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Mader: Biology 8 th Ed. Viruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 th Ed. Outline Viruses Structure Classification Reproduction Prokaryotes Structure Reproduction Nutrition Bacteria Archaea Mader: Biology 8 th Ed. The Viruses Viruses are noncellular and thus cannot be classified with cellular organisms. Generally smaller than 200 nm in diameter. Each type has at least two parts. ! Capsid: Outer layer composed of protein subunits. ! Nucleic acid core: DNA or RNA. Mader: Biology 8 th Ed. The Viruses

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Page 1: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Mader: Biology 8th Ed.

Viruses, Bacteria, and Archaea

Chapter 21

Mader: Biology 8th Ed.

Outline

• Viruses– Structure– Classification– Reproduction

• Prokaryotes– Structure– Reproduction– Nutrition

• Bacteria• Archaea

Mader: Biology 8th Ed.

The Viruses

• Viruses are noncellular and thus cannot be classified with cellular organisms.

• Generally smaller than 200 nm in diameter.

– Each type has at least two parts.

!Capsid: Outer layer composed of protein subunits.

!Nucleic acid core: DNA or RNA.

Mader: Biology 8th Ed.

The Viruses

Page 2: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Fig. 21.1baFig. 21.1bb

Mader: Biology 8th Ed.

The Viruses

• Classification is based on:

– Type of nucleic acid.

– Size and shape.

– Presence / absence of outer envelope.

Mader: Biology 8th Ed.

The Viruses

Page 3: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Fig. 21.1c Fig. 21.1d

Fig. 21.1p363ba

Mader: Biology 8th Ed.

Parasitic Nature

• Viruses are obligate inrtracellular parasites (cannot reproduce outside a living cell).

– Can infect a wide variety of cells, but are very specific.

!Bacteriophages - Infect bacterial cells.

Page 4: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Mader: Biology 8th Ed.

Viral Reproduction

• Viruses gain entry into host because portions of capsid adhere to a specific receptor on the host cell’s outer surface.

– Viral nucleic acid enters the cell and once inside, the nucleic acid codes for the protein units inside the capsid.

!Virus takes over metabolic machinery of the host cell.

Mader: Biology 8th Ed.

Lytic Cycle

• Lytic cycle may be divided into five stages:

– Attachment

– Penetration

– Biosynthesis

– Maturation

– Release

Mader: Biology 8th Ed.

Virus Lytic Cycle

15

Fig. 21.3

Page 5: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Mader: Biology 8th Ed.

Lysogenic Cycle

• Phage becomes a prophage that is integrated into the host genome.

– Becomes latent, and later may reenter the lytic cycle.

Fig. 21.3a

Mader: Biology 8th Ed.

Reproduction of Animal Viruses

• After animal viruses enter the host cell, uncoating releases viral DNA or RNA and reproduction occurs.

– If viral release occurs by budding, the viral particle acquires a membranous envelope.

– Retroviruses

!Contain reverse transcriptase which carries out RNA " cDNA transcription.

Mader: Biology 8th Ed.

Reproduction of HIV-1

Page 6: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Mader: Biology 8th Ed.

Viral Infections

• Viruses are best known for causing infectious diseases in plants and animals.

– Herpes, HIV, cancer

! Viruses lack enzymes; thus, antibiotics have no effect.

– Many crop diseases have been attributed to viroids (naked strands of RNA).

– Some human and other animal diseases have been attributed to prions (protein molecules).

! Mad cow disease

TA p362

Mader: Biology 8th Ed.

The Prokaryotes

• The prokaryotes include bacteria and archaea, which are fully functioning cells.

– A single spoonful of earth can contain 1010 prokaryotes.

– Range in size from 1-10!m in length and .7-1.5!m in width.

TA p368

Page 7: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Fig. 21.5

Mader: Biology 8th Ed.

Prokaryote Structure

– Lack a eukaryotic nucleus.

– Have outer cell wall containing peptidoglycan.

– Some move by means of flagella.

– Lack membranous organelles.

– Contain nucleoid.

– May have accessory ring of DNA (plasmid).

Mader: Biology 8th Ed.

Flagella

Mader: Biology 8th Ed.

Bacterial Diversity

28

Page 8: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Mader: Biology 8th Ed.

Reproduction in Prokaryotes

• Prokaryotes reproduce asexually by means of binary fission.

– Conjugation occurs between bacteria when the donor cell passes DNA to recipient cell by way of sex pilus.

Mader: Biology 8th Ed.

Binary Fission

TA p369

Mader: Biology 8th Ed.

Reproduction in Prokaryotes

• Transformation occurs when bacterium picks up free pieces of DNA from other prokaryotes.

• Transduction occurs when bacteriophages carry portions of bacterial DNA from one cell to another.

• When faced with unfavorable conditions, some bacteria form endospores.

Page 9: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Fig. 21.9

Mader: Biology 8th Ed.

Prokaryotic Nutrition

• Obligate anaerobes are unable to grow in the presence of free oxygen.

• Facultative anaerobes are able to grow in either the presence or absence of gaseous oxygen.

Mader: Biology 8th Ed.

Autotrophic Prokaryotes

• Photoautotrophs use solar energy to reduce carbon dioxide to organic compounds.

– Photosynthetic

• Chemoautotrophs oxidize inorganic compounds to obtain the necessary energy to reduce CO2 to an organic compound.

– Chemosynthetic

Mader: Biology 8th Ed.

Heterotrophic Prokaryotes

• Most prokaryotes are chemotrophs that take in organic nutrients.

– Aerobic saprotrophs decompose most large organic molecules to smaller molecules.

• May be free-living or symbiotic.

– Nitrogen fixation

– Commensalism

Page 10: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Mader: Biology 8th Ed.

The Bacteria

• Groups of bacteria are commonly differentiated from one another using the Gram stain procedure.

– Gram-positive bacteria retain dye and appear purple.

– Gram-negative bacteria do not retain dye and appear pink.

Mader: Biology 8th Ed.

The Bacteria

• Bacteria can also be classified in terms of their three basic shapes.

– Spiral (spirilli), Rod (bacilli), and Round (cocci).

Mader: Biology 8th Ed.

Cyanobacteria

• Cyanobacteria are Gram-negative bacteria that photosynthesize.

– Believed to be responsible for introducing oxygen into the primitive atmosphere.

!Lack visible means of locomotion.

!Can live in extreme environments.

!In association with fungi, form lichens.

Mader: Biology 8th Ed.

Cyanobacteria

Page 11: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Fig. 21.12c

Mader: Biology 8th Ed.

The Archaea

• Archaea were considered bacteria until Carl Woese discovered their rRNA has a different sequence of bases than rRNA of bacteria.

– Eukarya are believed to be more closely related to archaea than to bacteria.

Mader: Biology 8th Ed.

Archaea Structure and Function

• Plasma membranes of archaea contain unusual lipids that allow them to function at high temperatures.

• Some are methanogenic.

• Most are chemoautotrophs.

– None are photosynthetic.

• Sometimes mutualistic or commensalistic, but none are parasitic.

Mader: Biology 8th Ed.

Types of Archaea

• Methanogens– Found in anaerobic environments.

!Produce methane from hydrogen gas and carbon dioxide.

• Halophiles– Require high salt concentrations for

growth.• Thermoacidophiles

– Reduce sulfides and survive best at temperatures above 80oC.

Page 12: Viruses, Bacteria, and Archaea Outline Chapter 21 ReproductionViruses, Bacteria, and Archaea Chapter 21 Mader: Biology 8 Ed. ... • Viruses gain entry into host because portions of

Mader: Biology 8th Ed.

Review

• Viruses– Structure– Classification– Reproduction

• Prokaryotes– Structure– Reproduction– Nutrition

• Bacteria• Archaea

Mader: Biology 8th Ed.