R.I., & Winfield, I.J. (2006). Statistical

quantification of the effect of thermal stratification on patterns of dispersion in a freshwater

zooplankton community. Aquatic Ecol. 40: 23-32.

81 Syväranta, J., Grey, J., Jones, R.I., Rask, M. & Salonen, M. (2006). The contribution of

trophic position to mercury content of pike (Esox lucius) in small boreal lakes. Verh. int.

Ver. Limnol. 29: 1757-1761.

80 Kiljunen, M., Rissanen, A. & Jones, R.I. (2006). Stable isotope analysis of two sympatric

Baltic Mysis species. Verh. int. Ver. Limnol. 29: 1223-1227.

79 Thackeray, S.J., George, D.G., Jones, R.I., & Winfield, I.J. (2005). Vertical heterogeneity

in zooplankton community structure: a variance partitioning approach. Archiv. Hydrobiol.

164: 257-275.

78 Jones, R.I. (2005). Limnology of humic waters: special theme or universal framework?

Verh. int. Ver. Limnol. 29: 51-60.

77 Thackeray, S.J., George, D.G., Jones, R.I. & Winfield, I.J. (2004). Quantitative analysis of

the importance of wind-induced circulation for the spatial structuring of planktonic

populations. Freshwater Biol. 49: 1091-1102.

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76 Kelly, A., Jones, R.I. & Grey, J. (2004). Stable isotope analysis provides fresh insights into

dietary niche separation between Chironomus anthracinus and C. plumosus. J. N. Am.

Benthol. Soc. 23: 287-296.

75 Grey, J., Kelly, A., Ward, S., Sommerwek, N. & Jones, R.I. (2004). Seasonal changes in

the stable isotope values of lake-dwelling chironomid larvae in relation to feeding and life

cycle variability. Freshwater Biol. 49: 681-689.

74 Grey, J., Kelly, A. & Jones, R.I. (2004). High intraspecific variability in carbon and

nitrogen stable isotope ratios of lake chironomid larvae. Limnol. Oceanogr. 49: 239-244.

73 Jones, R.I. & Grey, J. (2004). Stable isotope analysis of chironomid larvae from some

Finnish forest lakes indicates dietary contribution from biogenic methane. Boreal Env. Res.

9: 17-23.

72 Clegg, M.C., Maberly, S.C. & Jones, R.I. (2004). Dominance and compromise: the

interaction of behavioural preferences for conflicting gradients in freshwater

phytoplanktonic flagellates. Functional Ecol. 18: 371-380.

71 Clegg, M.C., Maberly, S.C. & Jones, R.I. (2004). Chemosensory behavioural response of

freshwater phytoplanktonic flagellates. Plant Cell Env. 27: 123-135.

70 Jones, R.I., King, L., Dent, M.M., Maberly, S.C. & Gibson, C.E. (2004). Nitrogen stable

isotope ratios in surface sediments, epilithon and macrophytes from upland lakes with

differing nutrient status. Freshwater Biol. 49: 382-391.

69 Maberly, S.C., King, L., Gibson, C.E, May, L., Jones, R.I., Dent, M.M. & Jordan, C.

(2003). Linking nutrient limitation and water chemistry in upland lakes to catchment

characteristics. Hydrobiologia 506-509:83-91.

68 Millett, J., Jones, R.I. & Waldron, S. (2003). The contribution of insect prey to the total

nitrogen content of sundews (Drosera spp.) determined in situ by stable isotope analysis.

New Phytol. 158: 527-534.

67 Clegg, M.C., Maberly, S.C. & Jones, R.I. (2003). Behavioural responses of freshwater

phytoplanktonic flagellates to a temperature gradient. Eur. J. Phycol. 38: 195-203.

66 Clegg, M.C., Maberly, S.C. & Jones, R.I. (2003). The effect of photon irradiance on the

behavioral ecology and potential niche separation of freshwater phytoplanktonic flagellates.

J. Phycol. 39: 650-662.

65 Maberly, S.C., King, L., Dent, M.M., Jones, R.I. & Gibson, C.E. (2002). Nutrient

limitation of phytoplankton and periphyton growth in upland lakes. Freshwater Biol. 47:

2136-2152.

64 Grey, J., Thackeray, S.J., Jones, R.I. & Shine, A.J. (2002). Ferox trout (Salmo trutta) as

“Russian Dolls”: complementary gut content and stable isotope analyses of the Loch Ness

food web. Freshwater Biol. 47: 1235-1243.

63 King, L., Jones, R.I. & Barker, P. (2002). Seasonal variation in the epilithic algal

communities from four lakes of different trophic state. Archiv. Hydrobiol. 154: 177-198.

62 King, L., Jones, R.I. & Barker, P. (2002). Spatial variation in epilithic algal communities

around an oligotrophic and a mesotrophic lake in the English Lake District. Verh. int. Ver.

Limnol. 28: 455-461.

61 Jones, R.I. & Feuchtmayr, H. (2002). Nutrient limitation of bacterioplankton growth in

three upland lakes. Verh. int. Ver. Limnol. 28: 97-101.

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60 Jones, R.I., Grey, J., Quarmby, C. & Sleep, D. (2001). Sources and fluxes of inorganic

carbon in a deep, oligotrophic lake (Loch Ness, Scotland). Global Biogeochem. Cycles 15:

863-870.

59 Grey, J., Jones, R.I. & Sleep, D. (2001). Seasonal changes in the importance of the source

of organic matter to the diet of zooplankton in Loch Ness, as indicated by stable isotope

analysis. Limnol. Oceanogr. 46: 505-513.

58 King, L., Barker, P. & Jones, R.I. (2000). Epilithic communities and their relationship to

environmental variables in lakes of the English Lake District. Freshwater Biol. 45: 425-442.

57 Shaw, P.J., Jones, R.I. & De Haan, H. (2000). The influence of humic substances on the

molecular size distributions of phosphate and iron in epilimnetic lake waters. Freshwater

Biol. 45: 383-393.

56 Grey, J., Jones, R.I. & Sleep, D. (2000). Stable isotope analysis of the origins of

zooplankton carbon in lakes of differing trophic state. Oecologia 123: 232-240.

55 Jones, R.I. (2000). Mixotrophy in planktonic protists: an overview. Freshwater Biol. 45:

219-226.

54 Jones, R.I. & Young, J.M. (2000). Control of bacterioplankton growth in three oligotrophic

lakes of differing humic content. Verh. int. Ver. Limnol. 27: 2917-2921.

53 King, L., Jones, R.I. & Barker, P.A. (2000). Periphyton response to nutrient manipulation

in an oligotrophic lake (Wastwater, English Lake District). Verh. int. Ver. Limnol. 27: 3154-

3158.

52 Jones, R.I., Grey, J., Sleep, D. & Arvola, L. (1999). Stable isotope analysis of zooplankton

carbon nutrition in humic lakes. Oikos 86: 97-104.

51 Grey, J. & Jones, R.I. (1999). Carbon isotope studies reveal complex trophic interactions in

lake plankton. Rapid Commun. Mass Spectrom. 13: 1311-1314.

50 Head, R.M., Jones, R.I. & Bailey-Watts, A.E. (1999). An assessment of the influence of

recruitment from the sediment on the development of planktonic populations of

cyanobacteria in a temperate mesotrophic lake. Freshwater Biol. 41: 759-769.

49 Head, R.M., Jones, R.I. & Bailey-Watts, A.E. (1999). Vertical movements by planktonic

cyanobacteria and the translocation of phosphorus: implications for lake restoration.

Aquatic Conserv: Mar. Freshw. Ecosyst. 9: 111-120.

48 Jones, R.I., Grey, J., Sleep, D. & Quarmby, C. (1998). An assessment using stable isotopes

of the importance of allochthonous organic carbon sources to the pelagic food web in Loch

Ness. Proc. Royal Soc. B 265: 105-111.

47 Jones, R.I. & Young, J.M. (1998). Control of bacterioplankton growth and abundance in a

deep oligotrophic lake (Loch Ness, Scotland). Aquat. Microb. Ecol. 15: 15-24.

46 Cooper, M.C., O’Sullivan, P.E., Harkness, D.D., Lawson, E.M., Bull, D., Kemp, A.E.S.,

Peglar, S.M., Matthews, N.M., Jones, R.I. & Shine, A.J. (1998). 14C dating of laminated

sediments from Loch Ness, Scotland. Radiocarbon 40: 781-793.

45 Head, R.M., Jones, R.I. & Bailey-Watts, A.E. (1998). Akinete germination and

recruitment of planktonic cyanobacteria from lake sediments. Verh. int. Ver. Limnol. 26:

1711-1715.

44 Jones, R.I., Laybourn-Parry, J., Walton, M.C. & Young, J.M. (1997). The forms and

distribution of carbon in a deep oligotrophic lake (Loch Ness, Scotland). Verh. int. Ver.

8

Limnol. 26: 330-334.

43 Jones, R.I., Young, J.M., Hartley, A.M. & Bailey-Watts, A.E. (1996). Light limitation of

phytoplankton development in an oligotrophic lake - Loch Ness, Scotland. Freshwater

Biol. 35: 533-543.

42 Shaw, P.J., Jones, R.I. & De Haan, H. (1996). Contrasting experimental manipulations of

the acidity of catchment drainage water: effects on interactions between humic substances,

iron, and phosphate. Environment International 22: 611-618.

41 Jones, R.I., Fulcher, A., Jayakodi, U., Laybourn-Parry, J., Shine, A., Walton, M. & Young,

J. (1995). The horizontal distribution of plankton in a deep, oligotrophic lake - Loch Ness,

Scotland. Freshwater Biol. 33: 161-170.

40 Laybourn-Parry, J., Walton, M., Young, J., Jones, R.I. & Shine, A. (1994).

Protozooplankton and bacterioplankton in a large oligotrophic lake - Loch Ness, Scotland.

J. Plankton Res. 16: 1655-1670.

39 Young, J., Laybourn-Parry, J., Jones, R.I. & Walton, M. (1994). A stalkless sub-species of

Clathrulina elegans Cienkowski (1867) from the plankton of Loch Ness, Scotland. Europ.

J. Protistol. 31: 54-57.

38 Salonen, K., Jones, R.I., De Haan, H. & James, M. (1994). A radiotracer study of

phosphorus uptake by plankton and redistribution within the water column of a small humic

lake. Limnol. Oceanogr. 39: 69-83.

37 Jones, R.I. (1994). Mixotrophy in planktonic protists as a spectrum of nutritional strategies.

Mar. microb. Food Webs. 8: 87-96.

36 Jones, R.I. & Rees, S. (1994). Characteristics of particle uptake by the phagotrophic

phytoflagellate, Dinobryon divergens. Mar. microb. Food Webs. 8: 97-110.

35 Jones, R.I. & Rees, S. (1994). Influence of temperature and light on particle ingestion by

the freshwater phytoflagellate Dinobryon. Archiv Hydrobiol. 132: 203-211.

34 Perriss, S.J., Laybourn-Parry, J. & Jones, R.I. (1994). Chlorophyll contents and

photosynthetic rates of the mixotrophic ciliate Strombidium viridis (Ciliophora:

Oligotrichida). Arch. Hydrobiol. 130: 473-483.

33 Väinölä, R., Riddoch, B.J., Ward, R.D. & Jones, R.I. (1994). Genetic zoogeography of the

Mysis relicta species group in northern Europe and North America. Can. J. Fish. Aquatic

Sci. 51: 1490-1505.

32 Shaw, P.J., De Haan, H. & Jones, R.I. (1994). Applicability and reliability of gel filtration

to study aquatic humic substances revisited; the effects of pH on molecular size

distributions. Environ. Technol. 15: 753-764.

31 Shaw, P.J., Jones, R.I. & De haan, H. (1994). Separation of molecular size classes of humic

substances using ultrafiltration and dialysis. Environ. Technol. 15: 765-774.

30 Jones, R.I., Shaw, P.J. & De Haan, H. (1993). Effects of dissolved humic substances on the

speciation of iron and phosphate at different pH and ionic strength. Environ. Sci. Technol.

27: 1052-1059.

29 Ojala, A. & Jones, R.I. (1993). Spring development and mitotic division pattern of a

Cryptomonas sp. in an acidified lake. Eur. J. Phycol. 28: 17-24.

28 Jones, R.I. (1993) Phytoplankton migrations: patterns, processes and profits. Arch.

Hydrobiol. Beih. Ergebn. Limnol. 39: 67-77.

9

27 Jones, R.I. (1992). The influence of humic substances on lacustrine planktonic food chains.

Hydrobiologia 229: 73-91.

26 Jones, R.I. (1992). Phosphorus transformations in the epilimnia of small forest lakes.

Hydrobiologia 243/244: 105-111.

25 Shaw, P.J., De Haan, H. & Jones, R.I. (1992). The effect of acidification on abiotic

interactions of dissolved humic substances, iron and phosphate in epilimnetic water from

the HUMEX Lake Skjervatjern. Environment. International 18: 577-588.

24 Jones, R.I. (1991). Advantages of diurnal vertical migrations to phytoplankton in sharply

stratified, humic forest lakes. Arch. Hydrobiol. 120: 257-266.

23 Jones, R.I. (1990). Phosphorus transformations in the epilimnion of humic lakes: biological

uptake of phosphate. Freshwater Biol. 23: 323-337.

22 Haan, H.De, Jones, R.I. & Salonen, K. (1990). Abiotic transformations of iron and

phosphate in humic lake water, revealed by double isotope labelling and gel filtration.

Limnol. & Oceanogr. 35: 491-497.

21 Jones, R.I., Salonen, K. & Haan, H.De. (1988). Phosphorus transformations in the

epilimnion of humic lakes: abiotic interactions between dissolved humic materials and

phosphate. Freshwater Biol. 19: 357-369.

20 Jones, R.I. (1988). Vertical distribution and diel migration of flagellated phytoplankton in a

small humic lake. Hydrobiologia 161: 75-87.

19 Arvola, L., Salonen,K., Jones, R.I., Heinanen, A. & Bergström, I. (1987). A three day study

of the diel behaviour of plankton in a highly humic and steeply stratified lake. Arch.

Hydrobiol. 109: 89-106.

18 Haan, H.De., Jones, R.I. & Salonen, K. (1987). Does ionic strength affect the configuration

of aquatic humic substances, as indicated by gel filtration? Freshwater Biol. 17: 453-459.

17 Jones, R.I. & Salonen, K. (1985). Bacterial utilization of released photosynthate in two

humic forest lakes in southern Finland. Holarctic Ecol. 8: 133-140.

16 Jones, R.I. & Barrington, R.J. (1985). A study of the suspended algae in the River Derwent,

Derbyshire, U.K. Hydrobiologia 128: 255-264.

15 Salonen, K., Jones, R.I. & Arvola, L. (1984). Hypolimnetic phosphorus retrieval by diel

vertical migrations of lake phytoplankton. Freshwater Biol. 14: 431-438.

14 Jones, R.I. & Arvola, L. (1984). Light penetration and some related characteristics in small

forest lakes in southern Finland. Verh. int. Ver. Limnol. 22: 811-816.

13 Jones, R.I. & Ilmavirta, V. (1983). Spatial heterogeneity of phytoplankton in the Lokka

reservoir, Finnish Lapland. Ann. bot. fenn. 20: 391-397.

12 Jones, R.I. & Francis, R.C. (1982). Dispersion patterns of phytoplankton in lakes.

Hydrobiologia 86: 21-28.

11 Jones, R.I. (1979). Notes on the growth and sporulation of a natural population of

Aphanizomenon flos-aquae. Hydrobiologia 62: 55-58.

10 Jones, R.I. (1978). Adaptations to fluctuating irradiance by natural phytoplankton

communities. Limnol. Oceanogr. 23: 920-926.

9 Jones, R.I. & Ilmavirta. V. (1978). Vertical and seasonal variation of phytoplankton

photosynthesis in a brownwater lake with winter ice cover. Freshwater Biol. 8: 561-572.

10

8 Jones, R.I. & Ilmavirta, V. (1978). A diurnal study of the phyto- plankton in the eutrophic

lake Lovojärvi, southern Finland. Arch. Hydrobiol. 83: 494-514.

7 Jones, R.I. (1977). Factors controlling phytoplankton production and succession in a highly

eutrophic lake (Kinnego Bay, Lough Neagh). I. The phytoplankton community and its

environment. J. Ecol. 65: 547-559.

6 Jones, R.I. (1977). Factors controlling phytoplankton production and succession in a highly

eutrophic lake (Kinnego Bay, Lough Neagh). II. Phytoplankton production and its chief

determinants. J. Ecol. 65: 561-577.

5 Jones, R.I. (1977). Factors controlling phytoplankton production and succession in a highly

eutrophic lake (Kinnego Bay, Lough Neagh). III. Interspecific competition in relation to

irradiance and temperature. J. Ecol. 65: 579-586.

4 Jones, R.I. (1977). The importance of temperature conditioning to the respiration of natural

phytoplankton communities. Br. phycol. J. 12: 277-285.

3 Ilmavirta, V., Jones, R.I. & Kairesalo, T. (1977). The structure and photosynthetic activity

of pelagial and littoral phytoplankton communities in Lake Pääjärvi, southern Finland. Ann.

bot. fenn. 14: 7-16.

2 Jones, R.I. (1977).A comparison of acetone and methanol as solvents for estimating the

chlorophll a and phaeophytin a concentrations in phytoplankton. Ann. bot. fenn. 14: 65-69.

1 Ilmavirta, V. & Jones R.I. (1977). Factors affecting the 14C method of measuring

phytoplankton production. Ann.bot. fenn. 14: 97-101.

Edited Conference Proceedings

4 Ilmavirta, V. & Jones, R.I. (editors) (1992). The Dynamics and Use of Lacustrine

Ecosystems. Developments in Hydrobiology. Kluwer Academic Publishers, Dordrecht,

498pp.

3 Salonen, K., Kairesalo, T. & Jones, R.I. (editors) (1992). Dissolved Organic Matter in

Lacustrine Ecosystems: Energy Source and System Regulator. Developments in

Hydrobiology. Kluwer Academic Publishers, Dordrecht , 291pp.

2 Jones, R.I. & Ilmavirta, V. (editors) (1988). Flagellates in Freshwater Ecosystems.

Developments in Hydrobiology 45. Kluwer Academic Publishers, Dordrecht, 279pp.

1 Ilmavirta, V., Jones, R.I. & Persson, P.-E. (editors) (1982). Lakes and Water Management.

Developments in Hydrobiology 7. Dr. W. Junk, The Hague, 222pp.

Articles in Books and Conference Proceedings

3 Jones, R.I. (1998). Chapter 7: Phytoplankton, primary production and nutrient cycling. In:

Hessen, D.O. & Tranvik, L. (Editors) Aquatic Humic Substances: Ecology and

Biogeochemistry. Ecological Studies 133, Springer-Verlag, pp 145-175.

2 Ward, R.D. & Jones, R.I. (1993). A note of genetic variation in Lough Neagh Mysis relicta.

In: Wood, R.B. & Smith, R.V. (editors) Lough Neagh. Monographiae Biologicae, Kluwer

Academic Publishers, Dordrecht, p. 336.

1 Jones, R.I. & Ilmavirta, V. (1988). Concluding remarks. In: Jones, R.I. & Ilmavirta, V.

(editors) Flagellates in Freshwater Ecosystems. Developments in Hydrobiology 45. Kluwer

Academic Publishers, Dordrecht, pp 271-274.

11

Other articles and published abstracts

25 Clegg, M.R., Maberly, S.C. & Jones, R.I. (2003). Behavioural responses of freshwater

flagellates: a new perspective on ecological distribution. The Phycologist 58 (Supplement):

2.

24 Burns, A.J., Jones, R.I. & Adamson, J.K. (2001). Stable isotope analysis of food web

structure in upland rivers (Abstract). Verh. int. Ver. Limnol. 27: 3286.

23 King, L., Dent, M.M., Gibson, C.E., Jones, R.I. & Maberly, S.C. (2001). Paradigm lost:-

does phosphorus limitation prevail in upland oligotrophic lakes? The Phycologist 64

(Supplement): 7.

22 Clegg, M.R., Maberly, S.C. & Jones, R.I. (2001). Behavioural ecology of freshwater

phytoflagellates. The Phycologist 58 (Supplement): 20.

21 Thackeray, S.J., Grey, J. & Jones, R.I. (2000). Feeding selectivity in brown trout (Salmo

trutta) in Loch Ness. Freshwater Forum 13: 47-59.

20 Jones, R.I. (2000). Cutting Edge. Times Higher Education Supplement, February 25.

19 Clegg, M.R., Maberly, S.C. & Jones, R.I. (2000). Effect of irradiance on the behavioural

ecology of freshwater phytoplankton flagellates. The Phycologist 55 (Supplement): 22-23.

18 Jones, R.I. & Grey, J. (1999). Unravelling a mystery in Loch Ness. NERC News, Winter

1999: 8-9.

17 King, L., Jones, R.I. & Barker, P. (1999). Periphyton response to nutrient manipulation at

Wastwater (English Lake District) (Abstract). The Phycologist 52 (Supplement): 11.

16 Watson, A.G., Jones, R.I. & Eccleston-Parry, J.D. (1999). Responses of phytoplankton

communities, from two contrasting lakes, to a nutrient pulsed environment (Abstract). The

Phycologist 52 (Supplement): 26.

15 King, L., Jones, R.I. & Barker, P. (1998). Periphyton response to nutrient manipulation in

lakes of different trophic state (Abstract). The Phycologist 49: 37.

14 Watson, A.G., Jones, R.I. & Eccleston-Parry, J.D. (1998). Nutrient patchiness and

phytoplankton competition (Abstract). The Phycologist 49: 42-43.

13 Watson, A.G., Jones, R.I. & Eccleston-Parry, J.D. (1997). Cell size, nutrient pulsing and

competition for phosphorus. The Phycologist 46: 39.

12 Jones, R.I. & Young, J.M. (1996). Autotrophic picoplankton in Loch Ness, Scotland

(Abstract). The Phycologist 43: 24.

11 Head, R.M., Jones, R.I. & Bailey-Watts, A.E. (1996). The distribution of Anabaena

solitaria akinetes in the upper sediments of a small lake (Abstract). The Phycologist 43: 22.

10 Jones, R.I. (1995). Light, not phosphorus, limits phytoplankton in oligotrophic Loch Ness

(Abstract). The Phycologist 40: 22-23.

9 Head, R.M., Jones, R.I. & Bailey-Watts, A.E. (1994). The role of recruitment from the

benthos in the population dynamics of blue-green algae in a mesotrophic lake (Abstract).

The Phycologist 37:44-45.

8 Jones, R.I., Shaw, P.J. & De Haan, H. (1993). Effects of dissolved humic substances on the

speciation of iron and phosphate at different pH and ionic strength (Abstract). Verh. int.

Ver. Limnol. 25: 163.

12

7 Young, J.M., Jones, R.I. & Bailey-Watts, A.E. (1993). Studies of the plankton of Loch

Ness, Scotland. 1. Phytoplankton (Abstract). Verh. int. Ver. Limnol. 25: 458.

6 Shaw, P.J., Jones, R.I. & De Haan, H. (1993). Quantifying the effect of pH on the

molecular size distribution of aquatic humic substances from Lake Skjervatjern after

acidification. HUMOR/HUMEX Newsletter 1/1993: 4-5.

5 Shaw, P.J., Jones, R.I. & De Haan, H. (1992). The effect of pH on abiotic interactions

between aquatic humic substances and nutrients. HUMOR/HUMEX Newsletter 1/1992: 2-

3.

4 Rees, S. & Jones, R.I. (1992). Phagotrophic nutrition of phytoflagellates (Abstract). Br.

phycol. J. 27: 100.

3 Shaw, P.J., Jones, R.I. & De Haan, H. (1992). The effect of acidification on abiotic

interactions of dissolved humic substances, iron and phosphate in epilimnetic water from

the HUMEX lake. HUMOR/HUMEX Newsletter 2/1992: 23.

2 Jones, R.I. & Shaw, P.J. (1991). Abiotic interactions between humic substances and

nutrients: application of gel filtration. HUMOR/HUMEX Newsletter 1/1991: 25-27.

1 Jones, R.I. (1987). The influence of humic substances on phosphorus turnover in forest

lakes. Bulletin Br. Ecol. Soc. 18: 19-21.

Book Reviews

7 Jones, R.I. (1998). Review of Vegetation Processes in the Pelagic: A Model for Ecosystem

Theory by C.S. Reynolds. J. Animal Ecol. 67: 161.

6 Jones, R.I. (1998). Review of Aquatic Photosynthesis by P.G. Falkowski and J.A. Raven. J.

Exp. Bot. 49: 621.

5 Jones, R.I. (1996). Review of Algae: an Introduction to Phycology. by C. van den Hoek,

D.G. Mann and H.M. Jahns. J. Exp. Bot. 47: 1811.

4 Jones, R.I. (1993). Review of The Biology of Free-living Heterotrophic Flagellates by D.J.

Patterson and J. Larsen (Editors). Eur. J. Phycol., 28:199-200.

3 Jones, R.I. (1993). Review of Algae and Symbioses: Plants, Animals, Fungi, Viruses,

Interactions Explored by W. Reisser (Editor). Eur. J. Phycol., 28: 201.

2 Jones, R.I. (1990). Review of Growth and Reproductive Strategies of Freshwater

Phytoplankton by C.D. Sandgren (Editor). Br. phycol. J., 25:300.

1 Jones, R.I. (1985). Review of The Ecology of Freshwater Phytoplankton by C.S. Reynolds.

J. Ecol., 73: 722-723.

Miscellaneous

3 Jones, R.I. (1993). Editorial. Eur. J. Phycol. 28: 1.

2 Jones, R.I. (1992). Environmental education and training in England. In: Proceedings of a

Conference on "Requirements and Prospects for Science and Engineering Education and

Training Raised by Environmental Issues", Helsinki, May 1991 Maj and Tor Nessling

Foundation, Helsinki.

1 "Don's Diary". Times Higher Education Supplement 1981.