1
Mapping the Formation of Eumelanin using Coupled Measurements 2. A finely balanced System: Eumelanin derived from L-Dopa 3. Joining Parameters: Excitation-Emission Matrices (EEM) 4. Areas of Interest: The Building Sites of Melanin 5. Tracking Pieces of the Puzzle: Characteristic Lifetimes in the EEM 6. Closer to Nature: Influence of Effectors on Melanin Structure 1. Emulating Nature: Making Melanin in the Lab Conclusions & Outlook The work presented here is kindly supported by the The Scottish Universities Physics Alliance Philip Yip 1,2 & Jens U Sutter 2 * 1 Horiba IBH Ltd. 133 Finnieston Street, Glasgow G3 8HB, Scotland, UK 2 Photophysics Group, Department of Physics, John Anderson Building, University of Strathclyde, Glasgow, G4 0NG, Scotland, UK * [email protected] References: [1] Ito S. A chemist’s view of melanogenesis. Pigment Cell Research 16 (3), 230, 2003 [2] Sutter JU & Birch DJS Metal Ion Influence on Eumelanin Fluorescence and Structure Methods and Applications in Fluorescence 2 024005 2014 [3] Corani A. Huijser A. Iadonisi A. Pezzella A. Sundström V. & d’Ischia M. Bottom-Up Approach to Eumelanin Photoprotection: Emission Dynamics in Parallel Sets of Water-Soluble 5,6-Dihydroxy- Indole Based Model Systems. Journal of Physical Chemistry B 116(44), 13151-13158, 2012 [4] Corani A. Pezzella A. Pascher T. Gustavson T. Markovitsi D. Huijser A. d’Ischia M & Sundström V. Excited-State Proton-Transfer Processes of DHICA Resolved: From Sub-Picoseconds to Nanoseconds Journal of Physical Chemistry Letters 4 1383-1388, 2013 [5] Birch DJS & Sutter JU The Effect of Copper on Eumelanin Photophysics and Morphology , Proceeding of SPIE 8587 858705 2013 Abstract Melanin plays a crucial role as a pigment all through the animal kingdom. Being a macromolecule just on the divide between an ordered crystalline or a purely amorphous form melanin has proven a challenge to structure-function analysis. Melanin assembles from small molecules much like a jigsaw and much like in a jigsaw the fine detail quickly vanishes in the overall picture. With Melanin being first and foremost a photo- active molecule we focus on spectral properties for the characterization of its structure using linked measurements of excitation and emission to identify ‘areas of interest’ in the Excitation- Emission Matrix (EEM). We then probe for characteristic fluorescence lifetimes in the identified areas to track melanin building blocks through the formation pathway. A photo-active molecule like melanin can be characterized through a wide range of parameters: its absorbance (key to its purpose as our ‘natural sunscreen’), its fluorescence; (small but not at all negligible), its excitation, the size of its particles, its conductivity and many more. Tacking the evolution of EEMs during the formation process of melanin allows to identify specific sites where the absorption generates significant fluorescence emission. Some of these area show a transient character suggesting that fluorescent structures are later transformed or integrated into non-fluorescent parts of the molecule. Sample, Fl. Wavelength/nm 1 /ns 1 /% B 2 /ns 2 /% B 3 /ns 3 /% B no Cu 2+ , 480 4.88 0.12 18 1.01 0.04 23 0.03 0.05 59 no Cu 2+ , 530 4.87 0.17 17 1.03 0.17 26 0.24 0.01 57 4 M Cu 2+ , 480 6.33 0.03 100 4 M Cu 2+ , 530 6.24 0.03 81 1.21 0.11 19 0 0.2 0.4 0.6 0.8 1 1.2 1.4 1.6 1.8 2 250 300 350 400 450 500 0 0.2 0.4 0.6 0.8 1 1.2 1.4 1.6 1.8 2 250 300 350 400 450 500 The formation of melanin can be easily tracked by recording the evolution of its characteristic absorption spectrum. Taking absorbance scans over time reveals several isosbestic points in the spectrum. While an isosbestic point is not in itself an indication of the conversion of one species into another or of an equilibrium between two species it does show that the stoichiometry (the relative quantity of reactants and products) remains constant. With the melanin absorption spectra showing several isosbestic points we have clear indication of a highly regulated, highly interlinked formation network [2]. A small change in an external parameter – here the pH – is sufficient to blur one isosbestic point (Figure) indicating a change in the chemical composition. Measuring melanin parameters separately often leaves difficulties in comparing and linking findings. To gain control over this plethora of parameters we conducted joined- measurements recording melanin characteristics simultaneously. An Excitation Emission Matrix (EEM) provides a highly detailed ‘spectral fingerprint’ of the melanin. Melanin offers great opportunities as a bio-engineering tool to build bio circuitry or as a immuno- neutral cover for implants or nano-medical compounds. To fully exploit these opportunities we need greater understanding of melanin formation. Tracking joined characteristic parameters during the formation process of complex macro-molecules opens opportunities to identify and trace separate building blocks of the molecule. Excellent work has been done to characterize single building blocks of melanin [3,4]. We can use these characterisations to identify components of melanin present during the formation process. Tracking the fluorescence lifetimes in Region ‘B’ reveals three characteristic decay times, two showing a transient nature and a third component rising over the course of melanin formation. The component with the lifetime of 1.79 ns is likely to be 5,6-Dihydroxy-Indole (DHI) [3]. DHICA DHICA DHI Using EEMs we identify differences between lab generated and naturally occurring melanin and show how the addition of the micro nutrients can lead to a melanin closer in characteristics to the natural form (Figure below). The production of eumelanin in the lab is a well established technique yielding highly reproducible results. Alas melanin extracted from natural sources does show small but intriguing differences to lab generated melanin. The addition of micro-nutrients like transition metal ions to the reaction can alter the characteristics of the melanin generated [5] (Figure below). In the human body eumelanin derives from the amino acid Tyrosine which is then converted by enzymatic action and oxidisation into the molecule L-Dopa to start the melanin formation pathway. Starting the reaction directly from L-Dopa has proven to be a realistic method to investigate melanin in laboratory conditions [1]. Figure 2: Evolution of the absorption spectrum of eumelanin Shown are the absorption spectra of de novo forming melanin recorded in 5 minute intervals at pH 8 (left) and pH 8.3 (right). The pH change leads to the blurring of the isosbestic point at 320nm emission. Figure 5: Evolution of lifetimes Tracking the evolution of fluorescent lifetimes in areas of interest allows to pinpoint the presence of characteristic melanin components. Figure 1: The melanin formation pathways Melanin is generated through a complex network of reaction-pathways leading to eumelanin (black-brown pigment) and pheomelanin (reddish). By adding or omitting Cysteine and the enzyme Tyrosinase we can generate pure eumelanin or a mixture of both melanin types. Figure 4: Areas of interest in the excitation-emission matrix Recording EEMs at different times during the melanin formation process reveals regions of high excitation and emission. We observe a characteristic area ‘A’ where the initial L-Dopa molecule absorbs and fluoresces. Areas ‘B’ and ‘C’ show a longer joint excitation wavelength around 325nm and emission at 415nm and 535nm respectively. Figure 6a: Micro-nutrients influence eumelanin structure Adding copper to de novo forming melanin simplifies the fluorescence decay of melanin emitting at 480nm and 530nm (1) [5]. Variations in the pH as well as addition of transition metal ions leads to striking differences in melanin colour (2). Figure 6b: The effect of micro- nutrients on EEMs Comparing the EEM of laboratory melanin (1) with that of natural sepia melanin (2) we find characteristic differences like a short wavelength area present in natural melanin but not in lab melanin (ex: 275nm, em:340nm). Addition of 10 M copper ions partially restores this area (3). Figure 3: The EEM of synthesised eumelanin Joined recording of fluorescence excitation and emission yields a characteristic ‘landscape’ of melanin fluorescence: a unique spectral fingerprint. pH 9 & 10 pH 9 & 10 pH 10 pH 10 no ions Cu 2+ Ni 2+ K + 300 400 500 600 700 300 400 500 600 340 275 0 2000000 4000000 Scale = 36 0 2000000 4000000 Scale = 36 300 400 500 600 700 300 400 500 600 340 275 0 2000000 4000000 Scale = 36 0 2000000 4000000 Scale = 36 300 400 500 600 700 300 400 500 600 340 275 0 2000000 4000000 Scale = 36 0 2000000 4000000 Scale = 36 unmodified melanin melanin from Sepia Officinalis melanin generated with Cu 2+

Scale = 36 · macromolecule just on the divide between an ordered crystalline or a purely amorphous form melanin has proven a challenge to structure-function analysis. Melanin assembles

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Page 1: Scale = 36 · macromolecule just on the divide between an ordered crystalline or a purely amorphous form melanin has proven a challenge to structure-function analysis. Melanin assembles

Mapping the Formation of Eumelaninusing

Coupled Measurements

2. A finely balanced System:Eumelanin derived from L-Dopa

3. Joining Parameters: Excitation-Emission Matrices (EEM)

4. Areas of Interest:

The Building Sites of Melanin

5. Tracking Pieces of the Puzzle:Characteristic Lifetimes in the EEM

6. Closer to Nature:Influence of Effectors on Melanin Structure

1. Emulating Nature:Making Melanin in the Lab

Conclusions & Outlook

The work presented here is kindly supported by theThe Scottish Universities Physics Alliance

Philip Yip1,2 & Jens U Sutter2*

1 Horiba IBH Ltd. 133 Finnieston Street, Glasgow G3 8HB, Scotland, UK

2 Photophysics Group, Department of Physics, John Anderson Building,

University of Strathclyde, Glasgow, G4 0NG, Scotland, UK

* [email protected]

References:

[1] Ito S. A chemist’s view of melanogenesis. Pigment Cell Research 16 (3), 230, 2003[2] Sutter JU & Birch DJS Metal Ion Influence on Eumelanin Fluorescence and Structure Methods and

Applications in Fluorescence 2 024005 2014[3] Corani A. Huijser A. Iadonisi A. Pezzella A. Sundström V. & d’Ischia M. Bottom-Up Approach to

Eumelanin Photoprotection: Emission Dynamics in Parallel Sets of Water-Soluble 5,6-Dihydroxy-Indole Based Model Systems. Journal of Physical Chemistry B 116(44), 13151-13158, 2012

[4] Corani A. Pezzella A. Pascher T. Gustavson T. Markovitsi D. Huijser A. d’Ischia M & Sundström V. Excited-State Proton-Transfer Processes of DHICA Resolved: From Sub-Picoseconds to Nanoseconds Journal of Physical Chemistry Letters 4 1383-1388, 2013

[5] Birch DJS & Sutter JU The Effect of Copper on Eumelanin Photophysics and Morphology , Proceeding of SPIE 8587 858705 2013

AbstractMelanin plays a crucial role as a pigment all through the animal kingdom. Being amacromolecule just on the divide between an ordered crystalline or a purely amorphous formmelanin has proven a challenge to structure-function analysis.

Melanin assembles from small molecules much like a jigsaw and much like in a jigsaw the finedetail quickly vanishes in the overall picture. With Melanin being first and foremost a photo-active molecule we focus on spectral properties for the characterization of its structure usinglinked measurements of excitation and emission to identify ‘areas of interest’ in the Excitation-Emission Matrix (EEM). We then probe for characteristic fluorescence lifetimes in the identifiedareas to track melanin building blocks through the formation pathway.

A photo-active molecule like melanin can be characterized through a wide range ofparameters: its absorbance (key to its purpose as our ‘natural sunscreen’), its fluorescence;(small but not at all negligible), its excitation, the size of its particles, its conductivity and manymore.

Tacking the evolution of EEMs during the formation process of melaninallows to identify specific sites where the absorption generates significantfluorescence emission. Some of these area show a transient charactersuggesting that fluorescent structures are later transformed or integratedinto non-fluorescent parts of the molecule.

Sample, Fl.

Wavelength/nm 1 /ns 1 / %B 2 /ns 2 / %B 3 /ns 3 / %B

no Cu2+

, 480 4.88 0.12 18 1.01 0.04 23 0.03 0.05 59

no Cu2+

, 530 4.87 0.17 17 1.03 0.17 26 0.24 0.01 57

4 M Cu2+

, 480 6.33 0.03 100

4 M Cu2+

, 530 6.24 0.03 81 1.21 0.11 19

0

0.2

0.4

0.6

0.8

1

1.2

1.4

1.6

1.8

2

250 300 350 400 450 5000

0.2

0.4

0.6

0.8

1

1.2

1.4

1.6

1.8

2

250 300 350 400 450 500

The formation of melanin can be easily tracked by recording the evolution of its characteristicabsorption spectrum. Taking absorbance scans over time reveals several isosbestic points in thespectrum. While an isosbestic point is not in itself an indication of the conversion of one speciesinto another or of an equilibrium between two species it does show that the stoichiometry (therelative quantity of reactants and products) remains constant.

With the melanin absorption spectrashowing several isosbestic points wehave clear indication of a highlyregulated, highly interlinked formationnetwork [2].

A small change in an externalparameter – here the pH – is sufficientto blur one isosbestic point (Figure)indicating a change in the chemicalcomposition.

Measuring melanin parametersseparately often leaves difficulties incomparing and linking findings. Togain control over this plethora ofparameters we conducted joined-measurements recording melanincharacteristics simultaneously.

An Excitation Emission Matrix (EEM)provides a highly detailed ‘spectralfingerprint’ of the melanin.

Melanin offers great opportunities as a bio-engineering tool to build bio circuitry or as a immuno-neutral cover for implants or nano-medical compounds. To fully exploit these opportunities we needgreater understanding of melanin formation. Tracking joined characteristic parameters during theformation process of complex macro-molecules opens opportunities to identify and trace separatebuilding blocks of the molecule.

Excellent work has been done to characterizesingle building blocks of melanin [3,4]. We canuse these characterisations to identifycomponents of melanin present during theformation process. Tracking the fluorescencelifetimes in Region ‘B’ reveals threecharacteristic decay times, two showing atransient nature and a third component risingover the course of melanin formation. Thecomponent with the lifetime of 1.79 ns is likelyto be 5,6-Dihydroxy-Indole (DHI) [3].

DHICA DHICA DHI

Using EEMs we identify differences between lab generated and naturally occurring melanin and showhow the addition of the micro nutrients can lead to a melanin closer in characteristics to the naturalform (Figure below).

The production of eumelanin in the lab is a well established technique yielding highly reproducibleresults. Alas melanin extracted from natural sources does show small but intriguing differences to labgenerated melanin. The addition of micro-nutrients like transition metal ions to the reaction can alterthe characteristics of the melanin generated [5] (Figure below).

In the human body eumelanin derives from theamino acid Tyrosine which is then converted byenzymatic action and oxidisation into the moleculeL-Dopa to start the melanin formation pathway.Starting the reaction directly from L-Dopa hasproven to be a realistic method to investigatemelanin in laboratory conditions [1].

Figure 2: Evolution of the absorption spectrum of eumelanin

Shown are the absorption spectra of de novo forming melanin recordedin 5 minute intervals at pH 8 (left) and pH 8.3 (right). The pH changeleads to the blurring of the isosbestic point at 320nm emission.

Figure 5: Evolution of lifetimes

Tracking the evolution of fluorescentlifetimes in areas of interest allows topinpoint the presence of characteristicmelanin components.

Figure 1: The melanin formation pathways

Melanin is generated through a complex network of reaction-pathwaysleading to eumelanin (black-brown pigment) and pheomelanin (reddish).By adding or omitting Cysteine and the enzyme Tyrosinase we cangenerate pure eumelanin or a mixture of both melanin types.

Figure 4: Areas of interest in the excitation-emission matrix

Recording EEMs at different times during the melanin formation process reveals regions of high excitationand emission. We observe a characteristic area ‘A’ where the initial L-Dopa molecule absorbs andfluoresces. Areas ‘B’ and ‘C’ show a longer joint excitation wavelength around 325nm and emission at415nm and 535nm respectively.

Figure 6a: Micro-nutrients influence eumelanin structure

Adding copper to de novo formingmelanin simplifies the fluorescencedecay of melanin emitting at 480nmand 530nm (1) [5].

Variations in the pH as well asaddition of transition metal ionsleads to striking differences inmelanin colour (2).

Figure 6b: The effect of micro-nutrients on EEMs

Comparing the EEM of laboratorymelanin (1) with that of naturalsepia melanin (2) we findcharacteristic differences like ashort wavelength area present innatural melanin but not in labmelanin (ex: 275nm, em:340nm).Addition of 10 M copper ionspartially restores this area (3).

Figure 3: The EEM of synthesised eumelanin

Joined recording of fluorescence excitation and emission yieldsa characteristic ‘landscape’ of melanin fluorescence: a uniquespectral fingerprint.

pH 9 & 10 pH 9 & 10 pH 10 pH 10

no ions Cu2+ Ni2+ K+

300 400 500 600 700

300

400

500

600

340

275

0

2000000

4000000

Sca

le =

36

0

2000000

4000000 Scale = 36

300 400 500 600 700

300

400

500

600

340

275

0

2000000

4000000

Sca

le =

36

0

2000000

4000000 Scale = 36

300 400 500 600 700

300

400

500

600

340

275

0

2000000

4000000

Sca

le =

36

0

2000000

4000000 Scale = 36

unmodified melanin melanin from Sepia Officinalis melanin generated with Cu2+