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GLOBAL BIODIVERSITY INFORMATION FACILITY Cataloging and using Taxonomic Data The Global Names Architecture David Remsen Senior Programme Officer, ECAT Asian Regional Meeting and Biodiversity Informatics Workshop 16-19 Nov 2009

Cataloging Taxonomic Data

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Basic overview of the Global Names Architecture and Darwin Core data standards presented to the Asian Regional Biodiversity Workshop in Bangkok, Thailand (Nov 2009).

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Page 1: Cataloging Taxonomic Data

GLOBALBIODIVERSITYGLOBALBIODIVERSITYINFORMATIONFACILITY Cataloging and using

Taxonomic Data

The Global Names Architecture

David RemsenSenior Programme Officer, ECAT

Asian Regional Meeting and Biodiversity Informatics

Workshop 16-19 Nov 2009

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Enable access to information about species

Enable access to information about species

Scientific names label that information

Scientific names label that information

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We use names to retrieve species information

We use names to retrieve species information

190M records – 5M distinct “taxon” names

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Names make poor identifiers

Names make poor identifiers

Information science & authority files address this.

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…even when properly spelled

…even when properly spelled

Information science & authority files address this.

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Nomenclatural Databases

Nomenclatural Databases

Provide original orthography and tie names to their originating publications

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Taxonomic Catalogues

Taxonomic Catalogues

Name of Taxon

Classification

Taxonomic Synonyms

Circumscription

Taxonomic Status

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Terminology

Terminology

Catalogues Monographs Regional Flora/Fauna Primary Sources

Inventories/Species Lists Secondary Sources

Nomenclators No Taxonomy at all

http://code.google.com/p/gbif-ecat/wiki/ChecklistDefinition

Scope Taxonomic Regional Thematic

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Global Names Architecture Idea

Global Names Architecture Idea

Mobilise Develop global taxonomic infrastructure

National, Regional, Global, Thematic

Index Create a Global Library of Taxonomic Resources

Link Create a single authoritative “dictionary” of

names Use / them

Develop tools and services that use these resources to facilitate integration and make life easier.

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Dynamic Index of Checklists

Dynamic Index of Checklists

2010 Q1 Release

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Build Name Dictionary Services

Enables Taxonomic Catalogues to be used to improve data quality in collections

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Build Taxonomic Name Services

Save Time Improve

Accuracy Organise

species data Automate

manual tasks

Unorganised/out-of-date Organised/Up-to-Date

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Create new checklists

New Derived ProductsNew Processes/Technologies

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Use species lists to filter data retrieval

Applied to data access and integration

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Support different or preferred taxonomic views

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Enable communities to have your data their way

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Questions

Questions

Can you benefit from these sorts of services?

Do you want a national Checklist Catalogue?

Should GBIFS focus on providing software for making Checklist Catalogues or services for using them?