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NATURE CHEMISTRY | www.nature.com/naturechemistry 1
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
A stable heavier group 14 analogue of vinylidene Arnab Rit,1 Jesús Campos,1 Haoyu Niu,1 and Simon Aldridge*,1
Supplementary Information 1. General considerations and starting material preparations 2 2. Synthetic, spectroscopic and analytical data for new compounds 3 3. X-ray crystallographic studies 14 4. Computational details 18 5. TD-DFT 77 6. References for supporting information 79
A stable heavier group 14 analogue of vinylidene Arnab Rit,1 Jesús Campos,1 Haoyu Niu,1 and Simon Aldridge*,1
Supplementary Information 1. General considerations and starting material preparations 2 2. Synthetic, spectroscopic and analytical data for new compounds 3 3. X-ray crystallographic studies 14 4. Computational details 18 5. TD-DFT 77 6. References for supporting information 79
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1. General considerations and starting material preparation All manipulations were carried out using standard Schlenk line or dry-box techniques under an atmosphere of argon. With the exception of Et2O and THF, solvents were degassed by sparging with argon and dried by passing through a column of appropriate drying agent using a commercially available Braun SPS and stored over potassium1; Et2O and THF were dried by refluxing over Na/benzophenone, distilled, sparged and stored over potassium (Et2O) and activated molecular sieves (THF). NMR spectra were measured in C6D6; C6D6 was dried over potassium and was stored under argon in Teflon valve ampoules. 1H, 11B{1H} and 13C{1H} NMR spectra were recorded on Bruker AVII HD NanoBay 400 or Bruker AVII-500 spectrometers and chemical shifts are referenced to the residual protons of the deuterated solvents for proton chemical shifts, the 13C{1H} signal of deuterated solvents for carbon chemical shifts, and Et2O.BF3 for 11B{1H} chemical shifts. Chemical shifts are quoted in δ (ppm) and coupling constants in Hz. Elemental analyses were carried out at London Metropolitan University and at Elemental Microanalysis Ltd., Devon. UK. The cyclic voltammetry measurements were performed with a silver quasi-reference electrode, a platinum working electrode and a platinum wire auxiliary electrode in a supporting electrolyte of a solution of 0.10 M [nBu4N][PF6] electrolyte in THF. UV-vis spectra were collected on a Scintio UV S-2100 UV/Vis spectrometer.
Starting materials IPr2Me2 (Ref. 2), (thf)2Li{B(NDippCH)2} (Ref. 3), (IPr2Me2)GeCl2 (Ref 4.), and
[{HC(MeCMesN)2}Mg]2, (Ref. 5) were prepared according to literature procedures and KC8 was synthesized by minor modification of the reported procedure.6 All other chemicals were sourced commercially and used after appropriate purification.
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2. Synthetic, spectroscopic and analytical data for new compounds
[(IPr2Me2)GeCl{B(DippNCH)2}] (1) To a solution of (IPr2Me2)GeCl2
(0.648 g, 2.0 mmol) in Et2O (10 mL) at -35 ̊C was slowly added a pre-cooled (-35 ̊C) solution of (thf)2Li{B(NDippCH)2} (1.074 g, 2.00 mmol) in Et2O (10 mL). After stirring for 30 min at this temperature, the reaction mixture was gradually warmed to ambient temperature and stirred for 2.5 h. The reaction mixture was subsequently evaporated to dryness and extracted with toluene. The filtrate was evaporated and triturated with hexane (5 mL). After storing at -35 ̊C overnight the precipitated pale-yellow solid was isolated and dried in vacuo. Yield: 1.013 g (1.5 mmol, 75%). Crystals for X-ray crystal structure determination were obtained by cooling a saturated toluene solution of the compound.
Spectroscopic data: 1H NMR (400.2 MHz, C6D6, 298 K): 0.93 (br. s, 6H, CH(CH3)2, NHC), 1.11 (br. s, 6H, CH(CH3)2, NHC), 1.13 (d, 6H, 3JHH = 6.9 Hz, CH(CH3)2, Dipp), 1.22 (d, 6H, 3JHH = 6.9 Hz, CH(CH3)2, Dipp), 1.32 (d, 6H, 3JHH = 6.8 Hz, CH(CH3)2, Dipp), 1.56 (s, 6H, C4/C5-CH3), 1.58 (d, 6H, 3JHH = 6.8 Hz, CH(CH3)2, Dipp), 3.46 (sept, 2H, 3JHH = 6.8 Hz, CH(CH3)2, Dipp), 3.61 (sept, 2H, 3JHH = 6.9 Hz, CH(CH3)2, Dipp), 5.63 (s, 2H, CH(CH3)2, NHC), 6.31 (s, 2H, C4/C5-H), 7.09-7.13 (m, 2H, p-Ph), 7.23-7.24 (m, 4H, m-Ph) ppm. 11B{1H} NMR (128.4 MHz, C6D6, 298 K): 34.9 ppm (B-Ge). 13C{1H} NMR (100.6 MHz, C6D6, 298 K): 10.32 (C4/C5-CH3), 21.2 and 22.3 (CH(CH3)2, NHC), 23.7, 24.7, 26.5 and 27.0 (CH(CH3)2, Dipp), 29.0 and 29.1 (CH(CH3)2, Dipp), 53.2 (CH(CH3)2, NHC), 122.6 (C4/C5-C, Dipp), 123.8 (p-Ph), 124.0 (m-Ph), 126.4 (C4/C5-C, NHC), 127.7 (m-Ph), 141.8 (o-Ph), 146.7 and 147.0 (i-Ph), 172.7 (CNHC).
Anal. Calcd. for C37H56BClGeN4 (675.73 g/mol): C 65.76, H 8.35, N 8.29; found C 65.66, H 8.43, N 8.18.
Supplementary Figure 1. 1H NMR spectrum of [(IPr2Me2)GeCl{B(DippNCH)2}] (1) in C6D6.
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(IPr2Me2){(HCDippN)2B}GeGe{B(NDippCH)2} (2) A mixture of 1 (0.203 g, 0.30 mmol) and [{HC(MeCMesN)2}Mg]2 (0.107 g, 0.15 mmol) was dissolved in toluene (5 mL) at room temperature. The color of the reaction mixture started to change to deep red. After stirring for 30 min, the reaction mixture was filtered into a Schlenk containing BPh3 (0.038 g, 0.15 mmol) to sequester the liberated carbene. After stirring for 30 min, the reaction mixture was evaporated to dryness and was extracted with pre-cooled (-30 ̊C) pentane. After concentration, the filtrate was stored at -35 ̊C for ca. 2 days. The obtained deep red crystalline compound was isolated, washed with small amount of cold pentane and dried in vacuo. Yield: 0.080 g (0.727 mmol, 49%). Crystals for X-ray crystal structure determination were obtained from a saturated solution in hexane at 4 ̊C.
Spectroscopic data: 1H NMR (400.2 MHz, C6D6, 298 K): 0.73 (d, 6H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 0.79 (d, 6H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 1.13-1.14 (br. m, 24H, CH(CH3)2, Dipp), 1.21 (d, 12H, 3JHH = 6.9 Hz, CH(CH3)2, Dipp), 1.24 (d, 12H, 3JHH = 6.9 Hz, CH(CH3)2, Dipp), 1.55 (s, 6H, C4/C5-CH3), 3.23 (sept, 4H, 3JHH = 6.8 Hz, CH(CH3)2, Dipp), 3.35 (sept, 4H, 3JHH = 6.9 Hz, CH(CH3)2, Dipp), 5.56 (s, 2H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 6.21 (s, 2H, C4/C5-H), 6.36 (s, 2H, C4/C5-H), 7.10 (d, 4H, 3JHH = 7.6 Hz, m-Ph), 7.14 (d, 4H, 3JHH = 7.0 Hz, m-Ph), 7.18-7.23 (m, 4H, p-Ph) ppm. 11B{1H} NMR (128.4 MHz, C6D6, 298 K): 33.6 and 41.5 ppm (B-Ge). 13C{1H} NMR (100.6 MHz, C6D6, 298 K): 10.3 (C4/C5-CH3), 20.2 and 21.2 (CH(CH3)2, NHC), 24.1, 24.5, 26.3 and 26.6 (CH(CH3)2, Dipp), 28.7 and 29.0 (CH(CH3)2, Dipp), 53.4 (CH(CH3)2, NHC), 122.0 and 122.3 (C4/C5-C, Dipp), 123.7 and 123.9 (m-Ph), 126.3 (C4/C5-C, NHC), 127.0 and 127.4 (p-Ph), 142.1 and 142.9 (o-Ph), 146.8 and 147.0 (i-Ph), 171.8 (CNHC).
UV-vis (toluene): λmax, nm (ϵ, L mol-1 cm-1): 434 (22200), 359 (25100).
Anal. Calcd. for C63H92B2Ge2N6 (1100.35 g/mol): C 68.77, H 8.43, N 7.64; found C 68.49, H 8.28, N 7.73.
Supplementary Figure 2. 1H NMR spectrum of (IPr2Me2){(HCDippN)2B}GeGe{B(NDippCH)2} (2) in C6D6.
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K2[{(HCDippN)2B}GeGe{B(NDippCH)2}] (3) A mixture of 1 (0.303 g, 0.45 mmol) and excess KC8 (0.306 g, 2.25 mmol) was dissolved/suspended in toluene (5 mL) at room temperature. The reaction mixture was sonicated for 2 h with occasional manual stirring, resulting in a brown colored solution. The reaction mixture was then filtered into an ampoule equipped with a J Young’s valve. The filtrate was concentrated and layered with hexane (3 mL). Storing at 4 ̊C overnight gave a dark brown crystals suitable for X-ray crystallography, which were isolated, washed with small amount of cold hexane and dried in vacuo. Yield: 0.130 g (0.13 mmol, 58%).
Spectroscopic data: 1H NMR (400.2 MHz, C6D6, 298 K): 1.28 (d, 24H, 3JHH = 6.8 Hz, CH(CH3)2), 1.37 (d, 24H, 3JHH = 6.9 Hz, CH(CH3)2), 4.11 (sept, 8H, 3JHH = 6.8 Hz, CH(CH3)2), 6.62 (s, 4H, C4/C5-H), 6.74-6.78 (m, 4H, p-Ph), 6.82 (d, 8H, 3JHH = 6.9 Hz, m-Ph) ppm. 11B{1H} NMR (128.4 MHz, C6D6, 298 K): 55.3 ppm (B-Ge). 13C{1H} NMR (100.6 MHz, C6D6, 298 K): 25.0, 25.7 (CH(CH3)2), 29.0 (CH(CH3)2), 120.9 (C4/C5-C), 123.2 (m-Ph), 125.5 (p-Ph), 146.8 (o-Ph), 150.4 (i-Ph).
UV-vis (toluene), λmax, nm (ϵ, L mol-1 cm-1): 428 (20100).
Anal. Calcd. for C52H72B2Ge2K2N4 (998.25 g/mol): C 62.57, H 7.27, N 5.61; found C 62.33, H 7.32, N 5.58.
Supplementary Figure 3. 1H NMR spectrum of K2[{(HCDippN)2B}GeGe{B(NDippCH)2}] (3) in C6D6.
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Reaction of 2 with H2: synthesis of (IPr2Me2){(HCDippN)2B}GeGe(H)2{B(NDippCH)2} (4)
Supplementary Figure 4. Generation of 4 via the reaction of 2 with dihydrogen
A solution of 2 (0.040 g, 0.036 mmol) in hexane (10 mL) was degassed by the freeze-pump-thaw method (3 times) and treated with H2 (1 atm) at room temperature. The reaction mixture was then either heated at 45 ̊C for 75 min or stirred at 25 ̊C for 36 h. By this time, the color of the reaction mixture changed from dark red to yellow. The reaction mixture was then filtered and concentrated to incipient crystallization. After standing overnight at 25 ̊C, the crystalline product were isolated, washed with small amount of hexane and dried in vacuo. Yield: 0.030 g (0.272 mmol, 75%). Crystals for X-ray crystal structure determination were obtained from a saturated solution in hexane at 25 ̊C.
Spectroscopic data: 1H NMR (400.2 MHz, C6D6, 298 K): 0.43 (br. s, 3H, CH(CH3)2, NHC), 0.45 (d, 3H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 0.53 (br. d, 3H, 3JHH = 5.9 Hz, CH(CH3)2, Dipp), 0.75 (br. d, 3H, 3JHH = 5.9 Hz, CH(CH3)2, Dipp), 0.83 (br. s, 6H, CH(CH3)2, Dipp), 1.06 (d, 3H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 1.26 (d, 3H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 1.09 (br. s, 3H, CH(CH3)2, Dipp), 1.17-1.24 (m, 21H, Dipp), 1.26 (d, 3H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 1.34 (s, 1H, Ge-H), 1.49 (br. d, 3H, 3JHH = 5.9 Hz, CH(CH3)2, Dipp), 1.54 (s, 3H, C4/C5-CH3), 1.56 (d, 6H, 3JHH = 5.9 Hz, CH(CH3)2, Dipp), 1.60 (br. s, 3H, CH(CH3)2, Dipp), 1.66 (s, 3H, C4/C5-CH3), 2.42 (s, 1H, Ge-H), 2.82 (br. m, 1H, CH(CH3)2, Dipp), 2.89 (sept, 2H, 3JHH = 6.9 Hz, CH(CH3)2, Dipp), 3.08 (br. m, 1H, CH(CH3)2, Dipp), 3.57 (sept, 4H, 3JHH = 6.9 Hz, CH(CH3)2, Dipp), 5.85 (sept, 1H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 6.12 (s, 3H, C4/C5-H), 6.26 (s, 3H, C4/C5-H), 6.36 (sept, 1H, 3JHH = 7.1 Hz, CH(CH3)2, NHC), 6.91 (d, 1H, 3JHH = 6.7 Hz, CH(CH3)2, m-H), 7.06-7.14 (m, 4H, m/p-Ph), 7.18-7.28 (m, 7H, m/p-Ph) ppm. 11B{1H} NMR (128.4 MHz, C6D6, 298 K): 31.4-34.6 ppm (br. B-Ge). 13C{1H} NMR (125.7 MHz, C6D6, 298 K): 10.27 and 10.35 (C4/C5-CH3), 20.3, 20.8, 21.9 and 22.4 (CH(CH3)2, NHC), 23.2, 23.4, 23.7, 24.2, 24.4, 24.5, 25.8, 26.3, 26.5, 26.7, and 27.3 (CH(CH3)2, Dipp), 28.2, 28.5, 28.8, 28.9 and 29.4 (CH(CH3)2, Dipp), 53.0 and 54.5 (CH(CH3)2, NHC), 121.8 and 122.1 (C4/C5-C, Dipp), 122.6, 122.7, 123.2, 123.6, 123.8, 124.5, and 124.7 (m/p-Ph), 126.0 and 126.5 (C4/C5-C, NHC), 127.3, 127.5, 127.6 (m/p-Ph), 141.9, 142.3, 143.2, 145.3, 146.1, 146.5, 146.8, 148.8, 149.1 (o/i-Ph), 173.5 (CNHC).
Anal. Calcd. for C63H94B2Ge2N6 (1102.24 g/mol): C 68.64, H 8.60, N 7.63; found C 68.58, H 8.51, N 7.63.
H2 (1 atm.)
NNiPr
iPrGe Ge
B
B N
N
N
NDipp
Dipp
Dipp
Dipp
2
NNiPr
iPrGe Ge
B
B N
N
N
NDipp
Dipp
Dipp
Dipp
4
HH
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Supplementary Figure 5. 1H NMR spectrum of (IPr2Me2){(HCDippN)2B}GeGe(H)2{B(NDippCH)2} (4) in C6D6 (*).
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{(HCDippN)2B}2GeGe (5) A mixture of 3 (0.150 g, 0.15 mmol) and [Ph3C][B(C6F5)4] (0.278 g, 0.30 mmol) was dissolved/suspended in benzene (6 mL) was added at room temperature. After sonicating for 5 min, the reaction mixture was stirred at 25 ̊C for 1 h, resulting in a yellow-brown solution. The reaction mixture was then evaporated to dryness and the remaining solid extracted with pre-cooled (-45 ̊C) pentane. Removal of all volatiles from the filtrate gave brownish yellow solid. Yield: 0.092 g (0.10 mmol, 67%). Crystals for X-ray crystal structure determination were obtained from a saturated solution in pentane at 4 ̊C.
Alternate synthesis: A mixture of 3 (0.01 g, 0.01 mmol) and [Cp2Fe][BArf4] (0.021 g, 0.02
mmol) was dissolved/suspended in C6D6 (0.5 mL) in a Young’s valve NMR tube at room temperature. After sonicating for ca. 10 min, all the solid dissolved to give a yellow solution. 1H NMR analysis showed quantitative conversion to 5 and ferrocene in 1:2 ratio.
Spectroscopic data: 1H NMR (500 MHz, C6D6, 298 K): 1.13 (d, 24H, 3JHH = 6.9 Hz, CH(CH3)2), 1.29 (d, 24H, 3JHH = 6.9 Hz, CH(CH3)2), 3.22 (sept, 8H, 3JHH = 6.9 Hz, CH(CH3)2), 6.19 (s, 4H, C4/C5-H), 7.03-7.06 (m, 4H, p-Ph), 7.08-7.10 (m, 8H, m-Ph) ppm. 11B{1H} NMR (128.4 MHz, C6D6, 298 K): 38.3 ppm (B-Ge). 13C{1H} NMR (100.6 MHz, C6D6, 298 K): 24.8, 25.5 (CH(CH3)2), 29.3 (CH(CH3)2), 123.3 (C4/C5-C), 126.0 (m-Ph), 128.6 (p-Ph), 140.37 (o-Ph), 146.4 (i-Ph).
UV-vis (toluene), λmax, nm (ϵ, L mol-1 cm-1): 460 (21850), 377 (16400).
Anal. Calcd. for C52H72B2Ge2N4 (920.06 g/mol): C 67.89, H 7.89, N 6.09; found C 67.02, H 7.65, N 5.92.
Supplementary Figure 6. 1H NMR spectrum of {(HCDippN)2B}2GeGe (5) in C6D6.
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Supplementary Figure 7. 1H NMR spectrum of {(HCDippN)2B}2GeGe (5) and [Cp2Fe] in 1:2 ratio in C6D6.
Supplementary Figure 8. Variable temperature 1H NMR spectra of {(HCDippN)2B}2GeGe (5) in toluene-d8 in the temperature range 183 – 298 K
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Reaction of 5 with H2: synthesis of {(HCDippN)2B}(H)2GeGe(H)2{B(NDippCH)2} (6)
Supplementary Figure 9. Generation of 6 via the reaction of 5 with dihydrogen
A solution of 5 (0.045 g, 0.049 mmol) in pentane (3 mL) was degassed by the freeze-pump-thaw method (3 times) and treated with H2 (4 atm). The reaction mixture was then heated at 45 ̊C for 6 h. By this time, the color changed to pale yellow, and the reaction mixture was then filtered and concentrated. Upon storing at -35 ̊C, a pale yellow crystalline solid started to precipitate. After standing for ca. 2 d, the crystals were isolated and dried in vacuo. Yield: 0.025 g (0.027 mmol, 55%). Crystals for X-ray crystal structure determination were obtained from a saturated solution in pentane at 4 ̊C.
Spectroscopic data: 1H NMR (500 MHz, C6D6, 298 K): 1.14 (d, 24H, 3JHH = 6.9 Hz, CH(CH3)2), 1.19 (d, 24H, 3JHH = 6.9 Hz, CH(CH3)2), 2.22 (s, 4H, Ge-H), 3.07 (sept, 8H, 3JHH = 6.9 Hz, CH(CH3)2), 6.26 (s, 4H, C4/C5-H), 7.09 (d, 3JH-H = 7.8 Hz, 8H, m-Ph), 7.18 (t, 3JH-H = 7.8 Hz, 4H, p-Ph) ppm. 11B{1H} NMR (160.4 MHz, C6D6, 298 K): 27.3 ppm (B-GeH2) 13C{1H} NMR (125 MHz, C6D6, 298 K): 24.1, 25.7 (CH(CH3)2), 29.0 (CH(CH3)2), 122.1 (C4/C5-C), 123.9 (m-Ph), 128.7 (p-Ph), 139.9 (p-Ph), 146.3 (i-Ph).
Anal. Calcd. for C52H76B2Ge2N4 (923.96 g/mol): C 67.59, H 8.29, N 6.07; found C 67.32, H 7.96, N 5.59.
Supplementary Figure 10. 1H NMR spectrum of {(HCDippN)2B}(H)2GeGe(H)2{B(NDippCH)2} (6) in C6D6.
Ge GeB
B N
N
N
NDipp
Dipp
Dipp
Dipp
6
H2 (4 atm.)
5
Ge Ge
N BN
Dipp
NN
BDipp
iPr
iPr
iPr
iPrH
H
HH
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NMR tube experiments Reaction of 5 with IPr2Me2: generation of (IPr2Me2){(HCDippN)2B}GeGe{B(NDippCH)2} (2) To a yellow solution of 5 in C6D6 (0.5 mL) generated in situ from 3 (0.010 g, 0.01 mmol) and [Cp2Fe][BArf
4] (0.021 g, 0.02 mmol), was added the solid IPr2Me2 (2.0 mg, 0.011 mmol) in a J Young’s NMR tube inside a glove box. Immediately, the color of the reaction mixture changed to deep red. 1H NMR monitoring of the reaction mixture showed quantitative conversion to 2 (Fig. S11, upper).
Reaction of 5 with KC8: regeneration of K2[{(HCDippN)2B}GeGe{B(NDippCH)2}] (3) To a yellow solution of 5 in C6D6 (0.5 mL) generated in situ from 3 (0.010 g, 0.01 mmol) and [Cp2Fe][BArf
4] (0.021 g, 0.02 mmol)) was added solid KC8 (6.0 mg, 0.044 mmol, excess) in a J Young’s NMR tube inside a glove box. The color of the reaction mixture started to change to dark brown. After sonication for ca. 5 mins, 1H NMR monitoring of the reaction mixture showed quantitative conversion to 3 (Fig. S11, lower).
Supplementary Figure 11. 1H NMR monitoring of the reactions of 5 with IPr2Me2 and KC8 in C6D6. (upper) Reaction of 5 with 1 equiv. of IPr2Me2; (center) spectrum of in situ generated 5 and ferrocene in a 1:2 ratio; and (lower) reaction of 5 with KC8. $ denotes ferrocene.
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Cyclic voltammograms
Supplementary Figure 12. Cyclic voltammogram of 2 (left) and 5 (right) in a 0.1 M solution of tetrabutylammonium hexafluorophosphate in THF, referenced to a silver quasi-reference electrode and scanned at 0.5 V s-1.
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UV-visible spectra
Supplementary Figure 13. UV-vis spectra of toluene solutions of compounds containing Ge=Ge double bonds: 2 (0.34 mM, upper left), 3 (0.5 mM, upper right) and 5 (0.54 mM, lower).
The extinction coefficients associated with the features in these spectra are as follows: 2: = 359 nm, ε = 25100 mol-1 dm3 cm-1; = 434 nm ε = 22200 mol-1 dm3 cm-1; 3: = 428 nm, ε = 20100 mol-1 dm3 cm-1; 5: = 377 nm, ε = 16400 mol-1 dm3 cm-1; = 460 nm ε = 21850 mol-1 dm3 cm-1; = 515 nm, ε = 2300 mol-1 dm3 cm-1.
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3. X-ray crystallographic studies Crystals of compounds 1-6, suitable for X-ray structural determinations were mounted on MiTeGen MicroMounts using perfluoropolyether oil and cooled rapidly in a stream of cold N2 using an Oxford Cryosystems Cryostream unit. Crystallographic measurements were performed on an Enraf-Nonius Kappa CCD diffractometer using Mo-Κα radiation (2, 4, 5 and 6) or on an Oxford Diffraction SuperNova machine operating at using Cu-Κα radiation (1 and 3). All structures were solved by direct methods using SHELXT and refined against F2 on all data by full-matrix least squares with SHELXL-2014 (Refs. 7-9). All non-hydrogen atoms were refined anisotropically. Hydrogen atoms were placed in ideal positions and refined using a riding model, except for those directly bound to germanium atoms that were located in the Fourier difference electron density map. Complete details of the X-ray analyses reported herein have been deposited at The Cambridge Crystallographic Data Centre (CCDC 1447808-1447813); key details are given in Supplementary Table 1.
Additional details for 2: An extreme case of whole molecule disorder was found in the crystal structure of 2. Of the twelve molecules of the germanium dimer per unit cell, four appeared fully disordered over at least two main positions and lying over the c glide plane. Modeling this disorder proved to be extremely difficult and the refinement recurrently became unstable. Given the fact that the same unit cell contains other eight well-behaved molecules of 2, we took the decision of treating the heavily disordered component as a diffuse contribution to the overall scattering without specific atom positions by using the SQUEEZE/PLATON routine9.
Additional details for 3.½(C7H8): The central Ge2 core, as well as the bonded NHC ligands, were found to be disordered over an inversion center and have been modelled using PART -1/-2 cards. In order to obtained reasonable anisotropic displacement parameters SIMU/DELU instructions were employed.
Alert level A
PLAT910_ALERT_3_A Missing # of FCF Reflection(s) Below Th(Min) ... 58 Report Author Response: To avoid other particular problems related to the X-Ray instrument employed the theta minimum value is set up to 4.0. This is the reason for the missing reflections at low angle. However this does not present a problem due to the high number of independent reflections (7933) collected and the high data/parameter ratio (ca. 22).
Additional details for 4: A small contribution (ca. 8%) of a second component of the main molecule was observed, but only the heavier Ge centres could be modelled, being their anisotropic displacement parameters constrained to be identical to those of the main component by using EADP.
Alert level B
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PLAT987_ALERT_1_B The Flack x is >> 0 - Do a BASF/TWIN Refinement Please Check Author Response: The structure was refined as an inversion twin and the refinement converged for a volume fraction of 0.45, in good agreement with the (unrefined, calculated only) conventional Flack parameter (0.0449(16)), thus confirming the presence of two-component inversion twin close to racemic twining.
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Supplementary Table 1: Crystallographic details for compounds 1-6.
1 2 3.½(C7H8): 4 5 6
Molecular formula C37H56BClGeN4 C63H92B2Ge2N6 C33H44BGeKN2 C63H94B2Ge2N6 C52H72B2Ge2N4 C52H76B2Ge2N4
Mr 675.73 1100.22 591.20 1102.24 919.93 923.96
Crystal system monoclinic monoclinic monoclinic orthorhombic monoclinic monoclinic
Space group C2/c C2/c C2/c P 212121 P21/n P21/n
Unit cell dimensions
(Å/o)
a = 31.5447(4)
b = 15.1571(2)
c = 16.3260(3)
β = 102.9399(7)
a = 51.3040(2)
b = 13.7692(6)
c = 27.1756(5)
β = 101.731(3)
a = 26.718(5)
b = 18.519(4)
c = 14.938(3)
β = 108.53(3)
a = 16.8587(2)
b = 19.0488(2)
c = 19.5197(2)
a = 22.4542(7)
b = 10.5244(3)
c = 23.6510(8)
β = 112.271(4)
a = 13.6923(3)
b = 12.3401(2)
c = 15.7584(4)
β = 97.648(2)
Cell volume (Å3) 7607.7(2) 18796.2(12) 7008.00(3) 6268.52(12) 5172.2(3) 2638.92(10)
Z 8 8 8 4 4 2
ρc (mg m-3) 1.180 0.778 1.121 1.168 1.181 1.163
T (K) 150 150 150 150 150 150
λ (Å) 0.71073 1.54180 0.71073 1.54180 1.54180 1.54180
Reflections (independent) 15997 (8603) 19571 (13324) 7933 (5286) 12415 (12190) 10189 (8365) 5226 (4605)
R(int) 0.027 0.074 0.040 0.024 0.039 0.030
R1 and wR2 [I > 2σ(I)] 0.0469, 0.1011 0.0793, 0.2115 0.0639, 0.1663 0.0290, 0.0975 0.0337, 0.0884 0.0299, 0.0826
R1 and wR2 [all reflns] 0.0631, 0.1164 0.1066, 0.2418 0.0985, 0.1797 0.0297, 0.0992 0.0442, 0.0979 0.0346, 0.0881
Residuals (e Å-3) 2.32, -0.82 0.77, -1.30 1.19, -1.60 0.42, -0.45 0.50, -0.35 0.27, -0.54
CCDC reference 1447808 1447809 1447810 1447811 1447812 1447813
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Supplementary Figure 14. Thermal ellipsoid (50%) drawing of 1 (hydrogen atoms are not shown and Dipp groups are drawn in wireframe format for clarity). Selected bond distances and angles are as follows: Ge(1)-B(5) 2.111(3) Å, Ge(1)-C(34) 2.084(2) Å, Ge(1)-Cl(2) 2.338(1) Å, Cl(2)-Ge(1)-B(5) 101.7(1)o, Cl(2)-Ge(1)-C(34) 94.8(1)o, B(5)-Ge(1)-C(34) 99.5(1)o.
Supplementary Figure 15. Thermal ellipsoid (50%) drawing of 2 (hydrogen atoms are not shown and boryl/carbene substituents are drawn in wireframe format for clarity). Selected bond distances and angles are as follows: Ge(1)-Ge(2) 2.279(1) Å, Ge(1)-B(1) 2.094(5), Ge(2)-B(2) 2.057(4) Å, Ge(2)-C(53) 2.003(5) Å, B(1)-Ge(1)-Ge(2) 111.6(1)o, B(2)-Ge(2)-Ge(1) 118.6(1)o.
B5
Ge1
Cl2
C34
C53
B2
B1
Ge1
Ge2
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Supplementary Figure 16. Thermal ellipsoid (50%) drawing of 4 (most hydrogen atoms are not shown and boryl/carbene substituents are drawn in wireframe format for clarity). Selected bond distances and angles are as follows: Ge(1)-Ge(2) 2.454(1) Å, Ge(1)-B(1) 2.106(3), Ge(2)-B(2) 2.058(3) Å, Ge(2)-C(53) 2.069(3) Å, B(1)-Ge(1)-Ge(2) 104.5(1)o, B(2)-Ge(2)-Ge(1) 115.1(1)o.
Supplementary Figure 17. Thermal ellipsoid (50%) drawing of 6 (most hydrogen atoms are not shown and Dipp substituents are drawn in wireframe format for clarity). Selected bond distances and angles are as follows: Ge(1)-Ge(2) 2.411(1) Å, Ge(1)-B(1) 2.042(2), B(1)-Ge(1)-Ge(1') 114.2(1)o.
Ge1 Ge2
H1B H2B B1
B2 C53
Ge1
Ge1’ H1B
H2B
H1B’ H2B’
B1
B1’
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19
4. Computational details DFT calculations were performed using the Amsterdam Density Functional (ADF) 2013 software package. Calculations were performed using the Vosko-Wilk-Nusair local density approximation with exchange from Becke10, and correlation corrections from Perdew11, and 3-dimension dispersion effect (BP86-D3). Slater-type orbitals (STOs)12 were used for the triple zeta basis set with an additional set of polarization functions (TZP). The large frozen core basis set approximation was applied with no molecular symmetry. General numerical quality was good. Run files for the geometry calculations are given below and complete output files will be provided upon request.
Supplementary Figure 18. DFT Optimized structures of {(HCDippN)2B}2GeGe (5) (left) and the hypothetical 1,2 isomer {(HCDippN)2B}GeGe{B(DippNCH)2} (right) along with the corresponding DFT calculated energies.
#! /bin/sh
# ==============================
# {(HCDippN)2B}2GeGe (5) # ==============================
"$ADFBIN/adf" <<eor
ATOMS
1 Ge 1.141065347000 6.497645877000 11.939525040000 R=2.033
2 Ge 0.726001415600 6.547099166000 14.297782670000 R=2.033
3 N 3.999626507000 7.048913268000 12.818026250000 R=1.608
4 N 4.191601247000 6.391020471000 10.632966320000 R=1.608
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5 N -1.852720532000 5.986576639000 11.807987290000 R=1.608
6 N -1.277095067000 6.550068403000 9.664329500000 R=1.608
7 B 3.195423485000 6.659820788000 11.659939340000 R=1.792
8 B -0.695917206900 6.327304308000 10.980319130000 R=1.792
9 C 5.356068425000 7.006112924000 12.468177580000 R=1.700
10 C 3.803142134000 3.503766127000 10.277946300000 R=1.700
11 C 5.469239873000 6.611631220000 11.174283390000 R=1.700
12 C -2.678979740000 2.494974468000 12.300251970000 R=1.700
13 C 3.630816716000 7.358252908000 14.171049180000 R=1.700
14 C 3.319831278000 8.701931040000 14.521640040000 R=1.700
15 C 3.135196458000 9.007580549000 15.875992510000 R=1.700
16 C 5.012608476000 2.550724016000 10.344180080000 R=1.700
17 C 3.244689330000 8.025695423000 16.862622050000 R=1.700
18 C -0.120584008600 6.600929497000 6.116692616000 R=1.700
19 C 3.523113240000 6.710462827000 16.507862570000 R=1.700
20 C -0.761484370800 9.421303187000 9.348913704000 R=1.700
21 C 3.718458296000 6.341252519000 15.163802570000 R=1.700
22 C 3.274493179000 9.804171752000 13.471882300000 R=1.700
23 C 0.135615726600 7.958479688000 5.934498129000 R=1.700
24 C 2.102103281000 10.775520790000 13.676535090000 R=1.700
25 C 2.482481040000 2.716847591000 10.230881390000 R=1.700
26 C -2.639502903000 8.201024222000 13.570354510000 R=1.700
27 C -1.913419168000 10.369118320000 8.961277661000 R=1.700
28 C 4.615806876000 10.565661520000 13.427307430000 R=1.700
29 C -2.023598802000 9.283800894000 14.472001220000 R=1.700
30 C -3.006573431000 6.008179660000 11.012661230000 R=1.700
31 C -0.053287174840 8.846911766000 6.991310285000 R=1.700
32 C 4.133537211000 4.912426231000 14.828170550000 R=1.700
33 C -2.665122430000 6.347436619000 9.743404342000 R=1.700
34 C 5.609612032000 4.672061042000 15.209160180000 R=1.700
35 C 0.503457162900 10.212936110000 9.721731787000 R=1.700
36 C -1.972433644000 5.732001552000 13.216236430000 R=1.700
37 C -1.815531793000 4.403453950000 13.701384220000 R=1.700
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38 C 3.234444554000 3.858123838000 15.495200350000 R=1.700
39 C -2.108792098000 4.150993099000 15.047647190000 R=1.700
40 C -0.496182483300 8.403174727000 8.245985239000 R=1.700
41 C -2.536807886000 5.170242737000 15.900125260000 R=1.700
42 C 4.107173673000 5.866767607000 9.295504005000 R=1.700
43 C 4.318207564000 6.736699747000 8.199005573000 R=1.700
44 C 4.322036852000 6.186060822000 6.909413566000 R=1.700
45 C -4.153159457000 8.449603286000 13.399713040000 R=1.700
46 C 4.135956263000 4.820198337000 6.706215217000 R=1.700
47 C -2.660959295000 6.470578934000 15.423578790000 R=1.700
48 C 3.946048393000 3.976701051000 7.799028243000 R=1.700
49 C -0.897867292000 4.622699797000 7.491920123000 R=1.700
50 C 3.934970475000 4.474656637000 9.110384678000 R=1.700
51 C 4.591023994000 8.225295955000 8.384970463000 R=1.700
52 C -2.381605081000 6.786939086000 14.080833870000 R=1.700
53 C 3.697922996000 9.103721265000 7.493451121000 R=1.700
54 C -1.425868978000 3.261525329000 12.772620600000 R=1.700
55 C 0.241805726400 3.712821242000 7.005017530000 R=1.700
56 C -0.403835250200 2.302839260000 13.402614980000 R=1.700
57 C 6.078036939000 8.551006576000 8.133636215000 R=1.700
58 C -2.207419214000 4.278693867000 6.752641312000 R=1.700
59 C -0.734350659900 7.018967812000 8.416784410000 R=1.700
60 C -0.563987617200 6.103737110000 7.350623250000 R=1.700
61 H 6.138877553000 7.265877338000 13.172609940000 R=1.350
62 H 3.796581510000 4.098254186000 11.201668540000 R=1.350
63 H 6.366822644000 6.458173210000 10.585219670000 R=1.350
64 H -2.395715161000 1.693576082000 11.601929550000 R=1.350
65 H -3.385806662000 3.160077755000 11.785970810000 R=1.350
66 H -3.200744674000 2.034608572000 13.152898220000 R=1.350
67 H 2.910800239000 10.034686420000 16.166566610000 R=1.350
68 H 5.956376461000 3.108565579000 10.420478010000 R=1.350
69 H 5.068793227000 1.913075353000 9.449131908000 R=1.350
70 H 4.932800120000 1.891445586000 11.221183170000 R=1.350
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71 H 3.106164937000 8.290230255000 17.912444070000 R=1.350
72 H 0.020157920000 5.912333411000 5.281793975000 R=1.350
73 H 3.602444198000 5.949400577000 17.285387990000 R=1.350
74 H -1.074501744000 8.864760602000 10.242821970000 R=1.350
75 H 3.132987869000 9.314419892000 12.498145220000 R=1.350
76 H 0.477552418200 8.325807426000 4.965121689000 R=1.350
77 H 2.206447093000 11.360616480000 14.602193250000 R=1.350
78 H 1.147229331000 10.234086490000 13.714089850000 R=1.350
79 H 2.059618792000 11.489677730000 12.841809480000 R=1.350
80 H 1.619532110000 3.396461956000 10.247685480000 R=1.350
81 H 2.406899538000 2.049821490000 11.101783240000 R=1.350
82 H 2.413573675000 2.095851789000 9.325417567000 R=1.350
83 H -2.169004687000 8.280081808000 12.580065210000 R=1.350
84 H -2.130979887000 11.064465910000 9.785418051000 R=1.350
85 H -2.831520178000 9.809198587000 8.734940143000 R=1.350
86 H -1.656885533000 10.968988710000 8.075157398000 R=1.350
87 H 5.454289342000 9.889269703000 13.213161280000 R=1.350
88 H 4.814904623000 11.063948000000 14.388188870000 R=1.350
89 H 4.591340362000 11.336752830000 12.643066620000 R=1.350
90 H -0.948699682900 9.108009759000 14.620176920000 R=1.350
91 H -2.504966735000 9.316141143000 15.460645140000 R=1.350
92 H -2.154428331000 10.273343660000 14.010808280000 R=1.350
93 H -3.986052410000 5.774825688000 11.415977990000 R=1.350
94 H 0.132524625900 9.911639413000 6.836561266000 R=1.350
95 H 4.040855739000 4.793613870000 13.739422240000 R=1.350
96 H -3.304867321000 6.471963851000 8.876518877000 R=1.350
97 H 6.280160161000 5.373981883000 14.696217910000 R=1.350
98 H 5.912067366000 3.650823822000 14.934861240000 R=1.350
99 H 5.756996162000 4.789629643000 16.293266020000 R=1.350
100 H 1.303066098000 9.539393667000 10.059012780000 R=1.350
101 H 0.284321443900 10.916324870000 10.538004340000 R=1.350
102 H 0.881978187600 10.795665380000 8.868894531000 R=1.350
103 H 3.516430235000 2.852911257000 15.150197240000 R=1.350
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104 H 2.177662399000 4.029089784000 15.244981470000 R=1.350
105 H 3.333139636000 3.869699314000 16.590752410000 R=1.350
106 H -2.009728894000 3.136248617000 15.435252910000 R=1.350
107 H -2.768729547000 4.946873491000 16.943018280000 R=1.350
108 H 4.479988644000 6.839100145000 6.049418475000 R=1.350
109 H -4.330663829000 9.459822622000 13.002572650000 R=1.350
110 H -4.672957812000 8.369189371000 14.366248900000 R=1.350
111 H -4.607230493000 7.728497636000 12.707486260000 R=1.350
112 H 4.145461979000 4.411208570000 5.694128255000 R=1.350
113 H -2.991684758000 7.261042047000 16.098650360000 R=1.350
114 H 3.819626471000 2.904854429000 7.633826283000 R=1.350
115 H -1.053383518000 4.423167843000 8.561434921000 R=1.350
116 H 4.365735331000 8.470686728000 9.432326059000 R=1.350
117 H 3.860135486000 10.165842870000 7.729216445000 R=1.350
118 H 2.635149014000 8.874445354000 7.639073451000 R=1.350
119 H 3.929621086000 8.964786575000 6.426946403000 R=1.350
120 H -0.954722454600 3.713281152000 11.888314910000 R=1.350
121 H 1.188811910000 3.953400405000 7.503561799000 R=1.350
122 H 0.399020202800 3.806524161000 5.920176453000 R=1.350
123 H -0.002440889892 2.660432386000 7.211933283000 R=1.350
124 H -0.084979365570 1.557550406000 12.660026090000 R=1.350
125 H -0.824502956700 1.752954722000 14.257397630000 R=1.350
126 H 0.485559494700 2.848968198000 13.744815260000 R=1.350
127 H 6.739235028000 7.975580722000 8.795422729000 R=1.350
128 H 6.270715711000 9.620285255000 8.306549421000 R=1.350
129 H 6.357652001000 8.320556152000 7.094422307000 R=1.350
130 H -2.105677271000 4.462349965000 5.672292819000 R=1.350
131 H -3.051436407000 4.879138754000 7.117871628000 R=1.350
132 H -2.459600444000 3.217026916000 6.892776543000 R=1.350
END
GUIBONDS
1 1 7 1.0 2 1 8 1.0 3 1 2 2.0
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4 3 9 1.0
5 3 13 1.0
6 3 7 1.0
7 4 11 1.0
8 4 7 1.0
9 4 42 1.0
10 5 30 1.0
11 5 36 1.0
12 5 8 1.0
13 6 33 1.0
14 6 8 1.0
15 6 59 1.0
16 54 12 1.0
17 9 11 2.0
18 54 56 1.0
19 13 14 1.5
20 13 21 1.5
21 14 15 1.5
22 14 22 1.0
23 59 40 1.5
24 15 17 1.5
25 10 25 1.0
26 17 19 1.5
27 10 16 1.0
28 19 21 1.5
29 21 32 1.0
30 59 60 1.5
31 22 24 1.0
32 22 28 1.0
33 49 55 1.0
34 60 18 1.5
35 60 49 1.0
36 26 45 1.0
37 18 23 1.5
38 26 29 1.0
39 30 33 2.0
40 32 38 1.0
41 32 34 1.0
42 36 52 1.5
43 36 37 1.5
44 49 58 1.0
45 23 31 1.5
46 37 39 1.5
47 37 54 1.0
48 42 43 1.5
49 42 50 1.5
50 43 44 1.5
51 43 51 1.0
52 39 41 1.5
53 44 46 1.5
54 20 27 1.0
55 46 48 1.5
56 41 47 1.5
57 48 50 1.5
58 50 10 1.0
59 31 40 1.5
60 51 57 1.0
61 51 53 1.0
62 40 20 1.0
63 47 52 1.5
64 52 26 1.0
65 20 35 1.0
66 132 58 1.0
67 131 58 1.0
68 61 9 1.0
69 62 10 1.0
70 63 11 1.0
71 64 12 1.0
72 65 12 1.0
73 66 12 1.0
74 67 15 1.0
75 68 16 1.0
76 69 16 1.0
77 70 16 1.0
78 71 17 1.0
79 72 18 1.0
80 73 19 1.0
81 74 20 1.0
82 75 22 1.0
83 76 23 1.0
84 77 24 1.0
85 78 24 1.0
86 79 24 1.0
87 80 25 1.0
88 81 25 1.0
89 82 25 1.0
90 83 26 1.0
91 84 27 1.0
92 85 27 1.0
93 86 27 1.0
94 87 28 1.0
95 88 28 1.0
96 89 28 1.0
97 90 29 1.0
98 91 29 1.0
99 92 29 1.0
100 93 30 1.0
101 94 31 1.0
102 95 32 1.0
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103 96 33 1.0
104 97 34 1.0
105 98 34 1.0
106 99 34 1.0
107 100 35 1.0
108 101 35 1.0
109 102 35 1.0
110 103 38 1.0
111 104 38 1.0
112 105 38 1.0
113 106 39 1.0
114 107 41 1.0
115 108 44 1.0
116 109 45 1.0
117 110 45 1.0
118 111 45 1.0
119 112 46 1.0
120 113 47 1.0
121 114 48 1.0
122 115 49 1.0
123 116 51 1.0
124 117 53 1.0
125 118 53 1.0
126 119 53 1.0
127 120 54 1.0
128 121 55 1.0
129 122 55 1.0
130 123 55 1.0
131 124 56 1.0
132 125 56 1.0
133 126 56 1.0
134 127 57 1.0
135 128 57 1.0
136 129 57 1.0
137 130 58 1.0
END
SOLVATION
Surf Esurf
Solvent name=Hexane cav0=0.0 cav1=0.0067639
Charged method=CONJ
C-Mat POT
SCF VAR ALL
CSMRSP
END
BASIS
type TZP
core Large
createoutput None
END
XC
GGA Becke88 Perdew86
DISPERSION Grimme3
END
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GEOMETRY
optim Delocalized
END
SAVE TAPE21 TAPE13
NumericalQuality Good
NOPRINT LOGFILE
eor
-----------------------------------------------------------------------
#! /bin/sh
# ==============================
# 1,2 isomer {(HCDippN)2B}GeGe{B(DippNCH)2}
# ==============================
"$ADFBIN/adf" <<eor
ATOMS
1 Ge 32.202635605788 7.318439982113 15.072774048693 R=2.033
2 Ge 31.021435273613 5.393927781049 15.539651929618 R=2.033
3 B 31.346792804558 3.639243340793 16.605417991118 R=1.792
4 N 30.580780950003 2.457133056752 16.924038120159 R=1.608
5 C 31.454353674338 1.509741126625 17.480654173288 R=1.700
6 C 32.714219208507 2.024622716457 17.531373693338 R=1.700
7 N 32.689316565202 3.329819872585 17.035332114334 R=1.608
8 C 33.860254182040 4.151603581567 16.903976097334 R=1.700
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9 C 34.076490938055 5.185569089528 17.844847987450 R=1.700
10 C 35.202533756263 5.998229726852 17.665166313872 R=1.700
11 C 36.078069696327 5.795282108264 16.594491736220 R=1.700
12 C 35.832266752677 4.781931780440 15.671572578476 R=1.700
13 C 34.710551094991 3.947030939180 15.801192167055 R=1.700
14 C 34.417818704248 2.884830371583 14.748986316758 R=1.700
15 C 34.180621416283 3.520961039552 13.368122940692 R=1.700
16 C 35.531695497187 1.824523191078 14.693950297476 R=1.700
17 C 33.094608976736 5.417477215944 18.988404161791 R=1.700
18 C 33.290170485226 4.394117483599 20.123134467564 R=1.700
19 C 33.135551480112 6.846008727596 19.538190043153 R=1.700
20 C 29.168597569882 2.200452898653 16.854971925545 R=1.700
21 C 28.559278474467 1.994712032078 15.596383882979 R=1.700
22 C 29.365191313730 2.092974478661 14.303458670434 R=1.700
23 C 30.349223751052 0.916289289088 14.146597588596 R=1.700
24 C 28.497739342879 2.213975365715 13.045249634493 R=1.700
25 C 27.189789007511 1.689440229271 15.580992597882 R=1.700
26 C 26.455892191445 1.590206000071 16.763557430683 R=1.700
27 C 27.075063460865 1.816624016428 17.993000478498 R=1.700
28 C 28.440058252667 2.129511512299 18.065464672666 R=1.700
29 C 29.113193237294 2.432050861215 19.403157182825 R=1.700
30 C 29.245096376028 3.953252224897 19.606742951615 R=1.700
31 C 28.420086872913 1.784154087848 20.609445726898 R=1.700
32 N 30.871391681588 10.171536730789 15.366792970146 R=1.608
33 C 32.047930550715 10.879233140064 14.961127236429 R=1.700
34 C 33.160181456713 10.927829628930 15.831486343824 R=1.700
35 C 33.120601558606 10.238116842486 17.194180453171 R=1.700
36 C 32.272046733249 11.032079676788 18.206207928867 R=1.700
37 C 34.509841706088 9.937737998985 17.768601016872 R=1.700
38 C 34.290282519456 11.639130580056 15.401279098376 R=1.700
39 C 34.315245201942 12.271490018774 14.156457886984 R=1.700
40 C 33.213934454134 12.187118210014 13.304303110444 R=1.700
41 C 32.062310075531 11.482269040443 13.683609078869 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 28
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
28
42 C 30.895149973807 11.292988685368 12.717949867273 R=1.700
43 C 31.065702790090 9.972039305102 11.940336846603 R=1.700
44 C 30.694015864953 12.469442159039 11.752271155074 R=1.700
45 B 30.651801983990 8.744552629671 15.391306178556 R=1.792
46 N 29.243168253907 8.619098252018 15.730493593257 R=1.608
47 C 28.452159280278 7.445198047816 15.932621414095 R=1.700
48 C 28.032309581490 7.111799145503 17.243321658809 R=1.700
49 C 27.241800378815 5.964769338855 17.401541387732 R=1.700
50 C 26.903177271785 5.162804524504 16.313184504612 R=1.700
51 C 27.331747929137 5.503635826968 15.031929495798 R=1.700
52 C 28.101519076662 6.655774763259 14.807363326976 R=1.700
53 C 28.492311330557 7.087341752883 13.398185516293 R=1.700
54 C 28.566338680662 5.927150487202 12.400942257645 R=1.700
55 C 27.550078481136 8.194259659266 12.886682082570 R=1.700
56 C 28.452118941929 7.958324362161 18.443125828782 R=1.700
57 C 29.912655630451 7.673755406918 18.838684120830 R=1.700
58 C 27.532401964277 7.797737630490 19.661943195290 R=1.700
59 C 28.699811800888 9.902829562902 15.877089352841 R=1.700
60 C 29.671409433405 10.830700001441 15.665776201604 R=1.700
61 H 31.105223212554 0.529548944580 17.786376853180 R=1.350
62 H 33.632846095194 1.557628979710 17.868031011569 R=1.350
63 H 35.393702012508 6.816628286806 18.358189205374 R=1.350
64 H 36.945867487619 6.444667777767 16.473067326531 R=1.350
65 H 36.507165298104 4.646563952100 14.824380523798 R=1.350
66 H 33.488304764901 2.374565636671 15.035989578222 R=1.350
67 H 35.085897543804 4.030173728611 13.003233338364 R=1.350
68 H 33.370848553909 4.264449990325 13.412851753869 R=1.350
69 H 33.906337638188 2.747982680152 12.634115262779 R=1.350
70 H 36.491404141463 2.272261604703 14.393691254113 R=1.350
71 H 35.281746858106 1.042067658780 13.961522926297 R=1.350
72 H 35.674143957635 1.347168123978 15.674620500991 R=1.350
73 H 32.086362663943 5.264887961750 18.573304422499 R=1.350
74 H 33.178213080061 3.364377072830 19.758549950150 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 29
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
29
75 H 32.542862505238 4.556897573200 20.915042237259 R=1.350
76 H 34.292015739125 4.498578534863 20.569050863074 R=1.350
77 H 34.093018911460 7.069614745307 20.032339855174 R=1.350
78 H 32.340770905743 6.981541823959 20.283740655409 R=1.350
79 H 32.976232508714 7.576971217115 18.734618043260 R=1.350
80 H 29.964523513320 3.016449031585 14.372963169365 R=1.350
81 H 30.928854043251 1.030479688926 13.218068972094 R=1.350
82 H 29.800003849123 -0.037049551407 14.093406218365 R=1.350
83 H 31.057037857356 0.861469084979 14.983375096385 R=1.350
84 H 29.136479215461 2.417835218699 12.174612585664 R=1.350
85 H 27.771355936696 3.032839231955 13.126231894516 R=1.350
86 H 27.947618867612 1.282834492285 12.839974064042 R=1.350
87 H 26.685506708996 1.525590461587 14.629666865712 R=1.350
88 H 25.393371081298 1.346811127889 16.725212475889 R=1.350
89 H 26.486895133397 1.750757848781 18.908262853379 R=1.350
90 H 30.135363152486 2.029447068102 19.360770884613 R=1.350
91 H 29.848891443575 4.173557484809 20.499999575556 R=1.350
92 H 28.253045285577 4.409452651567 19.737878977929 R=1.350
93 H 29.720324304160 4.432314480270 18.740081344983 R=1.350
94 H 28.285571792343 0.701744704750 20.469770706863 R=1.350
95 H 27.431564690320 2.229070823010 20.799515840015 R=1.350
96 H 29.025735270636 1.941110813883 21.513820023892 R=1.350
97 H 32.612631360234 9.270601017819 17.052930333894 R=1.350
98 H 32.215100788147 10.488092772986 19.161308828527 R=1.350
99 H 31.248260601880 11.176992787323 17.835794791225 R=1.350
100 H 32.720195112782 12.020292148907 18.394915610074 R=1.350
101 H 35.061184767979 10.859567027425 18.007165268974 R=1.350
102 H 35.113237091535 9.339940911149 17.070786440895 R=1.350
103 H 34.408840963777 9.369010210632 18.702572988528 R=1.350
104 H 35.168930440956 11.695423230640 16.042879986692 R=1.350
105 H 35.202868321627 12.823901473821 13.844943729552 R=1.350
106 H 33.254903092695 12.669336487984 12.327182516820 R=1.350
107 H 29.977194239819 11.196714292244 13.314708580056 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 30
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
30
108 H 31.958331216344 10.018227815986 11.296655478714 R=1.350
109 H 30.187057618209 9.783546277553 11.304575698374 R=1.350
110 H 31.184458750765 9.120998900303 12.626296917154 R=1.350
111 H 30.611205360448 13.425490155694 12.289275537700 R=1.350
112 H 29.773115841882 12.320653970924 11.169547153886 R=1.350
113 H 31.522316483782 12.553121693623 11.032881086234 R=1.350
114 H 26.892824251050 5.682552790715 18.393224162307 R=1.350
115 H 26.314426892599 4.259000533897 16.467126596354 R=1.350
116 H 27.057535585286 4.866074324684 14.192483018688 R=1.350
117 H 29.500645604090 7.522016678476 13.461743480516 R=1.350
118 H 29.224471198288 5.129535205363 12.774884523280 R=1.350
119 H 28.970204407733 6.284833436964 11.442903261021 R=1.350
120 H 27.574974477859 5.493941365693 12.198292138303 R=1.350
121 H 27.564569580432 9.067845942276 13.552871630063 R=1.350
122 H 26.515395408361 7.822349949086 12.819734715184 R=1.350
123 H 27.863444511091 8.524416143506 11.884512850739 R=1.350
124 H 28.406694974949 9.013195070718 18.134320934797 R=1.350
125 H 30.589429451128 7.765353189870 17.979371963975 R=1.350
126 H 30.010424058749 6.651602628807 19.232023579521 R=1.350
127 H 30.242783991982 8.376412839417 19.618569864401 R=1.350
128 H 27.816070073682 8.521971456053 20.439077318380 R=1.350
129 H 27.622002528475 6.794536282163 20.105283558610 R=1.350
130 H 26.476330636570 7.965053790595 19.405069144963 R=1.350
131 H 27.653444181006 10.055272096757 16.117173745812 R=1.350
132 H 29.605253744816 11.912534342807 15.700768485416 R=1.350
END
GUIBONDS
1 1 45 3
2 1 2 3.0
3 2 3 3
4 3 4 1.0
5 3 7 1.0
6 4 5 1.0
7 4 20 1.0
8 5 61 1.0
9 5 6 2.0
10 6 62 1.0
11 6 7 1.0
12 7 8 1.0
13 8 9 1.5
14 8 13 1.5
15 9 10 1.5
NATURE CHEMISTRY | www.nature.com/naturechemistry 31
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31
16 9 17 1.0
17 10 63 1.0
18 10 11 1.5
19 11 64 1.0
20 11 12 1.5
21 12 65 1.0
22 12 13 1.5
23 13 14 1.0
24 14 66 1.0
25 14 15 1.0
26 14 16 1.0
27 15 68 1.0
28 15 69 1.0
29 15 67 1.0
30 16 72 1.0
31 16 71 1.0
32 16 70 1.0
33 17 73 1.0
34 17 19 1.0
35 17 18 1.0
36 18 74 1.0
37 18 75 1.0
38 18 76 1.0
39 19 79 1.0
40 19 78 1.0
41 19 77 1.0
42 20 28 1.5
43 20 21 1.5
44 21 25 1.5
45 21 22 1.0
46 22 80 1.0
47 22 24 1.0
48 22 23 1.0
49 23 83 1.0
50 23 81 1.0
51 23 82 1.0
52 24 85 1.0
53 24 84 1.0
54 24 86 1.0
55 25 87 1.0
56 25 26 1.5
57 26 88 1.0
58 26 27 1.5
59 27 89 1.0
60 27 28 1.5
61 28 29 1.0
62 29 90 1.0
63 29 30 1.0
64 29 31 1.0
65 30 93 1.0
66 30 91 1.0
67 30 92 1.0
68 31 94 1.0
69 31 96 1.0
70 31 95 1.0
71 32 60 1.0
72 32 33 1.0
73 32 45 1.0
74 33 34 1.5
75 33 41 1.5
76 34 38 1.5
77 34 35 1.0
78 35 97 1.0
79 35 37 1.0
80 35 36 1.0
81 36 99 1.0
82 36 98 1.0
83 36 100 1.0
84 37 102 1.0
85 37 103 1.0
86 37 101 1.0
87 38 104 1.0
88 38 39 1.5
89 39 105 1.0
90 39 40 1.5
91 40 106 1.0
92 40 41 1.5
93 41 42 1.0
94 42 107 1.0
95 42 43 1.0
96 42 44 1.0
97 43 110 1.0
98 43 109 1.0
99 43 108 1.0
100 44 111 1.0
101 44 112 1.0
102 44 113 1.0
103 45 46 1.0
104 46 59 1.0
105 46 47 1.0
106 47 48 1.5
107 47 52 1.5
108 48 49 1.5
109 48 56 1.0
110 49 114 1.0
111 49 50 1.5
112 50 115 1.0
113 50 51 1.5
114 51 116 1.0
NATURE CHEMISTRY | www.nature.com/naturechemistry 32
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
32
115 51 52 1.5
116 52 53 1.0
117 53 117 1.0
118 53 54 1.0
119 53 55 1.0
120 54 118 1.0
121 54 119 1.0
122 54 120 1.0
123 55 121 1.0
124 55 123 1.0
125 55 122 1.0
126 56 124 1.0
127 56 57 1.0
128 56 58 1.0
129 57 125 1.0
130 57 127 1.0
131 57 126 1.0
132 58 130 1.0
133 58 128 1.0
134 58 129 1.0
135 59 131 1.0
136 59 60 2.0
137 60 132 1.0
END
SOLVATION
Surf Esurf
Solvent name=Hexane cav0=0.0 cav1=0.0067639
Charged method=CONJ
C-Mat POT
SCF VAR ALL
CSMRSP
END
BASIS
type TZP
core Large
createoutput None
END
XC
GGA Becke88 Perdew86
DISPERSION Grimme3
END
GEOMETRY
optim Delocalized
iterations 100
NATURE CHEMISTRY | www.nature.com/naturechemistry 33
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
33
END
SAVE TAPE21 TAPE13
SCF
iterations 200
END
BeckeGrid
Quality Good
End
STOFIT
NOPRINT LOGFILE
eor
---------------------------------------------------------
NATURE CHEMISTRY | www.nature.com/naturechemistry 34
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
34
Supplementary Figure 19. DFT Optimized structure of the 1,1 (left) and 1,2 isomers (right) of Ar'2Ge2 along with the corresponding DFT calculated energies. where Ar' = 2,6-(2,6-iPr2C6H3)2C6H3}2.
---------------------------------------------
#! /bin/sh
# ==============================
# {2,6-(2,6-iPr2C6H3)2C6H3}2GeGe
# ==============================
"$ADFBIN/adf" <<eor
ATOMS
1 H -1.922422000000 3.312875000000 0.926728000000 R=1.350
2 C 0.903538000000 10.093328000000 0.922664000000 R=1.700
3 C 0.455440000000 11.347143000000 1.428255000000 R=1.700
4 C 1.211895000000 12.006240000000 2.418837000000 R=1.700
5 H 0.791705000000 12.909099000000 2.856577000000 R=1.350
6 C 2.442234000000 11.544573000000 2.858219000000 R=1.700
7 H 3.018367000000 12.097728000000 3.599641000000 R=1.350
8 C 2.881936000000 10.318823000000 2.377649000000 R=1.700
9 H 3.801547000000 9.875809000000 2.762665000000 R=1.350
10 C 2.104247000000 9.563444000000 1.482584000000 R=1.700
11 C 2.599301000000 8.139286000000 1.458208000000 R=1.700
12 C 3.737577000000 7.767844000000 0.686079000000 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 35
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
35
13 C 4.423705000000 6.592915000000 1.017470000000 R=1.700
14 H 5.307514000000 6.305996000000 0.447764000000 R=1.350
15 C 3.982900000000 5.770683000000 2.060032000000 R=1.700
16 H 4.532719000000 4.860822000000 2.303905000000 R=1.350
17 C 2.838624000000 6.103899000000 2.778289000000 R=1.700
18 H 2.499268000000 5.453333000000 3.585816000000 R=1.350
19 C 2.131438000000 7.292412000000 2.507166000000 R=1.700
20 C -0.830273000000 12.068695000000 1.150990000000 R=1.700
21 C -0.796414000000 13.427092000000 0.724096000000 R=1.700
22 C -1.993118000000 14.158739000000 0.712003000000 R=1.700
23 H -1.985523000000 15.188219000000 0.348495000000 R=1.350
24 C -3.174464000000 13.623791000000 1.215698000000 R=1.700
25 H -4.084813000000 14.224311000000 1.240461000000 R=1.350
26 C -3.180638000000 12.319827000000 1.705632000000 R=1.700
27 H -4.086263000000 11.926014000000 2.168244000000 R=1.350
28 C -2.041792000000 11.509297000000 1.637080000000 R=1.700
29 C -2.101023000000 10.112906000000 2.249695000000 R=1.700
30 H -1.210644000000 9.560385000000 1.927063000000 R=1.350
31 C -2.035403000000 10.193805000000 3.784820000000 R=1.700
32 H -1.122295000000 10.718563000000 4.105186000000 R=1.350
33 H -2.024046000000 9.184422000000 4.224671000000 R=1.350
34 H -2.904954000000 10.736709000000 4.188590000000 R=1.350
35 C -3.307532000000 9.292036000000 1.771562000000 R=1.700
36 H -3.236792000000 8.264900000000 2.160408000000 R=1.350
37 H -3.333761000000 9.238641000000 0.672873000000 R=1.350
38 H -4.261937000000 9.715793000000 2.120631000000 R=1.350
39 C 0.501423000000 14.190914000000 0.427449000000 R=1.700
40 H 1.334607000000 13.476380000000 0.467189000000 R=1.350
41 C 0.747545000000 15.272601000000 1.503285000000 R=1.700
42 H 0.698161000000 14.872355000000 2.524603000000 R=1.350
43 H -0.009610000000 16.068211000000 1.425843000000 R=1.350
44 H 1.737509000000 15.733312000000 1.363316000000 R=1.350
45 C 0.545842000000 14.857027000000 -0.953171000000 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 36
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
36
46 H 0.515801000000 14.106649000000 -1.745319000000 R=1.350
47 H 1.473489000000 15.441379000000 -1.056377000000 R=1.350
48 H -0.303305000000 15.540316000000 -1.105651000000 R=1.350
49 C 4.204042000000 8.650792000000 -0.465628000000 R=1.700
50 H 3.313109000000 9.198028000000 -0.816296000000 R=1.350
51 C 5.256127000000 9.688116000000 -0.026114000000 R=1.700
52 H 4.854725000000 10.382304000000 0.722459000000 R=1.350
53 H 5.587062000000 10.277157000000 -0.895345000000 R=1.350
54 H 6.137918000000 9.184610000000 0.400661000000 R=1.350
55 C 4.752965000000 7.822831000000 -1.638198000000 R=1.700
56 H 4.083840000000 6.987391000000 -1.882335000000 R=1.350
57 H 5.747823000000 7.412688000000 -1.406379000000 R=1.350
58 H 4.858035000000 8.454978000000 -2.531311000000 R=1.350
59 C 1.002293000000 7.729950000000 3.439419000000 R=1.700
60 H 0.557549000000 8.642025000000 3.020745000000 R=1.350
61 C 1.565873000000 8.095307000000 4.826723000000 R=1.700
62 H 2.342213000000 8.869619000000 4.745220000000 R=1.350
63 H 2.005998000000 7.214118000000 5.319187000000 R=1.350
64 H 0.760886000000 8.481619000000 5.470019000000 R=1.350
65 C -0.123420000000 6.693265000000 3.558924000000 R=1.700
66 H -0.886173000000 7.048589000000 4.268025000000 R=1.350
67 H 0.245408000000 5.722433000000 3.923399000000 R=1.350
68 H -0.605287000000 6.539947000000 2.584089000000 R=1.350
69 Ge -0.014354000000 8.672691000000 -0.334450000000 R=2.033
70 C -1.518590000000 8.593675000000 -1.815534000000 R=1.700
71 C -1.667585000000 7.260980000000 -2.299636000000 R=1.700
72 C -2.638949000000 6.938830000000 -3.262376000000 R=1.700
73 H -2.705996000000 5.905307000000 -3.605263000000 R=1.350
74 C -3.406877000000 7.927053000000 -3.863809000000 R=1.700
75 H -4.120978000000 7.683942000000 -4.650451000000 R=1.350
76 C -3.176863000000 9.242700000000 -3.489346000000 R=1.700
77 H -3.683814000000 10.044777000000 -4.021582000000 R=1.350
78 C -2.288597000000 9.603898000000 -2.454157000000 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 37
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
37
79 C -2.188906000000 11.091501000000 -2.296258000000 R=1.700
80 C -3.363474000000 11.851792000000 -2.031908000000 R=1.700
81 C -3.304058000000 13.248686000000 -2.150721000000 R=1.700
82 H -4.190030000000 13.841975000000 -1.916079000000 R=1.350
83 C -2.162350000000 13.887837000000 -2.623577000000 R=1.700
84 H -2.151084000000 14.970521000000 -2.756885000000 R=1.350
85 C -1.040054000000 13.129549000000 -2.948169000000 R=1.700
86 H -0.171015000000 13.622021000000 -3.385557000000 R=1.350
87 C -1.010142000000 11.744606000000 -2.749611000000 R=1.700
88 C 0.232016000000 10.977553000000 -3.196629000000 R=1.700
89 H 0.156346000000 9.951932000000 -2.819183000000 R=1.350
90 C 0.280920000000 10.885866000000 -4.732467000000 R=1.700
91 H -0.623276000000 10.391736000000 -5.119206000000 R=1.350
92 H 0.345318000000 11.888218000000 -5.184653000000 R=1.350
93 H 1.156774000000 10.304777000000 -5.059909000000 R=1.350
94 C 1.533898000000 11.552098000000 -2.619557000000 R=1.700
95 H 2.375433000000 10.887903000000 -2.868772000000 R=1.350
96 H 1.763110000000 12.548792000000 -3.027394000000 R=1.350
97 H 1.475834000000 11.631061000000 -1.523743000000 R=1.350
98 C -4.738881000000 11.220868000000 -1.776650000000 R=1.700
99 H -4.608877000000 10.132360000000 -1.712035000000 R=1.350
100 C -5.698731000000 11.519421000000 -2.950215000000 R=1.700
101 H -5.274195000000 11.244255000000 -3.925051000000 R=1.350
102 H -6.643457000000 10.969330000000 -2.820806000000 R=1.350
103 H -5.936059000000 12.593856000000 -2.987214000000 R=1.350
104 C -5.410279000000 11.669704000000 -0.472786000000 R=1.700
105 H -6.414736000000 11.225108000000 -0.396812000000 R=1.350
106 H -4.821313000000 11.355375000000 0.390863000000 R=1.350
107 H -5.518331000000 12.763837000000 -0.425227000000 R=1.350
108 C -0.720766000000 6.103175000000 -2.112931000000 R=1.700
109 C -1.064375000000 5.001234000000 -1.281705000000 R=1.700
110 C -0.381086000000 3.784005000000 -1.458433000000 R=1.700
111 H -0.649516000000 2.923989000000 -0.844927000000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 38
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
38
112 C 0.639048000000 3.664686000000 -2.401500000000 R=1.700
113 H 1.157725000000 2.713059000000 -2.523644000000 R=1.350
114 C 1.003032000000 4.759734000000 -3.185519000000 R=1.700
115 H 1.806020000000 4.656064000000 -3.917211000000 R=1.350
116 C 0.329289000000 5.984894000000 -3.071480000000 R=1.700
117 C 0.644935000000 7.122567000000 -4.038919000000 R=1.700
118 H -0.020735000000 7.959996000000 -3.796061000000 R=1.350
119 C 0.332219000000 6.712756000000 -5.489318000000 R=1.700
120 H -0.712728000000 6.383554000000 -5.588447000000 R=1.350
121 H 0.488461000000 7.569456000000 -6.162525000000 R=1.350
122 H 0.984808000000 5.891938000000 -5.825216000000 R=1.350
123 C 2.084223000000 7.631530000000 -3.895730000000 R=1.700
124 H 2.273971000000 8.443161000000 -4.613952000000 R=1.350
125 H 2.246418000000 8.020809000000 -2.882147000000 R=1.350
126 H 2.818999000000 6.834754000000 -4.086197000000 R=1.350
127 C -2.216873000000 5.115020000000 -0.287477000000 R=1.700
128 H -2.351663000000 6.188856000000 -0.081891000000 R=1.350
129 C -3.530886000000 4.572104000000 -0.883953000000 R=1.700
130 H -3.828269000000 5.128572000000 -1.782030000000 R=1.350
131 H -3.421376000000 3.509628000000 -1.152536000000 R=1.350
132 H -4.342911000000 4.655510000000 -0.145511000000 R=1.350
133 C -1.920867000000 4.407234000000 1.044294000000 R=1.700
134 H -0.943496000000 4.706935000000 1.446750000000 R=1.350
135 H -2.693806000000 4.659128000000 1.784742000000 R=1.350
136 Ge 1.042175000000 6.532138000000 -0.109706000000 R=2.033
END
GUIBONDS
1 133 1 1.0
2 133 135 1.0
3 2 10 1.5
4 2 3 1.0
5 3 4 1.5
6 3 20 1.0
7 4 5 1.0
8 4 6 1.5
9 6 7 1.0
10 6 8 1.5
11 8 9 1.0
12 8 10 1.5
13 10 11 1.0
14 11 12 1.5
15 11 19 1.5
NATURE CHEMISTRY | www.nature.com/naturechemistry 39
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
39
16 12 13 1.5
17 12 49 1.0
18 13 14 1.0
19 13 15 1.5
20 15 16 1.0
21 15 17 1.5
22 17 18 1.0
23 17 19 1.5
24 19 59 1.0
25 20 21 1.5
26 20 28 1.5
27 21 22 1.5
28 21 39 1.0
29 22 23 1.0
30 22 24 1.5
31 24 25 1.0
32 24 26 1.5
33 26 27 1.0
34 26 28 1.5
35 28 29 1.0
36 29 30 1.0
37 29 35 1.0
38 29 31 1.0
39 31 33 1.0
40 31 32 1.0
41 31 34 1.0
42 35 38 1.0
43 35 36 1.0
44 35 37 1.0
45 39 40 1.0
46 39 45 1.0
47 39 41 1.0
48 41 43 1.0
49 41 44 1.0
50 41 42 1.0
51 45 46 1.0
52 45 48 1.0
53 45 47 1.0
54 49 50 1.0
55 49 51 1.0
56 49 55 1.0
57 51 54 1.0
58 51 52 1.0
59 51 53 1.0
60 55 57 1.0
61 55 56 1.0
62 55 58 1.0
63 59 60 1.0
64 59 61 1.0
65 59 65 1.0
66 61 64 1.0
67 61 63 1.0
68 61 62 1.0
69 65 67 1.0
70 65 66 1.0
71 65 68 1.0
72 69 70 1.5
73 70 78 1.5
74 70 71 1.0
75 71 72 1.5
76 71 108 1.0
77 72 73 1.0
78 72 74 1.5
79 74 75 1.0
80 74 76 1.5
81 76 77 1.0
82 76 78 1.5
83 78 79 1.0
84 79 80 1.5
85 79 87 1.5
86 80 81 1.5
87 80 98 1.0
88 81 82 1.0
89 81 83 1.5
90 83 84 1.0
91 83 85 1.5
92 85 86 1.0
93 85 87 1.5
94 87 88 1.0
95 88 89 1.0
96 88 90 1.0
97 88 94 1.0
98 90 93 1.0
99 90 92 1.0
100 90 91 1.0
101 94 96 1.0
102 94 95 1.0
103 94 97 1.0
104 98 99 1.0
105 98 100 1.0
106 98 104 1.0
107 100 103 1.0
108 100 101 1.0
109 100 102 1.0
110 104 106 1.0
111 104 105 1.0
112 104 107 1.0
113 108 109 1.5
114 108 116 1.5
NATURE CHEMISTRY | www.nature.com/naturechemistry 40
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
40
115 109 110 1.5
116 109 127 1.0
117 110 111 1.0
118 110 112 1.5
119 112 113 1.0
120 112 114 1.5
121 114 115 1.0
122 114 116 1.5
123 116 117 1.0
124 117 118 1.0
125 117 123 1.0
126 117 119 1.0
127 119 121 1.0
128 119 120 1.0
129 119 122 1.0
130 123 126 1.0
131 123 124 1.0
132 123 125 1.0
133 127 128 1.0
134 127 133 1.0
135 127 129 1.0
136 129 131 1.0
137 129 132 1.0
138 129 130 1.0
139 133 134 1.0
140 136 69 2.0
141 2 69 1.0
END
SOLVATION
Surf Esurf
Solvent name=Hexane cav0=0.0 cav1=0.0067639
Charged method=CONJ
C-Mat POT
SCF VAR ALL
CSMRSP
END
BASIS
type TZP
core Large
createoutput None
END
XC
GGA Becke88 Perdew86
DISPERSION Grimme3
END
NATURE CHEMISTRY | www.nature.com/naturechemistry 41
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
41
GEOMETRY
optim Delocalized
END
SAVE TAPE21 TAPE13
FULLSCF
BeckeGrid
Quality Good
End
NOPRINT LOGFILE
eor
--------------------------------------
#! /bin/sh
# ==============================
# {2,6-(2,6-iPr2C6H3)2C6H3}GeGe{2,6-(2,6-iPr2C6H3)2C6H3}
# ==============================
"$ADFBIN/adf" <<eor
ATOMS
1 Ge 0.048438000000 11.279910000000 0.506549000000 R=2.033
2 C 1.273555000000 11.896889000000 1.957073000000 R=1.700
3 C 1.110123000000 13.224760000000 2.409550000000 R=1.700
4 C 1.931761000000 13.729405000000 3.415481000000 R=1.700
5 H 1.815024000000 14.624431000000 3.709328000000 R=1.350
6 C 2.913953000000 12.945155000000 3.992505000000 R=1.700
7 H 3.474931000000 13.301278000000 4.671301000000 R=1.350
8 C 3.069709000000 11.630002000000 3.567740000000 R=1.700
9 H 3.732393000000 11.083714000000 3.972119000000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 42
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
42
10 C 2.267581000000 11.100741000000 2.557191000000 R=1.700
11 C 2.495778000000 9.691634000000 2.117136000000 R=1.700
12 C 3.535699000000 9.436645000000 1.207244000000 R=1.700
13 C 3.706807000000 8.120877000000 0.778816000000 R=1.700
14 H 4.380044000000 7.924558000000 0.136970000000 R=1.350
15 C 2.921629000000 7.100716000000 1.264580000000 R=1.700
16 H 3.062353000000 6.211639000000 0.958787000000 R=1.350
17 C 1.925365000000 7.355705000000 2.194699000000 R=1.700
18 H 1.405644000000 6.638330000000 2.538716000000 R=1.350
19 C 1.681176000000 8.653421000000 2.624720000000 R=1.700
20 C 0.026386000000 14.113017000000 1.875210000000 R=1.700
21 C 0.334220000000 15.096663000000 0.918971000000 R=1.700
22 C -0.714816000000 15.955174000000 0.519210000000 R=1.700
23 H -0.553302000000 16.620443000000 -0.138562000000 R=1.350
24 C -1.974938000000 15.836808000000 1.079830000000 R=1.700
25 H -2.665766000000 16.429663000000 0.810669000000 R=1.350
26 C -2.233999000000 14.880650000000 2.009950000000 R=1.700
27 H -3.108728000000 14.815211000000 2.376264000000 R=1.350
28 C -1.261721000000 14.004703000000 2.433600000000 R=1.700
29 C -1.567157000000 13.033980000000 3.562803000000 R=1.700
30 H -0.833152000000 12.355582000000 3.593064000000 R=1.350
31 C -1.579950000000 13.771048000000 4.905424000000 R=1.700
32 H -0.705221000000 14.187482000000 5.056727000000 R=1.350
33 H -1.770248000000 13.135114000000 5.625310000000 R=1.350
34 H -2.272378000000 14.466473000000 4.889497000000 R=1.350
35 C -2.883249000000 12.291989000000 3.370090000000 R=1.700
36 H -2.963206000000 11.588359000000 4.046974000000 R=1.350
37 H -2.902439000000 11.889914000000 2.476602000000 R=1.350
38 H -3.628449000000 12.919717000000 3.460872000000 R=1.350
39 C 1.738265000000 15.262416000000 0.369499000000 R=1.700
40 H 2.265981000000 14.456216000000 0.635475000000 R=1.350
41 C 2.421098000000 16.497359000000 0.993826000000 R=1.700
42 H 2.462676000000 16.390686000000 1.966947000000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 43
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
43
43 H 1.906175000000 17.301508000000 0.775630000000 R=1.350
44 H 3.329409000000 16.583518000000 0.637068000000 R=1.350
45 C 1.773446000000 15.356780000000 -1.157871000000 R=1.700
46 H 1.280911000000 14.603917000000 -1.543297000000 R=1.350
47 H 2.704146000000 15.330112000000 -1.465256000000 R=1.350
48 H 1.359269000000 16.197854000000 -1.441366000000 R=1.350
49 C 4.440812000000 10.538452000000 0.681663000000 R=1.700
50 H 4.308083000000 11.333985000000 1.270951000000 R=1.350
51 C 5.923215000000 10.166738000000 0.753333000000 R=1.700
52 H 6.169482000000 9.982112000000 1.683452000000 R=1.350
53 H 6.463724000000 10.911397000000 0.414094000000 R=1.350
54 H 6.087926000000 9.370795000000 0.207047000000 R=1.350
55 C 4.065014000000 10.964733000000 -0.740592000000 R=1.700
56 H 3.131116000000 11.260135000000 -0.756518000000 R=1.350
57 H 4.178553000000 10.205715000000 -1.348991000000 R=1.350
58 H 4.645502000000 11.701186000000 -1.024087000000 R=1.350
59 C 0.617268000000 8.942873000000 3.679068000000 R=1.700
60 H 0.326225000000 9.891851000000 3.556432000000 R=1.350
61 C 1.205752000000 8.829226000000 5.067876000000 R=1.700
62 H 1.958947000000 9.450800000000 5.155473000000 R=1.350
63 H 1.519183000000 7.912250000000 5.215994000000 R=1.350
64 H 0.521320000000 9.052828000000 5.732019000000 R=1.350
65 C -0.631660000000 8.062002000000 3.554839000000 R=1.700
66 H -1.320890000000 8.384072000000 4.172795000000 R=1.350
67 H -0.401384000000 7.136821000000 3.774628000000 R=1.350
68 H -0.970678000000 8.105081000000 2.635869000000 R=1.350
69 Ge -0.048438000000 9.234090000000 -0.506549000000 R=2.033
70 C -1.273555000000 8.617111000000 -1.957073000000 R=1.700
71 C -1.110123000000 7.289240000000 -2.409550000000 R=1.700
72 C -1.931761000000 6.784595000000 -3.415481000000 R=1.700
73 H -1.815024000000 5.889569000000 -3.709328000000 R=1.350
74 C -2.913953000000 7.568845000000 -3.992505000000 R=1.700
75 H -3.474931000000 7.212722000000 -4.671301000000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 44
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
44
76 C -3.069709000000 8.883998000000 -3.567740000000 R=1.700
77 H -3.732393000000 9.430286000000 -3.972119000000 R=1.350
78 C -2.267581000000 9.413259000000 -2.557191000000 R=1.700
79 C -2.495778000000 10.822366000000 -2.117136000000 R=1.700
80 C -3.535699000000 11.077355000000 -1.207244000000 R=1.700
81 C -3.706807000000 12.393123000000 -0.778816000000 R=1.700
82 H -4.380044000000 12.589442000000 -0.136970000000 R=1.350
83 C -2.921629000000 13.413284000000 -1.264580000000 R=1.700
84 H -3.062353000000 14.302361000000 -0.958787000000 R=1.350
85 C -1.925365000000 13.158295000000 -2.194699000000 R=1.700
86 H -1.405644000000 13.875670000000 -2.538716000000 R=1.350
87 C -1.681176000000 11.860579000000 -2.624720000000 R=1.700
88 C -0.617268000000 11.571127000000 -3.679068000000 R=1.700
89 H -0.326225000000 10.622149000000 -3.556432000000 R=1.350
90 C -1.205752000000 11.684774000000 -5.067876000000 R=1.700
91 H -1.958946000000 11.063200000000 -5.155473000000 R=1.350
92 H -1.519183000000 12.601750000000 -5.215994000000 R=1.350
93 H -0.521320000000 11.461172000000 -5.732019000000 R=1.350
94 C 0.631660000000 12.451998000000 -3.554839000000 R=1.700
95 H 1.320890000000 12.129928000000 -4.172795000000 R=1.350
96 H 0.401384000000 13.377179000000 -3.774628000000 R=1.350
97 H 0.970678000000 12.408919000000 -2.635869000000 R=1.350
98 C -4.440812000000 9.975548000000 -0.681663000000 R=1.700
99 H -4.308083000000 9.180015000000 -1.270951000000 R=1.350
100 C -5.923215000000 10.347262000000 -0.753333000000 R=1.700
101 H -6.169482000000 10.531888000000 -1.683452000000 R=1.350
102 H -6.463724000000 9.602603000000 -0.414094000000 R=1.350
103 H -6.087926000000 11.143205000000 -0.207047000000 R=1.350
104 C -4.065014000000 9.549267000000 0.740592000000 R=1.700
105 H -3.131116000000 9.253865000000 0.756518000000 R=1.350
106 H -4.178553000000 10.308285000000 1.348991000000 R=1.350
107 H -4.645502000000 8.812814000000 1.024087000000 R=1.350
108 C -0.026386000000 6.400983000000 -1.875210000000 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 45
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
45
109 C -0.334220000000 5.417337000000 -0.918971000000 R=1.700
110 C 0.714816000000 4.558826000000 -0.519210000000 R=1.700
111 H 0.553302000000 3.893557000000 0.138562000000 R=1.350
112 C 1.974938000000 4.677192000000 -1.079830000000 R=1.700
113 H 2.665766000000 4.084337000000 -0.810669000000 R=1.350
114 C 2.233999000000 5.633350000000 -2.009950000000 R=1.700
115 H 3.108728000000 5.698789000000 -2.376264000000 R=1.350
116 C 1.261721000000 6.509297000000 -2.433600000000 R=1.700
117 C 1.567157000000 7.480020000000 -3.562803000000 R=1.700
118 H 0.833152000000 8.158418000000 -3.593064000000 R=1.350
119 C 1.579950000000 6.742952000000 -4.905424000000 R=1.700
120 H 0.705221000000 6.326518000000 -5.056727000000 R=1.350
121 H 1.770248000000 7.378886000000 -5.625310000000 R=1.350
122 H 2.272378000000 6.047527000000 -4.889497000000 R=1.350
123 C 2.883249000000 8.222011000000 -3.370090000000 R=1.700
124 H 2.963206000000 8.925641000000 -4.046974000000 R=1.350
125 H 2.902439000000 8.624086000000 -2.476602000000 R=1.350
126 H 3.628449000000 7.594283000000 -3.460872000000 R=1.350
127 C -1.738265000000 5.251584000000 -0.369499000000 R=1.700
128 H -2.265981000000 6.057784000000 -0.635475000000 R=1.350
129 C -2.421098000000 4.016641000000 -0.993826000000 R=1.700
130 H -2.462676000000 4.123314000000 -1.966947000000 R=1.350
131 H -1.906175000000 3.212492000000 -0.775630000000 R=1.350
132 H -3.329409000000 3.930482000000 -0.637068000000 R=1.350
133 C -1.773446000000 5.157220000000 1.157871000000 R=1.700
134 H -1.280911000000 5.910083000000 1.543297000000 R=1.350
135 H -2.704146000000 5.183888000000 1.465256000000 R=1.350
136 H -1.359269000000 4.316146000000 1.441366000000 R=1.350
END
GUIBONDS
1 1 2 1.5
2 1 69 2.0
3 2 10 1.5
4 2 3 1.0
5 3 4 1.5
6 3 20 1.0
NATURE CHEMISTRY | www.nature.com/naturechemistry 46
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
46
7 4 5 1.0
8 4 6 1.5
9 6 7 1.0
10 6 8 1.5
11 8 9 1.0
12 8 10 1.5
13 10 11 1.0
14 11 12 1.5
15 11 19 1.5
16 12 13 1.5
17 12 49 1.0
18 13 14 1.0
19 13 15 1.5
20 15 16 1.0
21 15 17 1.5
22 17 18 1.0
23 17 19 1.5
24 19 59 1.0
25 20 21 1.5
26 20 28 1.5
27 21 22 1.5
28 21 39 1.0
29 22 23 1.0
30 22 24 1.5
31 24 25 1.0
32 24 26 1.5
33 26 27 1.0
34 26 28 1.5
35 28 29 1.0
36 29 30 1.0
37 29 35 1.0
38 29 31 1.0
39 31 33 1.0
40 31 32 1.0
41 31 34 1.0
42 35 38 1.0
43 35 36 1.0
44 35 37 1.0
45 39 40 1.0
46 39 45 1.0
47 39 41 1.0
48 41 43 1.0
49 41 44 1.0
50 41 42 1.0
51 45 46 1.0
52 45 48 1.0
53 45 47 1.0
54 49 50 1.0
55 49 51 1.0
56 49 55 1.0
57 51 54 1.0
58 51 52 1.0
59 51 53 1.0
60 55 57 1.0
61 55 56 1.0
62 55 58 1.0
63 59 60 1.0
64 59 61 1.0
65 59 65 1.0
66 61 64 1.0
67 61 63 1.0
68 61 62 1.0
69 65 67 1.0
70 65 66 1.0
71 65 68 1.0
72 69 70 1.5
73 70 78 1.5
74 70 71 1.0
75 71 72 1.5
76 71 108 1.0
77 72 73 1.0
78 72 74 1.5
79 74 75 1.0
80 74 76 1.5
81 76 77 1.0
82 76 78 1.5
83 78 79 1.0
84 79 80 1.5
85 79 87 1.5
86 80 81 1.5
87 80 98 1.0
88 81 82 1.0
89 81 83 1.5
90 83 84 1.0
91 83 85 1.5
92 85 86 1.0
93 85 87 1.5
94 87 88 1.0
95 88 89 1.0
96 88 90 1.0
97 88 94 1.0
98 90 93 1.0
99 90 92 1.0
100 90 91 1.0
101 94 96 1.0
102 94 95 1.0
103 94 97 1.0
104 98 99 1.0
105 98 100 1.0
NATURE CHEMISTRY | www.nature.com/naturechemistry 47
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
47
106 98 104 1.0
107 100 103 1.0
108 100 101 1.0
109 100 102 1.0
110 104 106 1.0
111 104 105 1.0
112 104 107 1.0
113 108 109 1.5
114 108 116 1.5
115 109 110 1.5
116 109 127 1.0
117 110 111 1.0
118 110 112 1.5
119 112 113 1.0
120 112 114 1.5
121 114 115 1.0
122 114 116 1.5
123 116 117 1.0
124 117 118 1.0
125 117 123 1.0
126 117 119 1.0
127 119 121 1.0
128 119 120 1.0
129 119 122 1.0
130 123 126 1.0
131 123 124 1.0
132 123 125 1.0
133 127 128 1.0
134 127 133 1.0
135 127 129 1.0
136 129 131 1.0
137 129 132 1.0
138 129 130 1.0
139 133 134 1.0
140 133 136 1.0
141 133 135 1.0
END
SOLVATION
Surf Esurf
Solvent name=Hexane cav0=0.0 cav1=0.0067639
Charged method=CONJ
C-Mat POT
SCF VAR ALL
CSMRSP
END
BASIS
type TZP
core Large
createoutput None
END
XC
GGA Becke88 Perdew86
DISPERSION Grimme3
END
NATURE CHEMISTRY | www.nature.com/naturechemistry 48
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
48
GEOMETRY
optim Delocalized
END
SAVE TAPE21 TAPE13
FULLSCF
BeckeGrid
Quality Good
End
NOPRINT LOGFILE
eor
------------------------------------
#! /bin/sh
NATURE CHEMISTRY | www.nature.com/naturechemistry 49
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49
Supplementary Figure 20. DFT calculated energies for potential products arising from the reaction of 5 with one equivalent of H2.
# ==============================
# {(HCDippN)2B}Ge(H)Ge(H){B(DippNCH)2} # ==============================
"$ADFBIN/adf" <<eor
ATOMS
1 Ge 5.358767071000 5.306168979000 8.466430924000 R=2.033
2 H 5.814970781000 1.462424293000 5.414180891000 R=1.350
3 H 6.301069082000 4.040541102000 8.477758840000 R=1.350
4 N 4.440358176000 4.636684920000 11.413555060000 R=1.608
5 N 3.469229230000 6.581109168000 10.705101310000 R=1.608
6 B 4.400146361000 5.552648323000 10.289837850000 R=1.792
7 C 3.592874661000 5.120851081000 12.416144890000 R=1.700
8 H 3.469088353000 4.601669295000 13.360271940000 R=1.350
9 C 3.013449839000 6.279457881000 11.992534420000 R=1.700
10 H 2.304249946000 6.915523326000 12.510840220000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 50
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50
11 C 5.205741823000 3.428952846000 11.597302070000 R=1.700
12 C 4.647672424000 2.191709400000 11.204780790000 R=1.700
13 C 5.412214418000 1.031133911000 11.397879330000 R=1.700
14 H 5.001488645000 0.064519301230 11.098794270000 R=1.350
15 C 6.684378964000 1.090170528000 11.964243850000 R=1.700
16 H 7.263381407000 0.176124564700 12.105819350000 R=1.350
17 C 7.214179252000 2.320218131000 12.350425760000 R=1.700
18 H 8.211104139000 2.360550278000 12.794211240000 R=1.350
19 C 6.491236875000 3.510247099000 12.178643970000 R=1.700
20 C 3.255392437000 2.086161744000 10.590398870000 R=1.700
21 H 2.851486400000 3.104906227000 10.516756380000 R=1.350
22 C 2.302405565000 1.271037037000 11.485277420000 R=1.700
23 H 2.646275214000 0.230502778500 11.590204100000 R=1.350
24 H 1.292252248000 1.247926063000 11.048669880000 R=1.350
25 H 2.230078784000 1.703494898000 12.493521040000 R=1.350
26 C 3.303506123000 1.500858379000 9.167231677000 R=1.700
27 H 3.955203960000 2.096946401000 8.513041278000 R=1.350
28 H 2.295316235000 1.482768101000 8.726066159000 R=1.350
29 H 3.685121432000 0.468246337400 9.172372354000 R=1.350
30 C 7.101824489000 4.836288871000 12.620962440000 R=1.700
31 H 6.383254291000 5.628297275000 12.370625490000 R=1.350
32 C 7.326786750000 4.875048156000 14.144610490000 R=1.700
33 H 6.391290986000 4.697549535000 14.694522230000 R=1.350
34 H 7.721878781000 5.856588447000 14.448089500000 R=1.350
35 H 8.052401902000 4.109580710000 14.460358040000 R=1.350
36 C 8.407905405000 5.141139885000 11.865621070000 R=1.700
37 H 9.182876069000 4.391321555000 12.087680660000 R=1.350
38 H 8.800099018000 6.125503081000 12.163327050000 R=1.350
39 H 8.245346005000 5.149168892000 10.778997960000 R=1.350
40 C 3.002945291000 7.747786861000 9.998930188000 R=1.700
41 C 1.876136572000 7.634595593000 9.153749994000 R=1.700
42 C 1.433024962000 8.787685634000 8.488502669000 R=1.700
43 H 0.566494619300 8.723339865000 7.827232562000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 51
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
51
44 C 2.077063566000 10.011487590000 8.658019284000 R=1.700
45 H 1.717996953000 10.896173090000 8.130094928000 R=1.350
46 C 3.183478546000 10.102746310000 9.500894808000 R=1.700
47 H 3.683214557000 11.064887810000 9.627022306000 R=1.350
48 C 3.669782747000 8.980156092000 10.187012480000 R=1.700
49 C 1.129146351000 6.317968053000 8.962727906000 R=1.700
50 H 1.665495918000 5.550430282000 9.536962505000 R=1.350
51 C -0.304909652700 6.398565929000 9.520854937000 R=1.700
52 H -0.307441709700 6.676521365000 10.584706540000 R=1.350
53 H -0.810772169100 5.426152233000 9.419116495000 R=1.350
54 H -0.902372152500 7.146335740000 8.976738078000 R=1.350
55 C 1.119394461000 5.871991901000 7.489663038000 R=1.700
56 H 0.582262415200 6.593618842000 6.855375076000 R=1.350
57 H 0.614798805700 4.898772616000 7.388978440000 R=1.350
58 H 2.142525792000 5.772316147000 7.100088112000 R=1.350
59 C 4.864236035000 9.118256348000 11.126855830000 R=1.700
60 H 5.193328198000 8.102813981000 11.387255480000 R=1.350
61 C 4.460355684000 9.829298860000 12.434171490000 R=1.700
62 H 4.115950434000 10.855683040000 12.232245150000 R=1.350
63 H 5.318606892000 9.888379434000 13.121087550000 R=1.350
64 H 3.647528880000 9.296868108000 12.948410590000 R=1.350
65 C 6.054736425000 9.834863546000 10.467616600000 R=1.700
66 H 6.360541227000 9.325907390000 9.542870378000 R=1.350
67 H 6.914873797000 9.848172774000 11.153962510000 R=1.350
68 H 5.814705058000 10.879964720000 10.220074140000 R=1.350
69 Ge 6.235140027000 7.034048427000 7.151713328000 R=2.033
70 H 4.720096810000 2.475281928000 4.453132515000 R=1.350
71 H 5.292683693000 8.299515527000 7.140283637000 R=1.350
72 N 7.146987468000 7.697896644000 4.200429155000 R=1.608
73 N 8.132549542000 5.763955173000 4.917762174000 R=1.608
74 B 7.193875692000 6.787241885000 5.328242550000 R=1.792
75 C 7.998659255000 7.215828356000 3.200388330000 R=1.700
76 H 8.119155012000 7.732027745000 2.254193548000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 52
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
52
77 C 8.585845298000 6.062903827000 3.628784286000 R=1.700
78 H 9.299083818000 5.429257205000 3.113075602000 R=1.350
79 C 6.375069001000 8.900737229000 4.011792890000 R=1.700
80 C 6.928303258000 10.142511680000 4.396706206000 R=1.700
81 C 6.158303218000 11.298672750000 4.199018257000 R=1.700
82 H 6.565270182000 12.268630780000 4.492361172000 R=1.350
83 C 4.885360081000 11.230985640000 3.635391777000 R=1.700
84 H 4.301898473000 12.141637430000 3.490151786000 R=1.350
85 C 4.360433828000 9.996626931000 3.256448270000 R=1.700
86 H 3.362974017000 9.949580190000 2.814555429000 R=1.350
87 C 5.088971222000 8.810694335000 3.432972853000 R=1.700
88 C 8.321191601000 10.257321290000 5.008086405000 R=1.700
89 H 8.729967042000 9.240787511000 5.085552644000 R=1.350
90 C 9.269054745000 11.072773830000 4.108108666000 R=1.700
91 H 8.920536049000 12.111369960000 3.999342346000 R=1.350
92 H 10.279829380000 11.102128300000 4.542899223000 R=1.350
93 H 9.341596303000 10.636353450000 3.101585773000 R=1.350
94 C 8.272772845000 10.848729240000 6.428730892000 R=1.700
95 H 7.624474055000 10.252935570000 7.086519765000 R=1.350
96 H 9.281535602000 10.873060950000 6.868264226000 R=1.350
97 H 7.886812795000 11.879714410000 6.419488776000 R=1.350
98 C 4.483586921000 7.480020105000 2.997577703000 R=1.700
99 H 5.205168734000 6.692107851000 3.252080627000 R=1.350
100 C 4.259021811000 7.432789049000 1.474089137000 R=1.700
101 H 5.193899572000 7.611284636000 0.923445562600 R=1.350
102 H 3.867883132000 6.448196020000 1.175403164000 R=1.350
103 H 3.530437687000 8.193821392000 1.154463992000 R=1.350
104 C 3.178547520000 7.174010590000 3.754208244000 R=1.700
105 H 2.400670416000 7.919593826000 3.528094009000 R=1.350
106 H 2.790267686000 6.186571615000 3.461602308000 R=1.350
107 H 3.341010863000 7.172186616000 4.840860786000 R=1.350
108 C 8.606150346000 4.602898093000 5.628292761000 R=1.700
109 C 9.724656582000 4.728584197000 6.482753785000 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 53
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
53
110 C 10.174691810000 3.580548005000 7.152040925000 R=1.700
111 H 11.034963110000 3.654577675000 7.820410411000 R=1.350
112 C 9.545872056000 2.349515929000 6.977424861000 R=1.700
113 H 9.910134171000 1.469027833000 7.508778754000 R=1.350
114 C 8.447775620000 2.245974048000 6.125202636000 R=1.700
115 H 7.959633852000 1.278387147000 5.994903075000 R=1.350
116 C 7.954951824000 3.363099496000 5.434814119000 R=1.700
117 C 10.456864940000 6.052859496000 6.677991077000 R=1.700
118 H 9.912409867000 6.815970921000 6.105479866000 R=1.350
119 C 11.891843950000 5.988823481000 6.119893329000 R=1.700
120 H 11.897376090000 5.714280200000 5.055170658000 R=1.350
121 H 12.387716610000 6.966034825000 6.224802357000 R=1.350
122 H 12.496585380000 5.245354864000 6.661877800000 R=1.350
123 C 10.461848710000 6.495566354000 8.151998262000 R=1.700
124 H 11.007427750000 5.778997903000 8.784791912000 R=1.350
125 H 10.955362950000 7.474218151000 8.254552625000 R=1.350
126 H 9.437723142000 6.582842999000 8.541952864000 R=1.350
127 C 6.769008452000 3.210916598000 4.486416393000 R=1.700
128 H 6.441061645000 4.222130212000 4.208896099000 R=1.350
129 C 7.184216697000 2.481732127000 3.192815611000 R=1.700
130 H 7.526432299000 1.458108789000 3.411558640000 R=1.350
131 H 6.332100896000 2.413341904000 2.499143778000 R=1.350
132 H 8.001880707000 3.006702084000 2.678495448000 R=1.350
133 C 5.574062385000 2.502434575000 5.146785419000 R=1.700
134 H 5.258919234000 3.025762904000 6.060288938000 R=1.350
END
GUIBONDS
1 133 2 1.0
2 1 3 1.0
3 1 6 3
4 1 69 3.0
5 4 7 1.0
6 4 6 1.0
7 4 11 1.0
8 5 9 1.0
9 5 6 1.0
10 5 40 1.0
11 7 8 1.0
12 7 9 2.0
13 9 10 1.0
14 11 19 1.5
15 11 12 1.5
NATURE CHEMISTRY | www.nature.com/naturechemistry 54
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
54
16 12 13 1.5
17 12 20 1.0
18 13 14 1.0
19 13 15 1.5
20 15 16 1.0
21 15 17 1.5
22 17 18 1.0
23 17 19 1.5
24 19 30 1.0
25 20 21 1.0
26 20 22 1.0
27 20 26 1.0
28 22 23 1.0
29 22 24 1.0
30 22 25 1.0
31 26 29 1.0
32 26 28 1.0
33 26 27 1.0
34 30 31 1.0
35 30 36 1.0
36 30 32 1.0
37 32 33 1.0
38 32 35 1.0
39 32 34 1.0
40 36 37 1.0
41 36 39 1.0
42 36 38 1.0
43 40 41 1.5
44 40 48 1.5
45 41 42 1.5
46 41 49 1.0
47 42 43 1.0
48 42 44 1.5
49 44 45 1.0
50 44 46 1.5
51 46 47 1.0
52 46 48 1.5
53 48 59 1.0
54 49 50 1.0
55 49 51 1.0
56 49 55 1.0
57 51 54 1.0
58 51 53 1.0
59 51 52 1.0
60 55 58 1.0
61 55 56 1.0
62 55 57 1.0
63 59 60 1.0
64 59 61 1.0
65 59 65 1.0
66 61 62 1.0
67 61 63 1.0
68 61 64 1.0
69 65 66 1.0
70 65 67 1.0
71 65 68 1.0
72 133 70 1.0
73 69 71 1.0
74 69 74 3
75 72 75 1.0
76 72 74 1.0
77 72 79 1.0
78 73 77 1.0
79 73 74 1.0
80 73 108 1.0
81 75 76 1.0
82 75 77 2.0
83 77 78 1.0
84 79 87 1.5
85 79 80 1.5
86 80 81 1.5
87 80 88 1.0
88 81 82 1.0
89 81 83 1.5
90 83 84 1.0
91 83 85 1.5
92 85 86 1.0
93 85 87 1.5
94 87 98 1.0
95 88 89 1.0
96 88 90 1.0
97 88 94 1.0
98 90 91 1.0
99 90 92 1.0
100 90 93 1.0
101 94 97 1.0
102 94 96 1.0
103 94 95 1.0
104 98 99 1.0
105 98 104 1.0
106 98 100 1.0
107 100 101 1.0
108 100 103 1.0
109 100 102 1.0
110 104 105 1.0
111 104 107 1.0
112 104 106 1.0
113 108 109 1.5
114 108 116 1.5
NATURE CHEMISTRY | www.nature.com/naturechemistry 55
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
55
115 109 110 1.5
116 109 117 1.0
117 110 111 1.0
118 110 112 1.5
119 112 113 1.0
120 112 114 1.5
121 114 115 1.0
122 114 116 1.5
123 116 127 1.0
124 117 118 1.0
125 117 119 1.0
126 117 123 1.0
127 119 122 1.0
128 119 121 1.0
129 119 120 1.0
130 123 126 1.0
131 123 124 1.0
132 123 125 1.0
133 127 128 1.0
134 127 129 1.0
135 127 133 1.0
136 129 130 1.0
137 129 131 1.0
138 129 132 1.0
139 133 134 1.0
END
SOLVATION
Surf Esurf
Solvent name=Hexane cav0=0.0 cav1=0.0067639
Charged method=CONJ
C-Mat POT
SCF VAR ALL
CSMRSP
END
BASIS
type TZP
core Large
createoutput None
END
XC
GGA Becke88 Perdew86
DISPERSION Grimme3
END
GEOMETRY
NATURE CHEMISTRY | www.nature.com/naturechemistry 56
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
56
optim Delocalized
END
SAVE TAPE21 TAPE13
SCF
iterations 150
END
FULLSCF
BeckeGrid
Quality Good
End
NOPRINT LOGFILE
eor
----------------------------------------------------
#! /bin/sh
# ==============================
# {(HCDippN)2B}2GeGeH2 # ==============================
"$ADFBIN/adf" <<eor
ATOMS
1 Ge 1.193856905000 7.092908025000 11.722543410000 R=2.033
2 Ge 0.593851930300 8.467810398000 13.520236660000 R=2.033
3 N 3.847098415000 6.228502430000 13.162199800000 R=1.608
4 N 3.845209383000 5.417633975000 11.022837060000 R=1.608
5 N -1.661075457000 5.647293418000 11.762438590000 R=1.608
NATURE CHEMISTRY | www.nature.com/naturechemistry 57
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
57
6 N -1.272386465000 6.684798726000 9.767712124000 R=1.608
7 B 3.022118572000 6.136874311000 11.974365360000 R=1.792
8 B -0.635966475600 6.352400971000 11.020227570000 R=1.792
9 C 5.065530281000 5.581387948000 12.913630100000 R=1.700
10 H 5.842069595000 5.527482652000 13.668192580000 R=1.350
11 C 5.065412204000 5.100143275000 11.644457280000 R=1.700
12 H 5.841292610000 4.557923451000 11.116224590000 R=1.350
13 C 3.726394353000 7.105747060000 14.295606290000 R=1.700
14 C 4.345705871000 8.371554844000 14.223653410000 R=1.700
15 C 4.254393380000 9.216687792000 15.340645810000 R=1.700
16 H 4.720972071000 10.202905720000 15.306324280000 R=1.350
17 C 3.558882797000 8.822888834000 16.480669090000 R=1.700
18 H 3.490336534000 9.493630348000 17.338186150000 R=1.350
19 C 2.932746812000 7.575424334000 16.520356790000 R=1.700
20 H 2.372794535000 7.291075117000 17.410211270000 R=1.350
21 C 2.999865233000 6.691903620000 15.433551840000 R=1.700
22 C 5.068273305000 8.851416680000 12.970213470000 R=1.700
23 H 5.072225873000 8.029210930000 12.244071240000 R=1.350
24 C 4.326170448000 10.034939530000 12.324385040000 R=1.700
25 H 3.295438087000 9.756249342000 12.061689730000 R=1.350
26 H 4.841697036000 10.354749190000 11.406801150000 R=1.350
27 H 4.283013019000 10.896964350000 13.007415970000 R=1.350
28 C 6.537829207000 9.202839691000 13.255974770000 R=1.700
29 H 6.622053124000 10.049366550000 13.954360110000 R=1.350
30 H 7.048676744000 9.484278304000 12.322714780000 R=1.350
31 H 7.070623003000 8.346171807000 13.694233140000 R=1.350
32 C 2.309748473000 5.334246846000 15.466797390000 R=1.700
33 H 1.852409991000 5.188063223000 14.474299420000 R=1.350
34 C 3.323656858000 4.196053915000 15.694821380000 R=1.700
35 H 4.083432594000 4.164951663000 14.903167430000 R=1.350
36 H 2.806441442000 3.224503272000 15.709074510000 R=1.350
37 H 3.833827971000 4.324916474000 16.662611070000 R=1.350
38 C 1.185905448000 5.253105859000 16.503293880000 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 58
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
58
39 H 1.571539190000 5.336161284000 17.531161310000 R=1.350
40 H 0.676556118600 4.285305972000 16.416924810000 R=1.350
41 H 0.433272056700 6.038300671000 16.340696130000 R=1.350
42 C 3.771540327000 5.286950321000 9.591391297000 R=1.700
43 C 4.010495710000 6.423650707000 8.784486774000 R=1.700
44 C 4.118372193000 6.233207415000 7.398651794000 R=1.700
45 H 4.302965987000 7.095672802000 6.756462872000 R=1.350
46 C 4.031457537000 4.962019555000 6.832553516000 R=1.700
47 H 4.142351586000 4.834999850000 5.755166611000 R=1.350
48 C 3.775955942000 3.858405650000 7.644712143000 R=1.700
49 H 3.672813732000 2.869820418000 7.194063883000 R=1.350
50 C 3.610802036000 4.004133831000 9.029873273000 R=1.700
51 C 4.253272773000 7.804408826000 9.378172581000 R=1.700
52 H 3.882918445000 7.795911306000 10.410965000000 R=1.350
53 C 3.487136278000 8.913974632000 8.647277228000 R=1.700
54 H 3.845150661000 9.052717479000 7.615617995000 R=1.350
55 H 3.620194338000 9.868941961000 9.176925922000 R=1.350
56 H 2.411829625000 8.689428522000 8.605076800000 R=1.350
57 C 5.764450982000 8.095848389000 9.437267058000 R=1.700
58 H 6.287847077000 7.330732270000 10.029295810000 R=1.350
59 H 5.951075359000 9.074289433000 9.904348386000 R=1.350
60 H 6.198000998000 8.108225720000 8.424844427000 R=1.350
61 C 3.257227252000 2.800450522000 9.889742803000 R=1.700
62 H 3.051245321000 3.176912744000 10.901548310000 R=1.350
63 C 4.419259906000 1.797279438000 9.985593131000 R=1.700
64 H 4.672029463000 1.394582250000 8.992298164000 R=1.350
65 H 4.145565741000 0.952682764800 10.635861580000 R=1.350
66 H 5.321525018000 2.269923307000 10.398328970000 R=1.350
67 C 1.981801121000 2.116130502000 9.370402146000 R=1.700
68 H 1.139847190000 2.821406110000 9.348201861000 R=1.350
69 H 1.710032179000 1.267530731000 10.014723130000 R=1.350
70 H 2.120875051000 1.726163630000 8.351630336000 R=1.350
71 C -2.810917490000 5.563505555000 10.960058600000 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 59
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
59
72 H -3.699549043000 5.046707027000 11.300551530000 R=1.350
73 C -2.582311894000 6.187093506000 9.776902286000 R=1.700
74 H -3.246435110000 6.308911194000 8.930287161000 R=1.350
75 C -1.699996212000 5.131189510000 13.103896240000 R=1.700
76 C -1.017183633000 3.931417125000 13.403583670000 R=1.700
77 C -1.190415388000 3.376692550000 14.678851650000 R=1.700
78 H -0.684233503700 2.445556703000 14.932348220000 R=1.350
79 C -2.004739823000 3.989235693000 15.631325350000 R=1.700
80 H -2.130674033000 3.535508095000 16.615126220000 R=1.350
81 C -2.629542563000 5.196902259000 15.333198930000 R=1.700
82 H -3.238320929000 5.689283040000 16.093028210000 R=1.350
83 C -2.481882921000 5.798625012000 14.073449960000 R=1.700
84 C -0.184686857200 3.210887006000 12.350159550000 R=1.700
85 H 0.270347796500 3.975227573000 11.702076190000 R=1.350
86 C 0.959863354500 2.384291229000 12.949908000000 R=1.700
87 H 1.600024780000 3.000685020000 13.595803880000 R=1.350
88 H 1.584023562000 1.970454301000 12.148203190000 R=1.350
89 H 0.587708231600 1.534272782000 13.540761440000 R=1.350
90 C -1.103750999000 2.338020777000 11.472217880000 R=1.700
91 H -0.525606269100 1.814595707000 10.698326560000 R=1.350
92 H -1.867648641000 2.952063900000 10.974400880000 R=1.350
93 H -1.615157825000 1.584187474000 12.091703840000 R=1.350
94 C -3.154394457000 7.139000745000 13.795741890000 R=1.700
95 H -2.682114429000 7.563438281000 12.897343090000 R=1.350
96 C -2.953655770000 8.131813229000 14.955088040000 R=1.700
97 H -3.555928389000 7.850194226000 15.831801180000 R=1.350
98 H -3.266163467000 9.139752712000 14.646173120000 R=1.350
99 H -1.901118901000 8.177823385000 15.265705220000 R=1.350
100 C -4.662349101000 6.977924896000 13.516901540000 R=1.700
101 H -4.852714203000 6.349393865000 12.638120650000 R=1.350
102 H -5.126626829000 7.960035927000 13.338674000000 R=1.350
103 H -5.162467202000 6.516393655000 14.382958830000 R=1.350
104 C -0.738060096900 7.378817131000 8.629087283000 R=1.700
NATURE CHEMISTRY | www.nature.com/naturechemistry 60
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
60
105 C -0.429776014300 6.644100541000 7.464287236000 R=1.700
106 C 0.102730064400 7.340058352000 6.368369463000 R=1.700
107 H 0.358899344000 6.792631895000 5.459927803000 R=1.350
108 C 0.314559094700 8.716457723000 6.424135775000 R=1.700
109 H 0.740521436300 9.238976638000 5.566504911000 R=1.350
110 C -0.020742499710 9.427259771000 7.577062919000 R=1.700
111 H 0.140870504800 10.505048560000 7.607958887000 R=1.350
112 C -0.557722252400 8.778872812000 8.698356894000 R=1.700
113 C -0.710438087400 5.149544369000 7.364426598000 R=1.700
114 H -0.887597069300 4.776865489000 8.383464812000 R=1.350
115 C -1.982515136000 4.889663649000 6.533465161000 R=1.700
116 H -2.853542912000 5.424522795000 6.935687732000 R=1.350
117 H -2.217035370000 3.814459412000 6.515664356000 R=1.350
118 H -1.834506260000 5.224831441000 5.494568618000 R=1.350
119 C 0.473211102200 4.365569393000 6.785927650000 R=1.700
120 H 0.656524803700 4.623196851000 5.731612525000 R=1.350
121 H 0.272666244500 3.284723866000 6.833089084000 R=1.350
122 H 1.391328847000 4.570388630000 7.347918183000 R=1.350
123 C -1.011087652000 9.575465038000 9.914489652000 R=1.700
124 H -0.990789553300 8.901446971000 10.778634400000 R=1.350
125 C -0.093293394580 10.758294020000 10.247198650000 R=1.700
126 H -0.147223596100 11.550103830000 9.484457729000 R=1.350
127 H 0.951093197100 10.427776640000 10.338585450000 R=1.350
128 H -0.392406987900 11.201063100000 11.208506580000 R=1.350
129 C -2.472863332000 10.028920980000 9.734820435000 R=1.700
130 H -2.819369729000 10.570525880000 10.628473890000 R=1.350
131 H -3.133364879000 9.163058244000 9.579524537000 R=1.350
132 H -2.568466938000 10.697785500000 8.864940887000 R=1.350
133 H -0.736520170300 9.295248215000 13.273949300000 R=1.350
134 H 1.613994817000 9.415291316000 14.260288370000 R=1.350
END
GUIBONDS
NATURE CHEMISTRY | www.nature.com/naturechemistry 61
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
61
1 1 7 3
2 1 8 3
3 1 2 3
4 3 9 1.0
5 3 13 1.0
6 3 7 1.0
7 4 11 1.0
8 4 7 1.0
9 4 42 1.0
10 5 71 1.0
11 5 75 1.0
12 5 8 1.0
13 6 73 1.0
14 6 8 1.0
15 6 104 1.0
16 9 10 1.0
17 9 11 2.0
18 11 12 1.0
19 13 14 1.5
20 13 21 1.5
21 14 15 1.5
22 14 22 1.0
23 15 16 1.0
24 15 17 1.5
25 17 18 1.0
26 17 19 1.5
27 19 20 1.0
28 19 21 1.5
29 21 32 1.0
30 22 23 1.0
31 22 24 1.0
32 22 28 1.0
33 24 27 1.0
34 24 26 1.0
35 24 25 1.0
36 28 31 1.0
37 28 30 1.0
38 28 29 1.0
39 32 33 1.0
40 32 38 1.0
41 32 34 1.0
42 34 36 1.0
43 34 37 1.0
44 34 35 1.0
45 38 41 1.0
46 38 39 1.0
47 38 40 1.0
48 42 43 1.5
49 42 50 1.5
50 43 44 1.5
51 43 51 1.0
52 44 45 1.0
53 44 46 1.5
54 46 47 1.0
55 46 48 1.5
56 48 49 1.0
57 48 50 1.5
58 50 61 1.0
59 51 52 1.0
60 51 57 1.0
61 51 53 1.0
62 53 56 1.0
63 53 54 1.0
64 53 55 1.0
65 57 60 1.0
66 57 59 1.0
67 57 58 1.0
68 61 62 1.0
69 61 67 1.0
70 61 63 1.0
71 63 64 1.0
72 63 65 1.0
73 63 66 1.0
74 67 68 1.0
75 67 70 1.0
76 67 69 1.0
77 71 72 1.0
78 71 73 2.0
79 73 74 1.0
80 75 83 1.5
81 75 76 1.5
82 76 77 1.5
83 76 84 1.0
84 77 78 1.0
85 77 79 1.5
86 79 80 1.0
87 79 81 1.5
88 81 82 1.0
89 81 83 1.5
90 83 94 1.0
91 84 85 1.0
92 84 86 1.0
93 84 90 1.0
94 86 87 1.0
95 86 88 1.0
96 86 89 1.0
97 90 92 1.0
98 90 91 1.0
NATURE CHEMISTRY | www.nature.com/naturechemistry 62
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
62
99 90 93 1.0
100 94 95 1.0
101 94 96 1.0
102 94 100 1.0
103 96 97 1.0
104 96 98 1.0
105 96 99 1.0
106 100 101 1.0
107 100 102 1.0
108 100 103 1.0
109 104 112 1.5
110 104 105 1.5
111 105 106 1.5
112 105 113 1.0
113 106 107 1.0
114 106 108 1.5
115 108 109 1.0
116 108 110 1.5
117 110 111 1.0
118 110 112 1.5
119 112 123 1.0
120 113 114 1.0
121 113 119 1.0
122 113 115 1.0
123 115 116 1.0
124 115 117 1.0
125 115 118 1.0
126 119 121 1.0
127 119 120 1.0
128 119 122 1.0
129 123 124 1.0
130 123 129 1.0
131 123 125 1.0
132 125 128 1.0
133 125 126 1.0
134 125 127 1.0
135 129 131 1.0
136 129 130 1.0
137 129 132 1.0
138 133 2 1.0
139 134 2 1.0
END
SOLVATION
Surf Esurf
Solvent name=Hexane cav0=0.0 cav1=0.0067639
Charged method=CONJ
C-Mat POT
SCF VAR ALL
CSMRSP
END
BASIS
type TZP
core Large
createoutput None
END
XC
GGA Becke88 Perdew86
NATURE CHEMISTRY | www.nature.com/naturechemistry 63
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
63
DISPERSION Grimme3
END
GEOMETRY
optim Delocalized
iterations 100
END
SAVE TAPE21 TAPE13
SCF
iterations 100
END
FULLSCF
BeckeGrid
Quality Good
End
NOPRINT LOGFILE
eor
---------------------------
#! /bin/sh
# ==============================
# Attempted optimization of [{(HCDippN)2B}2Ge(H)Ge(H) # ==============================
NATURE CHEMISTRY | www.nature.com/naturechemistry 64
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
64
"$ADFBIN/adf" <<eor
ATOMS
1 Ge 1.213370678000 7.110292610000 11.596694400000 R=2.033
2 Ge 0.579670929600 8.423687431000 13.545154340000 R=2.033
3 N 3.875691341000 6.243628185000 13.152219280000 R=1.608
4 N 3.886411940000 5.486483850000 10.995627680000 R=1.608
5 N -1.692494503000 5.715242020000 11.794463590000 R=1.608
6 N -1.269259796000 6.697441480000 9.777278963000 R=1.608
7 B 3.048494508000 6.158907313000 11.965686210000 R=1.792
8 B -0.642294459500 6.364330892000 11.035787050000 R=1.792
9 C 5.108095113000 5.632168022000 12.884856040000 R=1.700
10 H 5.889559202000 5.580130465000 13.634449060000 R=1.350
11 C 5.114300333000 5.179628017000 11.604697080000 R=1.700
12 H 5.900443198000 4.667239266000 11.062408610000 R=1.350
13 C 3.732648448000 7.089227272000 14.306165120000 R=1.700
14 C 4.317651495000 8.372556050000 14.265969970000 R=1.700
15 C 4.200124248000 9.187749111000 15.402715900000 R=1.700
16 H 4.641134417000 10.186250180000 15.393847640000 R=1.350
17 C 3.511744650000 8.748045753000 16.530400840000 R=1.700
18 H 3.422621014000 9.395682835000 17.403593180000 R=1.350
19 C 2.918019529000 7.483909721000 16.537895120000 R=1.700
20 H 2.362280217000 7.163569753000 17.418287010000 R=1.350
21 C 3.013010871000 6.629452123000 15.430466880000 R=1.700
22 C 5.030618950000 8.897779694000 13.025416270000 R=1.700
23 H 5.034331368000 8.098021913000 12.275079190000 R=1.350
24 C 4.279623955000 10.094309020000 12.415293340000 R=1.700
25 H 3.250537400000 9.815648332000 12.146449030000 R=1.350
26 H 4.792728834000 10.442896110000 11.506472280000 R=1.350
27 H 4.231004376000 10.937290010000 13.121521490000 R=1.350
28 C 6.499021531000 9.248838802000 13.317700180000 R=1.700
29 H 6.578720858000 10.072788580000 14.043335220000 R=1.350
30 H 7.006321645000 9.563619439000 12.393366360000 R=1.350
31 H 7.037631241000 8.381890581000 13.727518290000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 65
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
65
32 C 2.361750306000 5.252512356000 15.425145170000 R=1.700
33 H 1.917770826000 5.119397935000 14.424758970000 R=1.350
34 C 3.406531893000 4.138785170000 15.633606930000 R=1.700
35 H 4.175053130000 4.151649039000 14.850047330000 R=1.350
36 H 2.918950702000 3.151937221000 15.615907470000 R=1.350
37 H 3.901660537000 4.255995431000 16.610586150000 R=1.350
38 C 1.230734785000 5.113927897000 16.447276810000 R=1.700
39 H 1.603168544000 5.185219661000 17.480917030000 R=1.350
40 H 0.752082027800 4.133083906000 16.334240930000 R=1.350
41 H 0.455483795400 5.878918876000 16.293969470000 R=1.350
42 C 3.775509603000 5.360172362000 9.567266523000 R=1.700
43 C 3.964999107000 6.507880658000 8.761293409000 R=1.700
44 C 3.989377830000 6.332578940000 7.370010874000 R=1.700
45 H 4.123099200000 7.201178227000 6.724654284000 R=1.350
46 C 3.875400162000 5.065736789000 6.798073900000 R=1.700
47 H 3.917469770000 4.950281617000 5.714424889000 R=1.350
48 C 3.682226747000 3.950790654000 7.611367268000 R=1.700
49 H 3.566112354000 2.966080640000 7.155819019000 R=1.350
50 C 3.597905384000 4.080371711000 9.005708670000 R=1.700
51 C 4.240208096000 7.879241359000 9.367145434000 R=1.700
52 H 3.794213280000 7.898805701000 10.370754010000 R=1.350
53 C 3.608276207000 9.033379676000 8.580199761000 R=1.700
54 H 4.093226790000 9.178682968000 7.602591501000 R=1.350
55 H 3.720739657000 9.970457069000 9.145090350000 R=1.350
56 H 2.537451422000 8.858622644000 8.408747787000 R=1.350
57 C 5.758392664000 8.087708211000 9.533282184000 R=1.700
58 H 6.200658111000 7.303135766000 10.163771520000 R=1.350
59 H 5.963395714000 9.060596590000 10.004672600000 R=1.350
60 H 6.257957041000 8.069064074000 8.551598745000 R=1.350
61 C 3.318030341000 2.863135649000 9.875616291000 R=1.700
62 H 3.123855339000 3.231195690000 10.893154460000 R=1.350
63 C 4.529172239000 1.915867775000 9.937647281000 R=1.700
64 H 4.766645354000 1.521988377000 8.936984206000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 66
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
66
65 H 4.317668376000 1.061765344000 10.598866400000 R=1.350
66 H 5.421108740000 2.431830347000 10.319372170000 R=1.350
67 C 2.063392336000 2.115721013000 9.396426811000 R=1.700
68 H 1.190418461000 2.781768109000 9.388592953000 R=1.350
69 H 1.846216110000 1.263865445000 10.057066410000 R=1.350
70 H 2.192491582000 1.718809120000 8.379039723000 R=1.350
71 C -2.848442822000 5.665374499000 10.997950420000 R=1.700
72 H -3.756355236000 5.191627026000 11.349307800000 R=1.350
73 C -2.599087141000 6.256705857000 9.802901155000 R=1.700
74 H -3.262144227000 6.394259124000 8.957964751000 R=1.350
75 C -1.735533951000 5.176449167000 13.127248580000 R=1.700
76 C -1.055448176000 3.968729201000 13.406010130000 R=1.700
77 C -1.235791076000 3.388816371000 14.668454890000 R=1.700
78 H -0.732567966100 2.451838062000 14.905537380000 R=1.350
79 C -2.051166595000 3.984406238000 15.631185440000 R=1.700
80 H -2.179914022000 3.511620962000 16.605614170000 R=1.350
81 C -2.672169312000 5.198756892000 15.354639230000 R=1.700
82 H -3.283359647000 5.676801791000 16.121717890000 R=1.350
83 C -2.520487617000 5.824719738000 14.106946780000 R=1.700
84 C -0.210409110000 3.270952453000 12.346486150000 R=1.700
85 H 0.283112416800 4.050496566000 11.745970270000 R=1.350
86 C 0.897198664100 2.392561786000 12.942121190000 R=1.700
87 H 1.513460417000 2.956241050000 13.655855970000 R=1.350
88 H 1.553376651000 2.025899008000 12.142946100000 R=1.350
89 H 0.489703585800 1.510397610000 13.458373190000 R=1.350
90 C -1.117825960000 2.457106008000 11.402722840000 R=1.700
91 H -0.522297355900 1.944062984000 10.634841170000 R=1.350
92 H -1.844602305000 3.108551171000 10.897046670000 R=1.350
93 H -1.672995167000 1.696052322000 11.973804670000 R=1.350
94 C -3.194088997000 7.169701060000 13.854927270000 R=1.700
95 H -2.734992836000 7.603136994000 12.954306840000 R=1.350
96 C -2.971127898000 8.150297945000 15.020888440000 R=1.700
97 H -3.550555683000 7.855583015000 15.908732350000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 67
SUPPLEMENTARY INFORMATIONDOI: 10.1038/NCHEM.2597
67
98 H -3.297219833000 9.160194224000 14.732207850000 R=1.350
99 H -1.911701645000 8.199264273000 15.306278990000 R=1.350
100 C -4.706608111000 7.015712609000 13.599875560000 R=1.700
101 H -4.914852141000 6.372297583000 12.736044350000 R=1.350
102 H -5.165166418000 7.998392782000 13.410904970000 R=1.350
103 H -5.198850347000 6.573877380000 14.480537190000 R=1.350
104 C -0.711758290800 7.320865658000 8.609571918000 R=1.700
105 C -0.464920549200 6.527765472000 7.466985022000 R=1.700
106 C 0.083607123950 7.152415473000 6.337080609000 R=1.700
107 H 0.292817907600 6.558366574000 5.446034823000 R=1.350
108 C 0.367258268600 8.517345528000 6.335540011000 R=1.700
109 H 0.802358372500 8.984528298000 5.450972463000 R=1.350
110 C 0.091378339520 9.286633467000 7.466030950000 R=1.700
111 H 0.304957149200 10.355956740000 7.451402749000 R=1.350
112 C -0.455173878200 8.710343654000 8.622008435000 R=1.700
113 C -0.828594434300 5.047381314000 7.424839681000 R=1.700
114 H -1.013030685000 4.720888364000 8.458312506000 R=1.350
115 C -2.123768013000 4.830275244000 6.616994213000 R=1.700
116 H -2.959789955000 5.422970959000 7.012375244000 R=1.350
117 H -2.415807953000 3.769123437000 6.636239115000 R=1.350
118 H -1.971885138000 5.124275039000 5.566368168000 R=1.350
119 C 0.298978888000 4.175171575000 6.860314374000 R=1.700
120 H 0.486684942600 4.389042350000 5.796965842000 R=1.350
121 H 0.032187586990 3.110757410000 6.942147552000 R=1.350
122 H 1.234533782000 4.342169007000 7.405411353000 R=1.350
123 C -0.841832867500 9.582537991000 9.809201324000 R=1.700
124 H -0.907235440200 8.935561619000 10.691888890000 R=1.350
125 C 0.192167922900 10.671406710000 10.124794690000 R=1.700
126 H 0.240164129400 11.435403570000 9.333742207000 R=1.350
127 H 1.192768624000 10.235244880000 10.252715340000 R=1.350
128 H -0.076664509870 11.178698070000 11.063053180000 R=1.350
129 C -2.242632063000 10.184658430000 9.587435892000 R=1.700
130 H -2.549570564000 10.776139730000 10.463897860000 R=1.350
NATURE CHEMISTRY | www.nature.com/naturechemistry 68
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68
131 H -2.988257086000 9.391668229000 9.428327731000 R=1.350
132 H -2.248333151000 10.844992690000 8.705680831000 R=1.350
133 H 1.579848517000 9.377032822000 14.304750460000 R=1.350
134 H 1.289605645000 5.605271506000 11.035493260000 R=1.350
END
GUIBONDS
1 1 7 3
2 1 8 3
3 1 2 3
4 3 9 1.0
5 3 13 1.0
6 3 7 1.0
7 4 11 1.0
8 4 7 1.0
9 4 42 1.0
10 5 71 1.0
11 5 75 1.0
12 5 8 1.0
13 6 73 1.0
14 6 8 1.0
15 6 104 1.0
16 9 10 1.0
17 9 11 2.0
18 11 12 1.0
19 13 14 1.5
20 13 21 1.5
21 14 15 1.5
22 14 22 1.0
23 15 16 1.0
24 15 17 1.5
25 17 18 1.0
26 17 19 1.5
27 19 20 1.0
28 19 21 1.5
29 21 32 1.0
30 22 23 1.0
31 22 24 1.0
32 22 28 1.0
33 24 27 1.0
34 24 26 1.0
35 24 25 1.0
36 28 31 1.0
37 28 30 1.0
38 28 29 1.0
39 32 33 1.0
40 32 38 1.0
41 32 34 1.0
42 34 36 1.0
43 34 37 1.0
44 34 35 1.0
45 38 41 1.0
46 38 39 1.0
47 38 40 1.0
48 42 43 1.5
49 42 50 1.5
50 43 44 1.5
51 43 51 1.0
52 44 45 1.0
53 44 46 1.5
54 46 47 1.0
55 46 48 1.5
56 48 49 1.0
57 48 50 1.5
58 50 61 1.0
59 51 52 1.0
60 51 57 1.0
61 51 53 1.0
62 53 56 1.0
63 53 54 1.0
64 53 55 1.0
65 57 60 1.0
66 57 59 1.0
67 57 58 1.0
68 61 62 1.0
69 61 67 1.0
70 61 63 1.0
71 63 64 1.0
72 63 65 1.0
73 63 66 1.0
74 67 68 1.0
75 67 70 1.0
76 67 69 1.0
77 71 72 1.0
78 71 73 2.0
NATURE CHEMISTRY | www.nature.com/naturechemistry 69
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69
79 73 74 1.0
80 75 83 1.5
81 75 76 1.5
82 76 77 1.5
83 76 84 1.0
84 77 78 1.0
85 77 79 1.5
86 79 80 1.0
87 79 81 1.5
88 81 82 1.0
89 81 83 1.5
90 83 94 1.0
91 84 85 1.0
92 84 86 1.0
93 84 90 1.0
94 86 87 1.0
95 86 88 1.0
96 86 89 1.0
97 90 92 1.0
98 90 91 1.0
99 90 93 1.0
100 94 95 1.0
101 94 96 1.0
102 94 100 1.0
103 96 97 1.0
104 96 98 1.0
105 96 99 1.0
106 100 101 1.0
107 100 102 1.0
108 100 103 1.0
109 104 112 1.5
110 104 105 1.5
111 105 106 1.5
112 105 113 1.0
113 106 107 1.0
114 106 108 1.5
115 108 109 1.0
116 108 110 1.5
117 110 111 1.0
118 110 112 1.5
119 112 123 1.0
120 113 114 1.0
121 113 119 1.0
122 113 115 1.0
123 115 116 1.0
124 115 117 1.0
125 115 118 1.0
126 119 121 1.0
127 119 120 1.0
128 119 122 1.0
129 123 124 1.0
130 123 129 1.0
131 123 125 1.0
132 125 128 1.0
133 125 126 1.0
134 125 127 1.0
135 129 131 1.0
136 129 130 1.0
137 129 132 1.0
138 133 2 1.0
139 134 1 1.0
END
NATURE CHEMISTRY | www.nature.com/naturechemistry 70
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70
SOLVATION
Surf Esurf
Solvent name=Hexane cav0=0.0 cav1=0.0067639
Charged method=CONJ
C-Mat POT
SCF VAR ALL
CSMRSP
END
BASIS
type TZP
core Large
createoutput None
END
XC
GGA Becke88 Perdew86
DISPERSION Grimme3
END
GEOMETRY
optim Delocalized
iterations 150
END
SAVE TAPE21 TAPE13
SCF
iterations 150
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END
FULLSCF
BeckeGrid
Quality Good
End
NOPRINT LOGFILE
eor
-----------------------------------------------
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Supplementary Figure 21: Structure of Ge(-boryl)Ge(boryl) transition state describing 1,2 transfer of a single boryl ligand
Ge 1.364399 6.939009 11.189787
Ge 0.571936 8.259056 13.647021
N 3.681246 6.167101 13.439715
N 3.703004 5.000561 11.457259
N -0.989908 5.211904 13.172588
N -1.54381 6.666395 11.443579
B 2.885149 5.924211 12.243954
B -0.513466 6.494271 12.532604
C 4.870683 5.428364 13.337808
C 2.076038 2.707159 10.523988
C 4.88189 4.735833 12.16474
C -0.144747 1.477919 13.502815
C 3.58928 7.259705 14.374347
C 4.115897 8.517269 13.989754
C 4.086338 9.569035 14.914844
C 2.556513 1.249318 10.428328
C 3.512831 9.403512 16.172266
C -1.811863 8.144715 8.0221230
C 2.962836 8.173535 16.524166
C -2.390056 9.370073 12.18985
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C 2.99744 7.075726 15.647794
C 4.682126 8.763653 12.601636
C -2.261119 9.430225 8.3188460
C 4.074086 10.018105 11.956291
C 0.566777 2.817151 10.248864
C -2.662746 6.506768 15.203451
C -3.83957 9.059286 12.549103
C 6.219171 8.824874 12.620806
C -2.486168 7.695483 16.159321
C -2.124803 4.769692 12.507542
C -2.427578 9.816357 9.647712
C 2.429798 5.733838 16.085813
C -2.448235 5.625531 11.48751
C 3.542769 4.762271 16.527517
C -2.038937 10.842742 12.399841
C -0.890276 4.739206 14.547027
C -0.146936 3.579257 14.850121
C 1.406915 5.868987 17.216283
C -0.212874 3.065229 16.15441
C -2.136525 8.936031 10.701326
C -1.00425 3.666314 17.129181
C 3.622520 4.700207 10.044148
C 4.340969 5.509929 9.126187
C 4.261396 5.211309 7.758444
C -4.124234 6.017788 15.200993
C 3.494434 4.145244 7.293694
C -1.735978 4.80807 16.81282
C 2.798091 3.358057 8.204656
C -1.097421 5.808516 8.662724
C 2.849522 3.614375 9.584058
C 5.175661 6.704045 9.562985
C -1.712959 5.358316 15.522403
C 4.691515 8.00454 8.903420
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C 0.605528 2.793995 13.788534
C 0.113991 5.785944 7.717814
C 2.061857 2.506562 14.181781
C 6.672952 6.465854 9.302462
C -2.266771 5.006911 8.059054
C -1.687311 7.635586 10.379731
C -1.526997 7.220117 9.0364340
H 5.632812 5.461926 14.108003
H 2.263576 3.061394 11.545083
H 5.647238 4.073949 11.774824
H 0.384922 0.882593 12.745765
H -1.165679 1.665688 13.139504
H -0.217171 0.867981 14.416712
H 4.497985 10.539491 14.633642
H 3.632735 1.170132 10.64102
H 2.377349 0.834787 9.424362
H 2.01619 0.616499 11.147976
H 3.479691 10.236739 16.875259
H -1.687448 7.845986 6.980269
H 2.497825 8.062739 17.501993
H -1.75169 8.758324 12.796399
H 4.397943 7.90754 11.979414
H -2.488785 10.129049 7.51305
H 4.330543 10.927097 12.522009
H 2.978622 9.929496 11.912822
H 4.458019 10.141459 10.933421
H 0.224529 3.844537 10.431596
H -0.007468 2.142578 10.896764
H 0.333097 2.560595 9.2045600
H -2.431809 6.868268 14.194703
H -4.006729 9.320339 13.605458
H -4.061642 7.989576 12.420028
H -4.547206 9.635586 11.932186
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H 6.644135 7.906977 13.053394
H 6.573615 9.682218 13.215006
H 6.60905 8.934177 11.596952
H -1.44028 8.034179 16.167618
H -2.784197 7.437184 17.187241
H -3.11459 8.53700 15.830119
H -2.664944 3.891116 12.842885
H -2.793636 10.818464 9.873062
H 1.915895 5.295314 15.215044
H -3.264074 5.553845 10.778177
H 4.252969 4.551674 15.719443
H 3.100493 3.806534 16.847359
H 4.097863 5.184433 17.380365
H -1.010556 11.067874 12.080883
H -2.123777 11.064299 13.473559
H -2.718298 11.522739 11.864531
H 0.965199 4.888029 17.428153
H 0.590381 6.55349 16.947076
H 1.877775 6.225881 18.145288
H 0.347089 2.161655 16.399518
H -1.050789 3.245655 18.134053
H 4.805419 5.832673 7.044775
H -4.796553 6.835009 14.898585
H -4.428096 5.676338 16.203191
H -4.261935 5.184749 14.496793
H 3.442526 3.928012 6.226254
H -2.365642 5.26937 17.574965
H 2.19907 2.522169 7.839809
H -0.788623 5.307625 9.587816
H 5.049971 6.822613 10.644105
H 5.288121 8.855673 9.262721
H 3.636161 8.194472 9.148757
H 4.789449 7.965006 7.807862
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H 0.610877 3.399406 12.872853
H 0.953218 6.353048 8.145161
H -0.134181 6.203326 6.729675
H 0.455707 4.750038 7.572695
H 2.560155 1.922561 13.395289
H 2.122571 1.924159 15.113427
H 2.625119 3.437089 14.319316
H 7.01999 5.553331 9.80879
H 7.267553 7.313081 9.676901
H 6.874762 6.356101 8.225128
H -2.585654 5.446742 7.100933
H -3.140606 4.985637 8.725881
H -1.954019 3.968461 7.869944
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Supplementary Figure 22: Electron density surface for the HOMO-11 of 5 (E = -6.37 eV).
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5. TD-DFT
The electronic excitations of 5 were calculated using all-electron triple-zeta polarization basis set in a simulated hexane solvent environment. The calculation was performed at the spin-orbit coupled level, without symmetry restrictions and employing the noncollinear and Tamm-Dancoff approximations.
Supplementary Figure 23: Calculated UV/Vis spectrum for 5.
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Supplementary Table 2: Assignment of key bands in the calculated UV/Vis spectrum of 5. All MOs belong to the a1/2 irreducible representation. The HOMO is MO 243.
Energy/eV (nm)
f Transition MOs
Initial MO Final MO
2.68 (461)
0.20 94% 243→245
Energy/eV (nm)
f Transition MOs
Initial MO Final MO
2.998 (413)
0.0033 80% 242→245
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4. References for supporting information
1. Pangborn, A. B., Giardello, M. A., Grubbs, R. H., Rosen, R. K. & Timmers, F. J., Safe and convenient procedure for solvent purification. Organometallics 15, 1518-1520 (1996).
2. Ryan, S. J., Schimler, S. D., Bland, D. C. & Sanford, M S. Acyl azolium fluorides for room temperature nucleophilic aromatic fluorination of chloro- and nitroarenes. Org. Lett. 17, 1866-1869 (2015).
3. Segawa, Y., Yamashita, M. & Nozaki, K. Boryllithium: isolation, characterization, and reactivity as a boryl anion. Science 314, 113-115 (2006).
4. Rupar, P. A., Staroverov, V. N., Ragogna, P. J. & Baines, K. M. A germanium(II)-centered dication. J. Am. Chem. Soc. 129, 15138-15139 (2007).
5. Green, S. P., Jones, C. & Stasch, A. Stable magnesium(I) compounds with Mg-Mg bonds. Science 318, 1754-1757 (2007).
6. Viculis, L. M., Mack, J. J., Mayer, O. M., Hahn, H. T. & Kaner, R. B. Intercalation and exfoliation routes to graphite nanoplatelets. J. Mater. Chem. 15, 974-978 (2005).
7. Sheldrick, G. M. SHELXT – Integrated space-group and crystal-structure determination. Acta Cryst. A71, 3-8 (2015).
8. Sheldrick, G. M. A short history of SHELX. Acta Cryst. A64, 112-122 (2008). 9. Spek, A. L. Structure validation in chemical crystallography. Acta Cryst. D65, 148-155
(2009). 10. Becke, A. D. Density-functional exchange-energy approximation with correct asymptotic
behavior. Phys. Rev. A 38, 3098-3100 (1988). 11. Perdew, J. P. Density-functional approximation for the correlation energy of the
inhomogeneous electron gas. Phys. Rev. B 33, 8822-8824 (1986). 12. Snijders, J. G., Vernooijs, P. & Baerends, E. J. Roothaan-Hartree-Fock-Slater atomic wave
functions: single-zeta, double-zeta, and extended Slater-type basis sets for 87Fr-103Lr. Atomic Data and Nuclear Data Tables 26, 483-509 (1982).