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Small molecular weight metabolites regulating growth and immunity as postbiotic antibiotic alternatives Inkyung Park Animal Bioscience and Biotechnology Laboratory, Beltsville Agricultural Research Center, Agricultural Research Service, USDA, MD 20705

Small molecular weight metabolites regulating growth and ... › alternativestoantibiotics...Body weight gain of chickens Body weight gain = final body weight – initial body weight

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  • Small molecular weight metabolites regulating growth and immunity as

    postbiotic antibiotic alternatives

    Inkyung Park

    Animal Bioscience and Biotechnology Laboratory, Beltsville Agricultural Research Center, Agricultural Research Service, USDA, MD 20705

  • Introduction: antibiotic alternatives

    • Avian coccidiosis with Emeria spp

    • Necrotic enteritis

    • With AGP withdrawal, there is an urgent need to develop antibiotic alternatives. Gallucci and Matzinger, 2001; Shirley and Lillehoj, 2012

    0.00

    0.50

    1.00

    1.50

    2.00

    2.50

    3.00

    0

    20

    40

    60

    80

    100

    120

    1925

    1945

    1960

    1975

    1990

    2005

    2008

    2011

    2014

    2017

    Mar

    ket

    wei

    ght,

    kg

    Mar

    ket

    age,

    d

    Years

    Market age and weight since 1925 (chickens)

  • • Bacillus subtilis as probiotics in chicken feed

    - Shows growth-promoting effect (Gadde et al. 2017)

    - Shows a protective role against chicken pathogen (Park et al. 2019)

    * * *

    0.00E+00

    5.00E-06

    1.00E-05

    1.50E-05

    2.00E-05

    2.50E-05

    3.00E-05

    3.50E-05

    4.00E-05

    CON BMD PB1 PB2 PB3

    Mea

    n n

    orm

    aliz

    ed e

    xpre

    ssio

    n

    IL6 in ileum

    * *

    0.0E+00

    2.0E-03

    4.0E-03

    6.0E-03

    8.0E-03

    1.0E-02

    CON BMD PB1 PB2 PB3

    Mea

    n n

    orm

    aliz

    ed e

    xpre

    ssio

    n

    Occludin in ileum

    Bacillus subtilis by Nano Creative/Science Source

    (Gadde et al. 2018)

    * *

    200

    250

    300

    350

    400

    450

    500

    CON BMD PB1 PB2 PB3

    Ave

    rage

    bo

    dy

    we

    igh

    t, g

    Body weight (D 14)

    ― Con: basal diet ― BMD: antibiotics ― PB1: B. subtilis 1781 ― PB2: B. subtilis 747 ― PB3: B. subtilis 1781+747

    Introduction: antibiotic alternatives

  • • What is the mechanisms of dietary Bacillus subtilis supplementation?

    Introduction: gut microbiota and metabolites

    “Postbiotics” novel materials promoting gut health as functional additive of diet

  • Objective of this study

    • Therefore, the current study was undertaken to characterize the metabolic alterations in the chicken gut following dietary supplementation with B. subtilis DFMs with the goal of identifying potential chemical compounds that might be directly used to improve poultry growth performance without the use of AGPs.

  • Materials and Methods

    84 male day-old Ross 708 broilers

    d 0

    Normal feed

    d 14 d 21

    • Initial body weight • Allocation to 3 treatments

    Measurements: • Metabolomic profiling of

    the ileal contents by mass spectrometry (Metabolon, Durham, NC)

    ileal content from euthanized chciekn (2 chickens/pen = total 8 chickens/treatment)

    • Body weight • Feed intake

    Experimental feed

    Treatments Supplements Dose Chickens/cage Replication

    CON Basal diet 7 4

    B. subtilis 1781 CON+B. subtilis 1781 1.5 × 105 CFU/g feed 7 4

    B. subtilis 747 CON+B. subtilis 747 1.5 × 105 CFU/g feed 7 4

    • B. subtilis strains were obtained from Church & Dwight Co. Inc. (Waukesha, WI).

    Metabolic pathways

  • • Statistical Analysis

    • Growth performance

    - PROC MIXED in SAS (SAS Inst. Inc., Cary NC)

    - P values < 0.05

    - PDIFF option

    • Ileal biochemicals

    - Array Studio software (OmicSoft, Cary, NC)

    - the programs R (R Foundation for Statistical Computing, Vienna, Austria)

    - JMP (SAS Institute)

    - P values < 0.05

    - Random Forest Analysis (RFA) by computing the Mean Decrease Accuracy

    Materials and Methods

  • a

    b b

    320

    340

    360

    380

    400

    Control B. subtilis 1781 B. subtilis 747

    Bo

    dy

    wei

    gh g

    ain

    , g

    Body weight gain of chickens

    Body weight gain = final body weight – initial body weight

    Control

    B. subtilis 1781

    B. Subtilis 747

    -20 -10 0 10 20 30 40 50

    Comp.1 [24.43%]

    -20

    -10

    0

    10

    20

    30

    Co

    mp

    .2 [11

    .99

    %]

    Co

    mp

    2 (

    11.9

    9)

    Comp 1 (24.43)

    Principal component analysis of ileal biochemicals

    Result: growth effect and biochemical distribution

  • Result: hierarchical clustering heatmap

    Control

    B. subtilis 1781

    B. subtilis 747

    -4.00 4.00

    • Total 674 biochemicals

    • Con vs B. subtilis 1781 - Increased 209 (25; P < 0.05) - Decreased 461 (58; P < 0.05)

    • Con vs B. subtilis 747 - Increased 265 (12; P < 0.05) - Decreased 402 (38; P < 0.05)

    Bio

    che

    mic

    al p

    rofi

    les

  • Result: after B. subtilis 1781 and 747 treatment

    • 193 amino acid pathways

    • 32 carbohydrate pathways

    • 263 lipid pathways

    • 42 cofactors and vitamins pathways

    • 51 nucleotide pathways

    • 12 energy pathways

    • 81 unknown pathways

    • 498 Human Metabolome Database (HMDB)

    • 336 Kyoto Encyclopedia of Genes and Genomes (KEGG) codes

    Result: pathways in this study B

    ioch

    em

    ical

    pro

    file

    s

  • CON vs B. subtilis 1781

    Result: random forest analysis and plot

    • 8 amino acids (26.7%) - 2-hydroxy-4-

    (methylthio)butanoic acid - 3-(4-hydroyphenyl)lactate - beta-hydroxycholate - creatine - cystein s-sulfate - N-methylproline - glutamate gamma-methyl

    ester - dimethylglycine

    • 8 lipids (26.7%) - 2,4-dihydroxybutyrate - glycerophosphoethanolamine - 2R 3R-dihydroxybutyrate - chenodeoxycholte - 16-hydroxypalmitate - beta-sitosterol - 1-palmitoyl-

    digalactosylglycerol (16:0) - octadecenedioate

    • 5 vitamins and cofactors (16.7%) - carotene diol - alpha-tocopherol acetate - beta-cryptoxanthin - nicotinamide adenine dinucleotide (NAD+) - alpha-tocopherol

    • 3 nucleotides (10.0%) - 2’deoxyguanosine - N6-methyladenosine - N1-methyladenosine

  • Result: random forest analysis and plot

    CON vs B. subtilis 747 • 6 amino acids (20.0%) - glutamate gamma-methyl ester - betaine - taurine - dimethylglycine - 5-hydroxyindoleacetate - methylsuccinate

    • 6 peptides (20.0%)

    - glutaminylleucine - alanylleucine - valylleucine - leucylglycine - leucylalanine - valylglycine

    • 10 lipids (33.0%) - 6-oxolithocholate - oleoylcholine - glycerophosphoglycerol - sebacate (C10-DC) - 2-hydroxyglutarate - palmitoylcholine - linoleoylcholine - 3-dehydrodeoxycholate - chenodeoxycholate - stearoylcarnitine (C18)

    • 2 nucleotides (0.1 %) - uridine 5’-monophosphate (UMP) - guanine

  • Alanylleucine

    Met

    abo

    lite

    Sign

    al

    (Med

    ium

    Sca

    led

    Sig

    nal

    Inte

    nsi

    ty)

    Control B. subtilis B. subtilis 1781 747

    Glutaminylleucine

    Control B. subtilis B. subtilis 1781 747

    Control B. subtilis B. subtilis 1781 747

    Glycylisoleucine

    Valylleucine

    Met

    abo

    lite

    Sign

    al

    (Med

    ium

    Sca

    led

    Sig

    nal

    Inte

    nsi

    ty)

    Control B. subtilis B. subtilis 1781 747

    Phenylalanylalanine

    Control B. subtilis B. subtilis 1781 747

    Valylglutamine

    Control B. subtilis B. subtilis 1781 747

    Result: amino acids (dipeptides)

  • Chenodeoxycholate

    Control B. subtilis B. subtilis 1781 747

    3-dehydrodeoxycholate

    Control B. subtilis B. subtilis 1781 747

    Cholesterol

    Control B. subtilis B. subtilis 1781 747

    Sebacate (C10-DC)

    Control B. subtilis B. subtilis 1781 747

    Linoleoylcholine

    Control B. subtilis B. subtilis 1781 747

    Valerylglycine (C5)

    Control B. subtilis B. subtilis 1781 747

    Met

    abo

    lite

    Sign

    al

    (Med

    ium

    Sca

    led

    Sig

    nal

    Inte

    nsi

    ty)

    M

    etab

    olit

    e Si

    gnal

    (M

    ediu

    m S

    cale

    d S

    ign

    al In

    ten

    sity

    )

    Result: lipids

    Miyamoto et al., 2015

  • Met

    abo

    lite

    Sign

    al

    (Med

    ium

    Sca

    led

    Sig

    nal

    Inte

    nsi

    ty)

    Control B. subtilis B. subtilis 1781 747

    N1-methyladenosine N6-methyladenosine

    Control B. subtilis B. subtilis 1781 747

    Guanine

    Control B. subtilis B. subtilis 1781 747

    Control B. subtilis B. subtilis 1781 747

    Met

    abo

    lite

    Sign

    al

    (Med

    ium

    Sca

    led

    Sig

    nal

    Inte

    nsi

    ty)

    2-deoxyguanosine Uridine 5-monophosphate

    Control B. subtilis B. subtilis 1781 747

    Control B. subtilis B. subtilis 1781 747

    Cytidine

    Result: nucleotides

    N1-methyladenosine

    N6-methyladenosine

    Guanine

    2-deoxyguanosine

    Donia and Fischbach, Science, 2015

  • 2-(4-hydroxyphenyl)propionate

    Met

    abo

    lite

    Sign

    al

    (Med

    ium

    Sca

    led

    Sig

    nal

    In

    ten

    sity

    )

    Control B. subtilis B. subtilis 1781 747

    Salicylate-glucoside

    Control B. subtilis B. subtilis 1781 747

    Nicotinamide ribonucleotide (NMN)

    Met

    abo

    lite

    Sign

    al

    (Med

    ium

    Sca

    led

    Sig

    nal

    In

    ten

    sity

    )

    Nicotinamide adenine dinucleotide (NAD+)

    Fructose Lactate

    Met

    abo

    lite

    Sign

    al

    (Med

    ium

    Sca

    led

    Sig

    nal

    In

    ten

    sity

    )

    Control B. subtilis B. subtilis 1781 747

    Control B. subtilis B. subtilis 1781 747

    Control B. subtilis B. subtilis 1781 747

    Control B. subtilis B. subtilis 1781 747

    Result: others

    Polyphenol

    Fructose

    Fructose feeding negatively affects antioxidant

    capacity in the blood of hypertensive rats but

    improves this capacity in the liver (Girard et al., 2006, Nutrition).

    Lactate ion may prevent lipid peroxidation by

    scavenging free radicals such as O2- and -OH

    but not lipid radicals (Groussard et al., 2000, J Appl Physiol).

    epithelial barrier

    Strong antioxidant

    Antioxidant effects in the gut or

    organs

  • Conclusions

    • Dietary supplementation with B. subtilis has profound effects on the levels of a wide variety of chemical metabolites in the chicken gut.

    • These altered metabolite levels provide a biochemical signature unique to each B. subtilis supplementation group.

    • Future studies are warranted to assess the growth promoting properties, if any, of the identified chemical compounds in lieu of antibiotics.

  • Further study: extra data

    Chicken macrophage cells (HD11)

    40 metabolites of Up-regulated common metabolites between B. subtilis 1781 and 747

    Proinflammatory responses

    Chicken epithelial cells (8E11)

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    0.25

    CON LPS 0.1 ug/mL 1.0 ug/mL 10.0 ug/mL

    Mea

    n n

    orm

    aliz

    ed e

    xpre

    ssio

    n

    IL6

    0

    0.1

    0.2

    0.3

    0.4

    0.5

    CON LPS 0.1 ug/mL 1.0 ug/mL 10.0 ug/mL

    IL1β

    0.E+00

    5.E-05

    1.E-04

    2.E-04

    2.E-04

    3.E-04

    3.E-04

    4.E-04

    4.E-04

    CON LPS 0.1 ug/mL 1.0 ug/mL 10.0 ug/mL

    IL6

    -20

    0

    20

    40

    60

    80

    100

    120

    CON LPS 0.1 ug/mL 1.0 ug/mL 10.0 ug/mL

    Mea

    n n

    orm

    aliz

    ed e

    xpre

    ssio

    n IL8

    N-acetylglucosamine Syringic acid

    2'-deoxyadenosine β-alanine

  • Acknowledgment

    USDA-ARS • Dr. Hyun S. Lillehoj

    Church & Dwight • Dr. N. P. Zimmerman • Dr. A. H. Smith • Dr. T. Rehberger

  • Thank you !