References Aertsen,J.A.,etal.
(1998).Transzendental,Transzendentalphilosophie.
HistorischesWrterbuchderPhilosophie,Vol.10,1358-1465.Basel: Schwabe
Verlag. Allen, R. (2005). The Mereology of Events. Sorites, 16,
23-37.
Angelelli,I.(1967).StudiesonGottlobFregeandTraditionalPhilosophy.
Dordrecht: Reidel. Anscombe, E. (1957). Intention. Oxford: Basil
Blackwell.
AnselmofCanterbury(1938-1961).Operaomniaadfidescodicumrecensuit.
(F. S. Schmitt, Ed.). Edinburgh: Thomas Nelson & Sons.
Aquinas,T.(1964).InduodecimlibrosMetaphysicorumAristotelisexposition.
(M.-R. Cathala & R. M. Spiazzi, Eds.). Turin/Rom: Marietti.
Aquinas,T.(1965).InoctolibrosPhysicorumAristotelisexpositio.(M.
Maggilo, Ed.). Rome: Marietti.
Aristotle(1936).AristotlesPhysics.(W.D.Ross,Ed.).Oxford:Oxford
University
Press.Aristotle(1958).AristotlesMetaphysics.(W.D.Ross,Ed.).Oxford:Oxford
University Press.
Aristotle(1984).Categories.TheCompleteWorksofAristotle(Revised
Translation, J. Barnes, Ed.). Princeton: Princeton University
Press.
Aristotle(1984a).Metaphysics.TheCompleteWorksofAristotle(Revised
Translation, J. Barnes, Ed.). Princeton: Princeton University
Press.
Aristotle(1984b).Rhetorics.TheCompleteWorksofAristotle(Revised
Translation, J. Barnes, Ed.). Princeton: Princeton University
Press. Aristotle (2001). On The Parts of Animals I-IV. (J. G.
Lennox, Trans.). Oxford: Clarendon Press. Armstrong, D. M. (1978).
Universals and Scientific Realism. Vol. I: Nominalism and Realism.
Cambridge: Cambridge University Press.Armstrong, D. M. (1978b).
Universals and Scientific Realism. Vol. II: A Theory of Universals.
Cambridge: Cambridge University Press.
Armstrong,D.M.(1997).AWorldofStatesofAffairs.Cambridge:Cambridge
University Press. Asplund, J. (1968). Sociala egenskapsrymder.
Uppsala: Argos.
Baader,F.,etal.(Eds.).(2003).TheDescriptionLogicHandbook.Cambridge:
Cambridge University Press. Unauthenticated |
79.112.227.113Download Date | 7/3/14 7:55 PM Baier, A. C. (2003).
Ways and Means. Canadian Journal of Philosophy, 1, 275-293.
Barker,R.G.(1968).EcologicalPsychology:ConceptsandMethodsfor
Studying the Environment of Human Behavior. Stanford: Stanford
University Press. Beard, K. (1988). Multiple Representations from a
Detailed Database: A Scheme
forAutomatedGeneralization.(Ph.D.Thesis,UniversityofWisconsin,
Madison).
Berg,J.(1983).AristotlesTheoryofDefinition.ATTIdelConvegno
Internazionale di Storia della Logica 1982 (pp. 19-30). Bologna:
CLUEB.Bernauer,J.(1994).Subsumptionprinciplesunderlyingmedicalconcept
systemsandtheirformalreconstructions.ProceedingsoftheAnnual
SymposiumonComputerApplicationsinMedicalCare(pp.140-144).
Washington: Heinley and Belfus.
BFO:BasicFormalOntology(BFO).RetrievedJanuary16,2008from
http://www.ifomis.uni-Saarland.de/bfo/.Bibel,W.,Schneeberger,J.&Elver,E.(1990).RepresentationofKnowledge.
KnowledgeEngineeringVol.I:Fundamentals(pp.1-27).NewYork:
McGraw-Hill.
Bittner,T.(1997).AQualitativeCoordinateLanguageofLocationofFigures
within the Ground. In S. C. Hirtle & A. U. Frank (Eds.) Spatial
Information
Theory:ATheoreticalBasisforGIS,InternationalConferenceCOSIT97 (pp.
223-240). Berlin: Springer.
Bittner,T.&Smith,B.(2001).GranularPartitions,Vagueness,and
Approximation.InProceedingsoftheInternationalConferenceonFormal
Ontology and Information Systems - Volume 2001 (pp. 309-321). New
York: ACM Press. Bittner, T. & Smith, B. (2003). A Theory of
Granular Partitions. In M. Duckham,
M.F.Goodchild&M.F.Worboys(Eds.),FoundationsofGeographic
Information Science (pp. 117-151). London: Taylor & Francis.
Bittner, T.&Stell,J.G.(1998). ABoundary-Sensitive
ApproachtoQualitative Location. Annals of Mathematics and
Artificial Intelligence, 24, 93-114.
Bodenreider,O.,Smith,B.&Burgun,A.(2004).TheOntology-epistemology
Divide: ACaseStudyinMedicalTerminology.InProceedingsoftheThird
International Conference on Formal Ontology in Information Systems
(FOIS 2004) (pp. 185-195). Amsterdam: IOS Press. 312Unauthenticated
| 79.112.227.113Download Date | 7/3/14 7:55 PM Bodenreider, O.,
Smith, B. & Burgun, A. (2004a). Investigating Subsumption in
DL-basedTerminologies:ACaseStudyinSNOMEDCT.InU.Hahn,S. Schulz &
R. Cornet (Eds.), Proceedings of the First International Workshop
onFormalBiomedicalKnowledgeRepresentation(KR-MED2004). Retrieved
from http://CEUR-WS.org/Vol-102/.
Bonitz,H.(1967).berdieKategoriendesAristoteles.Darmstadt:Wissen-schaftliche
Buchgesellschaft.Bonnet, C. (1766). The Contemplation of Nature.
London: T. Longman.
Borges,J.L.(1981).TheAnalyticalLanguageofJohnWilkins.InE.R.
Monegal&A.Reid(Eds.),Borges:AReader(pp.141-143).NewYork:
Dutton.
Brachman,R.(1979).OntheEpistemologicalStatusofSemanticNetworks.In
N.Findler(Ed.),AssociativeNetworks:RepresentationandUseof Knowledge
by Computers (pp. 3-50). New York: Academic Press.
Brentano,F.(1862).VondermannigfachenBedeutungdesSeiendennach
Aristoteles. Freiburg: Herder.Bucher, T. (1998). Einfhrung in die
angewandte Logik. Berlin: De
Gruyter.Buck,R.C.&Hull,D.L.(1966).TheLogicalStructureoftheLinnaean
Hierarchy. Systematic Zoology, 15 (2), 97-111. Bunge, W. (1966).
Theoretical Geography. Sweden: Lund. Campbell, K. (1990). Abstract
Particulars. Oxford:
Blackwell.Campbell,K.,Oliver,D.Spackman,K.&Shortliffe,E.(1998).Representing
Thoughts, Words, and Things in the UMLS. Journal of the American
Medical Informatics Association, 5 (5), 421-431.
Caplan,A.L.(1981).BacktoClass:ANoteontheOntologyofSpecies.
Philosophy of Science, 48, 130-140. Carnap, R. (1934). The Logical
Syntax of Language. London: Routledge.Carroll, L. (1965). The Works
of Lewis Carroll. London: Paul Hamlyn. Casati,R.&Varzi,
A.C.(1994).HolesandOtherSuperfacilities.Cambridge, MA: MIT Press.
Casati,R.&Varzi,A.C.(1995).TheStructureofSpatialLocation.
Philosophical Studies, 82, 205-239.
Casati,R.&Varzi,A.C.(1999).PartsandPlaces:TheStructuresofSpatial
Representation. Cambridge, MA: MIT Press. Ceusters W.(2006).
TowardsaRealism-BasedMetricforQuality Assurancein
OntologyMatching.InB.Bennett&C.Fellbaum(Eds.),FormalOntology in
Information Systems: Proceedings of the Fourth International
Conference (FOIS 2006) (pp. 321-332). Amsterdam: IOS
Press.313Unauthenticated | 79.112.227.113Download Date | 7/3/14
7:55 PM Ceusters, W.,Elkin,P.&Smith,B.(2006).Referent Tracking:
TheProblemof
NegativeFindings.InProceedingsofMedicalInformaticsEurope,38,741-746.
Ceusters,W.&Smith,B.(2005).TrackingReferentsinElectronicHealth
Records. In Proceedings of Medical Informatics Europe, 29, 71-76.
Ceusters, W. & Smith, B. (2006). A Realism-Based Approach to
the Evolution of
BiomedicalOntologies.InProceedingsoftheAnnualAMIASymposium,
Washington, DC (pp. 121-125). Ceusters, W. & Smith, B. (2006a).
Strategies for Referent Tracking in Electronic Health Records. In
Journal of Biomedical Informatics, 39 (3), 362-378.
Ceusters,W.&Smith,B.(2007).ReferentTrackinganditsApplications.In
ProceedingsoftheWWW2007Workshopi3:Identity,Identifiers,
Identification. http://ceur-ws.org/Vol-249/submission_105.pdf.
Ceusters,W.,Smith,B.,Kumar, A.&Dhaen,C.(2004).MistakesinMedical
Ontologies: Where Do They Come From and How Can They Be Detected?
In D.M.Pisanelli(Ed.),StudiesinHealthTechnologyandInformatics:
Ontologies in Medicine (pp. 145-164). Amsterdam: IOS Press.
Ceusters, W.,Smith,B.&Goldberg,L.(2005). A Terminological
Analysisand
OntologicalAnalysisoftheNCIThesaurus.InMethodsofInformationin
Medicine, 44, 498-507. Ceusters, W., Spackman, K. A. & Smith,
B. Would SNOMED CT benefit from
Realism-BasedOntologyEvolution?InProceedingsoftheAmerican Medical
Informatics Association 2007 Annual Symposium (pp.
105-109).Charlton, W. (1972). Aristotle and the Principle of
Individuation. Phronesis, 17, 239-249. Chrisman, N. (1982). Models
of Spatial Analysis Based on Error in Categorical Maps. (Ph.D.
Thesis. University of Bristol, England).
Cimino,J.J.(1998).DesiderataforControlledMedicalVocabulariesinthe
Twenty-firstCentury.MethodsofInformationinMedicine,37(4-5),394-403.
Coady,C.(1992).Testimony:APhilosophicalStudy.NewYork:Oxford
University Press.
Cohn,A.G.&Mark,D.M.(Eds.).(2005).SpatialInformationTheory.In
ProceedingsofCOSIT2005(LectureNotesinComputerScience).Berlin:
Springer.Comrie, B. (1976). Aspect. Cambridge: Cambridge University
Press. Cuvier, G. (1827). The Animal Kingdom, Arranged after Its
Conformity with Its Organization. London: Whitacker.
314Unauthenticated | 79.112.227.113Download Date | 7/3/14 7:55 PM
Cyc:OpenCyc.(n.d.).OpensourceversionoftheCyctechnology.Retrieved
August 8, 2006 from http://www.cyc.com/cyc/opencyc/overview.
CycUpperOntology(n.d.).RetreievedAugust8,2006from
http//www.cyc.com/cyccdoc/upperont-diagram. html. Davidson, D.
(1980). The Logical Form of Action Sentences. Essays on Actions and
Events (pp. 105-122). Oxford: Clarendon Press. Defense Mapping
Agency (1980). Production Specifications for 1: 50,000 Scale
TopographicMapsofForeignAreas.Washington,DC:DefenseMapping Agency.
Degen,W.,Heller,B.,Herre,H.&Smith,B.(2001).GOL:Towardsan
AxiomatizedUpper-LevelOntology.InC.Welty,&B.Smith(Eds.)
ProceedingsoftheInternationalConferenceonFormalOntologyand
Information Systems - Volume 2001 (pp. 34-46). New York: ACM Press.
Dowty,D.R.(1991).WordMeaningandMontagueGrammar.Dordrecht: Kluwer
Academic Publishers.
Dugas,M.&Schmidt,K.(2003).MedizinischeInformatikundBioinformatik:
Ein Kompendium fr Studium und Praxis. Berlin: Springer.
Ebert,T.(1985).GattungenderPrdikateundGattungendesSeiendenbei
Aristoteles.ZumVerhltnisvonKat.4undTop.I9.ArchivfrGeschichte der
Philosophie, 67, 113-138. Edelman, S. (1998). Representation is
Representation of Similarities. Behavioral and Brain Sciences, 21,
449-498.
Ereshefky,M.Species.StanfordEncyclopediaofPhilosophy.Retrieved
August 15, 2002 from http://plato. stanford.edu/entries/species/.
Erwig, M. & Schneider, M. (1999). The Honeycomb Model of
Spatio-Temporal
Partitions.InM.Bohlen,C.Jensen&M.Scholl(Eds.)International
WorkshoponSpatio-TemporalDatabaseManagement(pp.39-59).Berlin:
Springer.Feibleman, J. K. (1974). Professor Quine and Real Classes.
Notre Dame Journal of Formal Logic, 15, 207-224.
Fellbaum,C.(Ed.).(1998).WordNet:AnElectronicLexicalDatabase.
Cambridge, MA: MIT Press. Foucault, M. (1970). The Order of Things.
London: Tavistock Publications.
FoundationalModelofAnatomy(FMA).(n.d.).RetrievedJanuary16,2008 from
http://sig.biostr.washington.edu/projects/fm/.Fragoso,G.,etal.(2004).OverviewandUtilizationoftheNCIThesaurus.
Comparative and Functional Genomics, 5, 648-654. 315Unauthenticated
| 79.112.227.113Download Date | 7/3/14 7:55 PM Frank,
A.,McGranaghan,M.&Volta,G.(1997).FormalizationofFamiliesof
CategoricalCoverages.InternationalJournalofGeographicInformation
Science, 11, 214-231.
Franklin,J.(2002).StovesDiscoveryoftheWorstArgumentintheWorld.
Philosophy, 77, 615-624. Frege, G. (1892). Begriff und Gegenstand.
Vierteljahrschrift fur wissenschaftliche Philosophie, 16, 192-205.
Frege,G.(1980).TheFoundationsofArithmetic:ALogico-Mathematical
EnquiryintotheConceptofNumber.(J.L.Austin,Trans.).Oxford:
Blackwell.(Originalworkpublishedin1884.GrundlagenderArithmetik.
Breslau: Koebner.)
Galton,A.(1984).TheLogicofAspect:AnAxiomaticApproach.Oxford:
Clarendon Press. Galton, A. (1999). The Mereotopology of Discrete
Space. In C. Freska & D. M.
Mark(Eds.),SpatialInformationTheory:CognitiveandComputational
FoundationsofGeographicScience(LectureNotesinComputerScience 1661)
(pp. 251-266). Berlin: Springer. Grdenfors, P. (Ed). (2003).Belief
Revision. Cambridge: Cambridge University Press. Gaus, W. (2003).
Dokumentations- und Ordnungslehre: Theorie und Praxis des
Information Retrieval (4th ed.). Berlin: Springer.
Gelman,S.A.&Wellman,H.M.(1991).InsidesandEssences:Early
Understandings of the Non-obvious. Cognition, 38, 213-244. Gene
Ontology Anotation Tool (GOAT). (n.d.). Retrieved January 28, 2008
from
http://goat.man.ac.uk/.GeneOntologyConsortium.(2000).TheGeneOntology:Toolforthe
Unification of Biology. Nature Genetics, 25, 25-29.
GeneOntologyConsortium.(n.d.).RetrievedJanuary16,2008from
http://www.geneontology.org.Genesereth,M.&Nilsson,L.(1987).LogicalFoundationsofArtificial
Intelligence. Los Altos, CA: Morgan
Kaufmann.Ghiselin,M.(1974).ARadicalSolutiontotheSpeciesProblem.Systematic
Zoology, 23, 536-544.
Ghiselin,M.(1997).MetaphysicsandtheOriginofSpecies. Albany,NY:State
University of New York Press.
Gibson,J.J.(1979).TheEcologicalApproachtoVisualPerception.Boston:
Houghton Mifflin. 316Unauthenticated | 79.112.227.113Download Date
| 7/3/14 7:55 PM Gill, K. (1993). On the Metaphysical Distinction
between Processes and Events. Canadian Journal of Philosophy, 23,
365-384. Goclenius, R. (1613). Lexicon Philosophicum. Frankfurt.
Goldman,A.I.(1970).ATheoryofHumanAction.EngelwoodCliffs,NJ:
Prentice Hall. Grenon, P. (2003). Tucking RCC in Cyc's Ontological
Bed. In G. Gottlob & T. Walsh (Eds.), Proceedings of the 18th
International Joint Conference in Artificial Intelligence (pp.
894-899). San Francisco: Morgan Kaufmann.
Grenon,P.(2003a).Spatio-temporalityinBasicFormalOntology,SNAPand
SPAN,UpperLevelOntology,andFrameworkforFormalization,PARTI. IFOMIS
Reports. ISSN 1611-4019. Saarbrucken: Saarland University.
Grenon,P.(2006).
TemporalQualificationandChangewithFirst-OrderBinary
Predicates.InB.Bennett&C.Fellbaum(Eds.),FormalOntologyand
InformationSystems.ProceedingsoftheFourthInternationalConference
(pp. 155-166). Amsterdam: IOS Press.
Grenon,P.&Smith,B.(2004).SNAPandSPAN:TowardsDynamicSpatial
Ontology. Spatial Cognition and Computation, 4, 69-103.
Grenon,P.,Smith,B.&Goldberg,L.(2004).BiodynamicOntology:
Applying BFOintheBiomedicalDomain.InD.M.Pisanelli(Ed.),Ontologiesin
Medicine:ProceedingsoftheWorkshoponMedicalOntologies,Rome, October
2003 (pp. 20-38). Amsterdam: IOS Press.
Griffith,P.E.(1996).Darwinism,processstructuralism,andnaturalkinds.
Philosophy of Science, 61, 206-227.
Guarino,N.(2001).ReviewofSowasKnowledgeRepresentation.AI Magazine,
2(3), 123-124.
Guarino,N.&Welty,C.(2000).OntologicalAnalysisofTaxonomic
Relationships.InA.Laender&V.Storey(Eds.)ProceedingsofER-2000:
The19thInternationalConferenceonConceptualModeling(pp.210-224).
Berlin: Springer. Hennig, W. (1966). Phylogenetic Systematics.
Urbana, IL: University of Illinois Press.
Heuer,P.(2006).Art,Gattung,System:Logisch-systematischeAnalyseeiniger
Grundbegriffe der Biologie. (Ph.D. Thesis. University of Leipzig).
Hochberg,H.(1965).Universals,ParticularsandPredication.Reviewof
Metaphysics, 19, 87-102.
Hochberg,H.(1966).ThingsandDescriptions.AmericanPhilosophical
Quarterly, 3, 1-9. 317Unauthenticated | 79.112.227.113Download Date
| 7/3/14 7:55 PM Hochberg, H. (1969). Moore and Russell
onParticulars, Relations and Identity.
InE.D.Klemke(Ed.),StudiesinthePhilosophyofG.E.Moore(pp.155-194).
Chicago: Quadrangle. Hobbes,
T.(1999).Decorpore:Elementorumphilosophiaesectioprima.Paris: Vrin.
Hodges,W.(2001).Logic:AnIntroductiontoElementaryLogic.London:
Penguin Books.
Hull,D.L.(1976).AreSpeciesReallyIndividuals?.SystematicZoology,25,
174-191. Hull, D. L. (1997). The Ideal Species Concept and Why We
Cant Get It. In M. Claridge, A.Dawah&M.
Wilson(Eds.),Species:TheUnitsofBiodiversity (pp. 357-380). London:
Springer. Husserl, E. (1931). Ideas: General Introduction to Pure
Phenomenology. (W. R. Gibson, Trans.). London: Collier-Macmillan.
Husserl, E. (1970). Logical Investigations Vol. 2. London:
Routledge.
Husserl,E.(1976).IdeenzueinerreinenPhnomenologieundPhnomen-ologischenPhilosophie,ErstesBuch:AllgemeineEinfhrungindiereine
Phnomenologie. Den Haag: Nijhoff. Husserl, E. (1993). Logische
Untersuchungen. Tbingen: Max Niemeyer. IEEE. (n.d.). Retrieved
January 14, 2008 from http://suo.ieee.org/.ISO. (n.d.). Retrieved
January 15, 2008 from
http://www.iso.org/iso/home.htm.ISO.(1990/2000).VocabularyofTerminology.ISO-1087:1990andISO-1087:2000.
Geneva: International Organization for Standardization.
ISO.(2005).GuidelinesfortheConstruction,FormatandManagementof
MonolingualControlledVocabularies.ANSI/ISOZ39.19-2005ISBN:1-880124-65-3.
Geneva: International Organization for Standardization.
Jansen,L.(2006).
AristotelesKategoriedesRelativenzwischenDialektikund Ontologie.
Philosophiegeschichte und logische Analyse, 9, 79-104. Jansen, L.
(2007). Aristotles Categories. Topoi, 26, 151-158.
Johansson,I.(1975).ACritiqueofKarlPoppersMethodology.Gothenburg:
Scandinavian University Books.
Johansson,I.(1986).LevelsofIntensionandTheoriesofReference.Theoria,
52, 1-16. Johansson, I. (2000). Determinables as Universals. The
Monist, 83, 101-121.
Johansson,I.(2004).OntologicalInvestigations(2nded.).Frankfurt:Ontos
Verlag. (Original work published 1989. London: Routledge).
318Unauthenticated | 79.112.227.113Download Date | 7/3/14 7:55 PM
Johansson,I.(2005).Qualities,Quantities,andtheEndurant-Perdurant
DistinctioninTop-LevelOntologies.InG.Bchel,B.Klein&T.Roth-Berghofer(Eds.),ProceedingsoftheSecondInternationalWorkshopon
Philosophy and Informatics. http://CEUR-WS.org/Vol-130/.
Johansson,I.(2006).BioinformaticsandBiologicalReality.Journalof
Biomedical Informatics, 39, 274-287.
Johansson,I.(2006a).FourKindsofIs_ARelations:Genus-subsumption,
Determinable-subsumption,Specification,andSpecialization.InI.
Johansson,B.Klein& T.Roth-Berghofer(Eds.),Contributionstothe
Third InternationalWorkshoponPhilosophyandInformaticsSaarbrcken2006
(IFOMIS Reports 14) (pp. 47-62).Johansson,I.,etal.(2005).Functional
Anatomy: ATaxonomicProposal.Acta Biotheoretica, 53(3), 153-166.
Johnson, W. (1921). Logic: Part I. Cambridge: Cambridge University
Press.
Jullien,F.(1990).LArtdelaListe.Saint-Denis:PressesUniversitairesde
Vincennes, Universit de Paris VIII.
Kahn,C.H.(1978).QuestionsandCategories.InH.Hiz(Ed.),Questions(pp.
227-278). Dordrecht: Reidel.
Kalman,H.(1999).TheStructureofKnowing:ExistentialTrustasan
Epistemological Category. Uppsala: Swedish Science Press. Kant, I.
(1781). Kritik der Reinen Vernunft. Riga: J.F. Hartknoch.
Kant,I.(1902ff).Werke. Akademie-Ausgabe.Berlin:Preussische
Akademieder Wissenschaften.
Kant,I.(1950).CritiqueofPureReason.(N.K.Smith,Trans.).London:
MacMillan. Kanzian, C. (Ed.). (2008). Persistence. Ontos Verlag, 3.
Kenny, A. (1963). Action, Emotion, and the Will. London: Routledge.
Keuth,H.(2000).DiePhilosophieKarlPoppers.Tbingen:MohrSiebeck.
Englishversion:(2004).ThePhilosophyofKarlPopper.Cambridge:
Cambridge University Press. Knoepffler, Nikolaus (1999). Forschung
an menschlichen Embryonen. Stuttgart: Hirzel. Kornet, D.,
McAllister, J. & James, W. (2005). The Composite Species
Concept: A Rigorous Basis for Cladistic Practice. In T. Raydon
& L. Hemerink (Eds.),
CurrentThemesinTheoreticalBiology:ADutchPerspective(pp.95-127).
Dordrecht: Springer. 319Unauthenticated | 79.112.227.113Download
Date | 7/3/14 7:55 PM
Kumar,A.&Smith,B.(2005).OncologyOntologyintheNCIThesaurus.In
ProceedingsofAIME2005:LectureNotesinComputerScience3581(pp.
213-220). Berlin: Springer.
Lenat,D.&Guha,R.(1989).BuildingLargeKnowledge-BasedSystems:
RepresentationandInferenceintheCycProject.Reading,MA:Addison-Wesley.
Lewin,K.(1922).DerBegriffGeneseinPhysik,Biologieund
Entwicklungsgeschichte:EineUntersuchungzurvergleichenden
Wissenschaftslehre. Berlin: Springer. Lewis, D. (1986). On the
Plurality of Worlds. Oxford: Oxford University Press. Lewis, D.
(1991). Parts of Classes. Oxford: Blackwell. Lindstrm, P. (2001).
Nst sista ordet. Filosofisk tidskrift, 1, 3-6. Lorhard, J. (1613).
Theatrum philosophicum. Basilea.
Lowe,E.J.(2002).ASurveyofMetaphysics.Oxford/NewYork:Oxford
University Press.
Lowe,E.J.(2006).TheFour-Category-Ontology:AMetaphysicalFoundation
for Natural Science. Oxford: Oxford University Press.
Macdonald,C.(1998).TropesandOtherThings.InS.Laurence&C.
Macdonald(Eds.),ContemporaryReadingsintheFoundationsof Metaphysics
(pp. 329-350). Oxford: Basil Blackwell.
Mark,D.M.(1978).TopologicalPropertiesofGeographicSurfaces:
ApplicationsinComputerCartography.HarvardPapersonGeographic
InformationSystems.Cambridge,MA:LaboratoryforComputerGraphics and
Spatial Analysis.
Margolis,E.&Laurence,S.(Eds.).(1999).Concepts:CoreReadings.
Cambridge MA: MIT Press. Mayr, E. (1969). Principles of Systematic
Zoology. New York: McGraw-Hill.
Mayr,E.(1996).WhatIsaSpecies,andWhatIsNot?.PhilosophyofScience, 63,
262-277.
Mayden,R.L.(1997).AHierarchyofSpeciesConcepts:TheDenouementin the
Saga of the Species Problem. Species: The Units of Biodiversity.
op. cit., 381-424.
McCray,A.(2003).AnUpperLevelOntologyfortheBiomedicalDomain.
Comparative and Functional Genomics, 4, 80-84.
Menzel,C.(2003).OntologyTheory.InJ.Euzenat,A.Gomez-Perez,N.
Guarino&H.Stuckenschmidt(Eds.),OntologiesandSemantic
Interoperability. Retrieved from http://CEUR-WS.org/Vol-64/.
320Unauthenticated | 79.112.227.113Download Date | 7/3/14 7:55 PM
Meixner,U.(2005).OnNegativeandDisjunctiveProperties.InK.Mulligan
(Ed.), Language, Truth and Ontology (pp. 28-36). Dordrecht: Kluwer.
Michael,J.,Mejino,J.&Rosse,C.(2001).TheRoleofDefinitionsin
BiomedicalConceptRepresentation.InS.Bakken(Ed.),Proceedingsofthe
AmericanMedicalInformaticsAssociationSymposium(pp.463-467).
Philadelphia: Hanley and Belfus. Millikan, R. (1988). Language,
Thought, and Other Biological Categories: New Foundations for
Realism. Cambridge, MA: MIT Press.
Millikan,R.(1999).HistoricalKindsandtheSpecialSciences.Philosophical
Studies, 95, 45-65.
Mislove,M.,Moss,L.&Oles,F.(1990).PartialSets.Situation
TheoryandIts Applications (pp. 117-131). Stanford, CA: Center for
the Study of Language and Information. Mount, D. W. (2004).
Bioinformatics: Sequence and Genome Analysis (2nd ed.). Cold Spring
Harbor: Cold Spring Harbor Laboratory Press.
Mourelatos,A.(1978).Events,Processes,andStates.Linguisticsand
Philosophy, 2, 415-434.
Mourelatos,A.(1993).AristotlesKinesis/EnergeiaDistinction:AMarginal
NoteonKathleenGillsPaper.CanadianJournalofPhilosophy,23,385-388.
Myrdal,G.(1968).Objektivitetsproblemetisamhllsforskningen.Stockholm:
Rabn & Sjgren. Myrdal, G. (1973). Critical Essays on Economics.
New York: Pantheon Books. Nagel, E. (1961). The Structure of
Science. London: Routledge. Nagel, T. (1986). The View from
Nowhere. Oxford: Oxford University Press. Nagel, T. (1997). The
Last Word. Oxford: Oxford University Press.
Myrdal,G.(1956).ValueinSocialTheory:ASelectionofEssaysin
Methodology. London: Routledge. Nardi,D.&Brachman,R.J.(2003).
AnIntroductiontoDescriptionLogics.In
F.Baader,etal.(Eds.),TheDescriptionLogicsHandbook(pp.1-40).
Cambridge: Cambridge University Press.
NationalCancerInstitute.(n.d.).NationalCancerInstituteThesaurus
(NCIT).RetrievedNovember1,2005from
http://nciterms.nci.nih.gov/NCIBrowser/Dictionary.NationalLibraryofMedicine.(n.d.).NationalInstitutesofHealth,Health
andHumanServices.RetrievedJanuary16,2008from
http://www.nlm.nih.gov/research/umls/.321Unauthenticated |
79.112.227.113Download Date | 7/3/14 7:55 PM Niles, I. & Pease,
A. (2001). Towards a Standard Upper Ontology. In C. Welty & B.
Smith (Eds.), Proceedings of the 2nd International Conference on
Formal OntologyinInformationSystems(FOIS-2001)(pp.29).NewYork:ACM
Press. OBO:OpenBiomedicalOntologiesConsortium.(n.d.).TheOBOFoundry.
Retrieved January 17, 2008 from
http://obofoundry.org/.OBOEvaluationCriteria,Version7(2006).RetrievedJanuary14,2006from
http://sourceforge.net/mailarchive/forum.php?forum_id=12140&max
_rows=25&style=nested&viewmonth=200602
Oehler,K.(1986).Aristoteles:Werkeindeutscherbersetzung.Vol.1/1:
Kategorien (2nd ed.). Berlin: Akademie Verlag. Olson, E. T. (1999).
The Human Animal: Personal Identity without Psychology. Oxford:
Oxford University Press.
Ontologyportal:SuggestedUpperMergedOntology(SUMO)OntologyPortal.
(n.d.). Retrieved January 2, 2008 from
http://www.ontologyportal.org/.Ouzounis,C.A.(2003).ClassificationSchemesforProteinStructureand
Function. Nature Reviews Genetics, 4, 508-519. Peirce, C. S.
(1998). Collected Papers. Bristol: Thoemmes.Perl Foundation.
(n.d.). Retrieved January 15, 2008 from
www.perl.org.Pisanelli,D.M.(Ed.).(2004).OntologiesinMedicine:Proceedingsofthe
WorkshoponMedicalOntologies,Rome,October2003.Amsterdam:IOS Press.
Plato.(1961).Phaedrus.InE.Hamilton&H.Cairns(Eds.),Plato:The
Collected Dialogues (pp. 475-526). Princeton: Princeton University
Press.
Plato.(1961a).Theaetetus.InE.Hamilton&H.Cairns(Eds.),Plato:The
Collected Dialogues (pp. 845-919). Princeton: Princeton University
Press.
Popper,K.(1945).TheOpenSocietyandItsEnemies.London:Routledgeand
Kegan Paul. Popper, K. (1959). The Logic of Scientific Discovery.
London:
Hutchinson.Popper,K.(1963).ConjecturesandRefutations:TheGrowthofScientific
Knowledge. London: Routledge. Popper, K. (1972). Objective
Knowledge. Oxford: Clarendon Press.
Pseudo-DionysiusAreopagita.(1857-1866).Dedivinisnominibus,Patrologia
Graeca, 585-984. J. P. Migne (Ed.). Paris.
Putnam,H.(1975).TheMeaningofMeaning.Mind,LanguageandReality (pp.
215-271). Cambridge: Cambridge University Press.
Rea,M.C.(1995).TheProblemofMaterialConstitution.ThePhilosophical
Review, 104(4), 525-552. 322Unauthenticated |
79.112.227.113Download Date | 7/3/14 7:55 PM Rector, A., Nolan, W.
& Kay, S. (1991). Foundations for an Electronic Medical Record.
Methods of Information in Medicine, 30, 179-186. Reydon, T. A.
(2005). Species as Units of Generalization in Biological Science: A
Philosophical Analysis. (Ph.D. Thesis. University of Leiden).
Ridder, L. (2002). Mereologie: Ein Beitrag zur Ontologie und
Erkenntnistheorie. Frankfurt: Klostermann. Rdl, S. (2005).
Kategorien des Zeitlichen: Eine Untersuchung der Formen des
endlichen Verstandes. Frankfurt: Suhrkamp Verlag.
Rosse,C.&Mejino,J.(2003).
AReferenceOntologyforBioinformatics:The
FoundationalModelofAnatomy.JournalofBiomedicalInformatics,36,
478-500. Rosse, C. & Mejino, J. (2007). The Foundational Model
of Anatomy Ontology.
InA.Burger,D.Davidson&R.Baldock(Eds.),AnatomyOntologiesfor
Bioinformatics: Principles and Practice. New York: Springer.
Russell,B.(1940).AnInquiryintoMeaningandTruth.London:George Allen
and Unwin.
Russell,B.(1948).HumanKnowledge:ItsScopeandLimits.London:George
Allen and Unwin.
Russell,B.(1959).MyPhilosophicalDevelopment.London:George Allenand
Unwin.
Russell,S.&Norvig,P.(1995).ArtificialIntelligence:AModernApproach.
Englewood. Cliffs, NJ: Prenctice Hall. Ryle, G. (1949). The Concept
of Mind. Chicago: University of Chicago Press.Schark, M. (2005).
Lebewesen versus Dinge: Eine metaphysische Studie. Berlin: De
Gruyter.
Schuhmann,K.&Smith,B.(1987).Questions:AnEssayinDaubertian
Phenomenology. Philosophy and Phenomenological Research, 47,
353-384. Searle, J. (1959). Determinables and the Notion of
Resemblance. Proceedings of the Aristotelian Society, 33, 141-158.
Searle, J. (1983). Intentionality. Cambridge: Cambridge University
Press.
Sellars,W.F.(1963).PhilosophyandtheScientificImageofMan.Science,
Perception and Reality (pp. 1-40). London: Routledge. Simons, P. M.
(1987). Parts: A Study in Ontology. Oxford: Clarendon Press.
Simons,P.M.(1992).Categoriesand WaysofBeing.InPhilosophyandLogic
inCentralEuropefromBolzanotoTarsk:SelectedEssays(pp.377-394).
Dordrecht: Reidel.
Simons,P.M.(2005).AgainstSetTheory.InM.E.Reicher&J.C.Marek
(Eds.), Experience and Analysis (pp. 143-152). Vienna: HPT&BV.
323Unauthenticated | 79.112.227.113Download Date | 7/3/14 7:55 PM
Smith,B.(1991).Relevance,RelatednessandRestrictedSetTheory.InG.
Schurz&G.Dorn(Eds.),AdvancesinScientificPhilosophy:Essaysin
Honour of Paul Weingartner (pp. 45-56). Amsterdam: Rodopi.
Smith,B.(1999).TruthmakerRealism.AustralasianJournalofPhilosophy,
77(3) 274-291.Smith, B. (2001). Fiat Objects. Topoi, 20(2),
131-148.
Smith,B.(2001a).TrueGrid.InD.R.Montello(Ed.),SpatialInformation
Theory: Foundations of Geographic Information Science (pp. 14-27).
Berlin: Springer.
Smith,B.(2003).Ontology.InL.Floridi(Ed.),BlackwellGuidetothe
Philosophy of Computing and Information (pp. 155-166). Oxford:
Wiley.
Smith,B.(2003a).Aristotels2002.InT.Buchheim,H.Flashar&R.King
(Eds.),KannmanheutenochetwasanfangenmitAristoteles?(pp.3-38).
Darmstadt: Meiner Felix Verlag.
Smith,B.(2004).BeyondConcepts:OntologyasRealityRepresentation.In A.
Varzi & L. Vieu (Eds.), Formal Ontology and Information
Systems, (pp. 73-84). Amsterdam: IOS Press. Smith, B. (2005). The
Logic of Biological Classification and the Foundations of
BiomedicalOntology.InP.Hjek,etal.(Eds.),Logic,Methodologyand
Philosophy of Science (pp. 505-520). London: Kings College
Publications.
Smith,B.(2005a).AgainstFantology.InM.Reicher&J.Marek(Eds.),
Experience and Analysis (pp. 153-170). Vienna: HPT&PV. Smith,
B. (2006) Against Idiosyncrasy in Ontology Development. In B.
Bennett & C. Fellbaum (Eds.), Formal Ontology in Information
Systems (pp. 15-26). Amsterdam: IOS Press.
Smith,B.,etal.(2005).RelationsinBiomedicalOntologies.GenomeBiology,
6, R46. Smith B., et al. (2007). The OBO Foundry: Coordinated
Evolution of Ontologies
toSupportBiomedicalDataIntegration.NatureBiotechnology,25,1251-1255.
Smith,B.&Brogaard,B.(2002).QuantumMereotopology.Annalsof
Mathematics and Artificial Intelligence, 35 (1-2), 153-175.
Smith,B.&Brogaard,B.(2003).AUnifiedTheoryofTruthandReference.
Logique et Analyse, 43, 49-93. Smith, B. & Ceusters, W. (2007).
Ontology as the Core Discipline of Biomedical
Informatics:LegaciesofthePastandRecommendationsfortheFuture
DirectionofResearch.InG.Dodig-Crnkovic&S.Stuart(Eds.),
Computation, Information, Cognition: The Nexus and The Liminal (pp.
104-122). Newcastle: Cambridge Scholars Press.324Unauthenticated |
79.112.227.113Download Date | 7/3/14 7:55 PM Smith, B., Ceusters,
W. & Siebert, D. (2004). Was die philosophische Ontologie
zurbiomedizinischenInformatikbeitragenkann.Information:Wissenschaft
und Praxis, 55, 143-146.
Smith,B.,Ceusters,W.&Temmerman,R.(2005).Wsteria.InMedical
InformaticsEurope(MIE2005),Geneva,StudiesinHealthTechnologyand
Informatics (pp. 647-652). Amsterdam: IOS Press.
SmithB.&Grenon,P.(2004).TheCornucopiaofFormal-Ontological
Relations. Dialectica, (58) 2004: 279-296
Smith,B.,Khler,J.&Kumar,A.(2004).OntheApplicationofFormal
PrinciplestoLifeScienceData: ACaseStudyintheGeneOntology.InE.
Rahm(Ed.),ProceedingsofDataIntegrationintheLifeSciences(DILS 2004)
(pp. 79-94). Berlin: Springer.
Smith,B.,Kusnierczyk,W.,Schober,D.&Ceusters,W.(2006).Towardsa
ReferenceTerminologyforOntologyResearchandDevelopmentinthe
BiomedicalDomain.InO.Bodenreider(Ed.),ProceedingsoftheSecond
InternationalWorkshoponFormalBiomedicalKnowledgeRepresentation
(KR-MED 2006) (pp. 57-65). Retrieved from
http://www.CEUR-WS.org/Vol-222/.
Smith,B.&Mark,D.M.(1999).OntologywithHumanSubjectsTesting: An
EmpiricalInvestigationofGeographicCategories.AmericanJournalof
Economics and Sociology, 58 (2),
245-272.SmithB.,Mejino,J.,Schulz,S.,Kumar,A.&Rosse,C.(2005).Anatomical
InformationScience:SpatialInformationTheory.ProceedingsofCOSIT 2005
(pp. 149-164). Berlin: Springer. Smith, B. & Mulligan, K.
(1983). Framework for Formal Ontology. Topoi, 2,
73-85.Smith,B.,Munn,K.&Papakin,I.(2004).BodilySystemsandtheSpatial-Functional
Structure of the Human Body. In D. Pisanelli (Ed.), Ontologies in
Medicine:Proceedingsofthe WorkshoponMedicalOntologies(pp.39-63).
Amsterdam: IOS Press.
Smith,B.&Rosse,C.(2004).TheRoleofFoundationalRelationsinthe
AlignmentofBiomedicalOntologies.InM.Fieschi,etal.(Eds.),Medinfo
2004 (pp. 444-448). Amsterdam: IOS Press.
Smith,B.&Smith,D.W.(1995).Introduction.InB.Smith&D.W.Smith
(Eds.),TheCambridgeCompaniontoHusserl.Cambridge:Cambridge
University Press. Smith, B. & Varzi, A. (1999). The Niche. Nos,
33, 198-222. Smith,B.&Varzi,
A.(2002).SurroundingSpace:TheOntologyofOrganism-Environment
Relations. Theorie in den Biowissenschaften, 121, 139-162.
325Unauthenticated | 79.112.227.113Download Date | 7/3/14 7:55 PM
Smith, B., Williams, J. & Schulze-Kremer, S. (2003). The
Ontology of the Gene Ontology. In Proceedings of the Annual
Symposium of the American Medical Informatics Association (pp.
609-613). Amsterdam: IOS Press.
SNOMED(TheSystematizedNomenclatureofMedicine).(n.d.).Retrieved
August 6, 2006 from http://www.snomed.org/snomedct/.
Sowa,J.(n.d.).SemanticNetworks.RetrievedJune2,2006from
http://www.jfsowa.co
m/pubs/semnet.htm.Sowa,J.F.(2000).KnowledgeRepresentation:Logical,Philosophicaland
Computational Foundations. Pacific Grove, CA: Brooks Cole.
Sowa,J.F.(2001).Top-LevelCategories.RetrievedAugust8,2006from
http://users.bestweb.net/~sowa/ontology/toplevel.htm.Stekeler-Weithofer,P.(2000).KritikderErkenntnistheorie:ZurLogikvon
GegenstandsbezugundWahrheitbeiHegel(undWittgenstein).InC.Iber
(Ed.),HegelsSeinslogik:InterpretationenundPerspektiven(pp.59-79).
Berlin: Akademie
Verlag.Stell,J.G.(1999).GranulationforGraphs.InC.Freksa&D.M.Mark(Eds.),
SpatialInformationTheory:CognitiveandComputationalFoundationsof
Geographic Information Science (Lecture Notes in Computer Science,
1661) (pp. 417-432). Berlin:
Springer.Stell,J.G.(2000).TheRepresentationofDiscreteMulti-ResolutionSpatial
Knowledge.InProceedingsofSeventhInternationalConferenceon
PrinciplesofKnowledgeRepresentationandReasoning(KR2000)(pp.38-49).
San Francisco: Morgan Kaufmann Publishers. Stell, J. G. &
Worboys, M. F. (1999). Generalizing Graphs Using Amalgamation and
Selection. In R. Guting, D. Papadial & F. Lochovsky (Eds.),
Advances in Spatial Databases 1999, Proceedings (pp. 19-32).
Berlin: Springer.
Stoecker,R.(1999).DerHirntod:einmedizinethischesProblemundeine
moralphilosophische Transformation. Freiburg: Karl Alber Verlag.
Stout, R. 1997 Processes. Philosophy, 72, 19-27.
Strawson,P.F.(1959).Individuals:AnEssayinDescriptiveMetaphysics.
London: Routledge.Surez, F. (1856). Disputationes Metaphysicae,
Opera Omnia. Paris: Vivs.
Taxonomicon.(n.d.).RetrievedJanuary15,2008from
http://taxonomicon.taxonomy.nl/Taxon
tree.aspx.TemmermanR.(2000).TowardsNewWaysofTerminologyDescription.
Amsterdam:
Benjamins.Thompson,M.(1995).TheRepresentationofLife.InR.Hursthouse,etal.
(Eds.), Virtues and Reasons (pp. 247-297). Oxford: Clarendon Press.
326Unauthenticated | 79.112.227.113Download Date | 7/3/14 7:55 PM
Thompson,M.(2008).NaiveActionTheory.LifeandAction.Harvard
University Press. Trettin,K.
(2000).OntologieindividuellerQualitten.InR.Hntelmann&E.
Tegtmeier (Eds.), Ontologie (pp. 145-164). St. Augustin: Academica.
Vaihinger, H. (1924). The Philosophy of As-If. London: Routledge.
Vendler,Z.(1972).LinguisticsinPhilosophy.Ithaca,NY:CornellUniversity
Press.
Vizenor,L.(2004).ActionsinHealthCareOrganizations:AnOntological
Analysis.InM.Fieschi,etal.(Eds.),MedInfo2004(pp.1403-1407).
Amsterdam: IOS Press. Volta, G. & Egenhofer, M. (1993).
Interaction with GIS Attribute Data Based on Categorical Coverages.
In A. Frank & I. Campari (Eds.), Spatial Information Theory: A
Theoretical Basis for GIS (pp. 215-233). London: Springer.
VonWachter,D.(2000).DingeundEigenschaften:VersuchzurOntologie.
Dettelbach: Rll. Williams, D. C. (1953). The Elements of Being.
Review of Metaphysics, 7,
171-192.Wilson,J.(1999).BiologicalIndividuality:TheIdentityandPersistenceof
Living Entities. Cambridge: Cambridge University Press. Wolff, C.
(1736). Philosophia Prima sive Ontologia. Leipzig.
WordNet(n.d.)RetrievedJanuary2,2006from
http://www.cogsci.princeton.edu/cgi-bin/webwn2.0?stage=1&word=cat.
Wster,E.(1979).EinfhrungindieAllgemeineTerminologielehreund
Terminologische Lexikographie. Vienna: Springer.
Wster,E.(2003).TheWordingoftheWorldPresentedGraphicallyand
Terminologically. Terminology, 9 (2), 269-297.
Zaiss,A.,etal.(2005).MedizinischeDokumentation,Terminologieund
Linguistik. In T. M. Lehmann (Ed.), Handbuch der Medizinischen
Informatik (pp. 89-143). Vienna: Hanser. 327Unauthenticated |
79.112.227.113Download Date | 7/3/14 7:55 PM Unauthenticated |
79.112.227.113Download Date | 7/3/14 7:55 PM
