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May 2010, University of California Los Angeles Tissue Banks and Pathology Tools and Integrative Cancer Research Joint Workspace Face to Face Center for Biomedical Informatics and Information Technology, National Cancer Institute

May 2010, University of California Los Angeles Tissue Banks and Pathology Tools and Integrative Cancer Research Joint Workspace Face to Face Center for

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May 2010, University of California Los Angeles

Tissue Banks and Pathology Tools

and Integrative Cancer Research Joint Workspace

Face to FaceCenter for Biomedical Informatics and

Information Technology, National Cancer Institute

Logistics

• Restrooms: Outside to your left• Wireless: SSID is EVENTS (Network does not require authentication) 

• Covel Commons wireless SSID is UCLA_WEB, the Covel Commons wireless network only allows web, secure web, and VPN traffic. 

• Networking session tonight from 5:30 PM to ~ 7:00 PM in the CNSI

• Shuttle service to the CNSI starts at 5:30 and will run continuously from CNSI to the hotel from 6:15 to 7:15 ../’\’]PM

• No food or drink allowed in the auditorium (foyer ok)• Please refer to the Agenda in your packet. We will try to

stay to the times noted.

National Cancer Institute Center for Biomedical Informatics and Information Technology

• Ian Fore, D. Phil• Associate Director, Biorepository and Pathology Informatics

• Juli Klemm, Ph.D. • Associate Director, Integrative Cancer Research Products and Programs

• Leslie Derr, Ph.D.• Director of Community Alliances and Support

• Caterina Lasome, Ph.D., MBA, RN, CPHIMS• Chief Operating Officer

• Mervi Heiskanen, Ph.D.• Associate Director, Community Alliances

• Diane Reeves, RN, MSN• Associate Director, Biomedical Data Standards

NCI CBIIT Contractors

• Elaine Freund, Ph.D.• ICR Workspace Lead, 3rd

Millennium, Inc. • Anna Fernandez, Ph.D.

• TBPT Workspace Lead, Booz Allen Hamilton

• Patti Duckworth Kwong• ICR Workspace, Booz Allen

Hamilton• Beth Leary DiGiulian

• TBPT Workspace, Booz Allen Hamilton

• Kevin Groch, Ph.D.• ICR Technical Lead, SAIC-F

• Rod Winkler, Ph.D.• ICR Technical Lead, SAIC-F

• Kathleen McCormick• TBPT Technical Lead SAIC-F

• Sudha Chudamanis• TBPT Technical Lead SAIC-F

• Brent Lander• TBPT Technical Lead SAIC-F

NCI CBIIT Knowledge Center

• Zhong Li, Ph.D.• Molecular Analysis Tools

Knowledge Center• Mark Watson, M.D., Ph.D.

• TBPT Knowledge Center• Poornima Govindrao, Ph.D.

• TBPT Knowledge Center

• Charlie Mead, M.D.• Chief Technology Officer, NCI

CBIIT, 3rd Millennium

Location of Breakout and Lunch May 4

• Breakout Session (DE-Identification of Surgical

Pathology Reports) will be held on the THIRD FLOOR of

COVEL Commons

• Lunch is in LEVEL A of COVEL Commons. You have to have a ticket to obtain lunch.See Patti

and/or Beth for purchase of a lunch ticket ($7 each)

Agenda – Tuesday, May 4, 2010

• Keynote Address• caTissue Suite Development Plans• Breakout Sessions:

• De-Identification of Surgical Pathology Reports (Covel Commons)• Enriching your Biospecimen Data (stay in Auditorium)

• Break (11:00-11:30 am)• The Common Biorepository Model Update• caBIG® Biospecimen Management Services• Lunch (12:45-1:45pm) Covel Commons Level A• Pathology Data Sharing, Pathology Imaging, and LIDDEx• The Specimen Lifecycle: Processing and Tracking Session I• Break (3:15-3:35pm)• The Specimen Lifecycle: Processing and Tracking Session II• Connecting to caBIG® and other Grids and/or Systems: • Tool and Project Demos (5:30-6:30)

Agenda – Wednesday, May 5

• Keynote Address• Services Aware Interoperability Framework• The Life Sciences Business Architecture Model (LS BAM)• Break (10:00-10:30 am)• The Life Sciences Domain Analysis Model• Breakout Sessions:

• Life Science BAM working session (Covel Commons)• Integration Scenarios (stay in Auditorium)

• Lunch (12:00-1:30pm) Walk to Food Court• Report out from Breakout Sessions• Dynamic Extensions, Semantic Infrastructure and Life Sciences • Cancer Human Biobank (caHUB)• Break (3:15-3:30pm)• CBIIT’s Roadmap• CBIIT’s Technology Strategy• Cloud Deployment• Community Code• Followed by a Networking Session at the California NanoSystems Institute

Agenda – Thursday, May 6

• Keynote Address• Integrative Cancer Research Year in Review• Cancer Delivery Nanoparticles• Knowledgebase of Nanomaterial-Biological Interactions and Nano-TAB • Break (10:15-10:30 am)• Analytic Methods for Cancer Nanotechnology• HL7 and the Clinical Genomics Working Group • caArray and caIntegrator2• Lunch (12:00-1:30pm) Walk to Food Court• Test-to-Best, An In Silico Research Center of Excellence Focused on

Predictions of Brain Cancer Treatment Efficacy • Enterprise Conformance and Compliance Framework (ECCF) and Life

Sciences• caBIO/Enterprise Conformance and Compliance Framework (ECCF) Pilot• Wrap Up (3:00-3:15pm)

Introductions

Map of Where people Attending the meeting are From

Welcome from University of California Los Angeles

• Judith C. Gasson, Ph.D.• Director UCLA, Jonsson Comprehensive Cancer

Center• Professor, David Geffen School of Medicine

• Leonard H. Rome• Senior Associate Dean for Research, UCLA, David

Geffen School of Medicine• Associate Director California Nanosystems Institute 

Welcome from University of California Los Angeles

• Siavash K. Kurdistani, M.D. • Assistant Professor in the Department of Biological

Chemistry, David Geffen School of Medicine at UCLA

And

SPECIAL THANKS GOES TO

• Robert (Buddy) A. Dennis, Ph.D.• Director of Computing Technologies Research Lab

David Geffen School of Medicine, UCLA