Transcript
Page 1: acquired by FIB/SEM. - Vision Day · 2) Take image of fl at surface (SEM) 3) Remove thin slice (FIB) 5) Continue with step 2 e-beam Often tomography is used to acquire 3D images

Wh

y F

IB/S

EM

?W

hy n

ot

cry

o?

Sam

ple

pre

para

tion

Refe

ren

ces

Ackn

ow

led

gem

en

ts

Univ

ers

ity o

f C

op

enhag

en

B.

Lub

elli

, D

.A.M

. d

e W

inte

r, J.A

. Po

st,

R.P

.J.

van

Hees,

M.R

. D

rury

, C

ryo-F

ib-S

EM

an

d M

IP s

tud

y o

f p

oro

sity

and

pore

siz

e d

istr

ibu

tion

of

bento

nit

e a

nd

kaolin

at

diff

ere

nt

mois

ture

conte

nts

, A

pp

lied

Cla

y S

cience

, 2

01

3,

80

-81

, p

p.

35

8-3

65

J.C

. R

iem

ers

ma,

Osm

ium

Tetr

oxid

e F

ixati

on o

f Li

pid

s: N

atu

re o

f th

e R

eact

ion P

rod

uct

s, J H

isto

chem

Cyto

chem

19

63

11

: 4

36

OsO

4 fi

xati

on

Usi

ng

th

e p

revio

usl

y d

esc

rib

ed

pre

para

tion m

eth

od

im

ag

es

were

ta

ken s

how

ing

thre

e d

iffere

nt

ph

ase

s:

Liq

uid

ph

ase

(lip

id)

Bulk

phase

(ch

alk

)

Air

bu

bb

les

Veri

fyin

g t

he o

bserv

ati

on

s:

Air

bu

bb

les

ind

icate

the o

bse

rvati

on o

f a fi

xed

liq

uid

Ele

menta

l co

ntr

ast

due t

o d

iffere

nt

den

sity

of

lipid

and

bu

lk

Info

rmati

on c

an b

e g

ath

ere

d f

rom

2D

im

ag

es a

s w

ell a

s f

rom

3D

im

ag

e

sta

cks a

cquir

ed

by F

IB/S

EM

.

Fu

ture

possib

ilit

ies:

Dir

ect

ob

serv

ati

on o

f fluid

dis

trib

uti

ons

for

diff

ere

nt

satu

rati

ons

as

well

as

the p

oss

ibili

ty o

f ele

menta

l m

ap

pin

g.

Than

ks t

o t

he N

an

oG

eoS

cience

gro

up

at

Cop

enhag

en

Univ

ers

ity f

or

enab

ling

this

work

in t

he f

ram

ew

ork

of

the P

-cub

ed

pro

ject

.

Sp

eci

al th

anks

to Z

hila

Nik

rozi

and

Kla

us

Qvort

rup

fro

m t

he C

ore

Faci

lity f

or

Inte

gra

ted

Mic

rosc

op

y (

CFI

M)

Cop

en

hag

en.

Imag

ing

liq

uid

s in

pore

s -

b

eyon

d X

-ray t

om

og

rap

hy

Lipid

Fix

ati

on in p

oro

us

sam

ple

s

Resu

lts

Ralp

h H

art

i, H

enn

ing

Søre

nse

n,

Kim

Dalb

y,

Susa

n S

tip

pN

ano-S

cience

Cente

r, U

niv

ers

ity o

f C

op

enh

agen,

Univ

ers

itets

park

en 5

, 2

10

0 K

øb

enhavn,

Denm

ark

Focu

sed

Ion

Beam

- S

can

nin

g

Ele

ctron

Mic

roscop

y (

FIB

/SEM

)

FIB

/SEM

sa

mple

pre

para

tion

befo

re

and

aft

er

rem

ovin

g s

lices

usi

ng t

he F

ocuse

d I

on

Beam

-

the

dir

ecti

on

of

the

imagin

g

ele

ctr

on b

eam

is

indic

ate

d b

y t

he a

rrow

FIB

/SEM

is c

om

bin

ing t

he im

agin

g c

apabilit

ies o

f th

e S

cannin

g E

lectr

on M

icro

scope w

ith

the s

am

ple

m

anip

ula

tion o

pport

un

itie

s o

f th

e F

ocused Ion

B

eam

.

Imag

ing

ste

ps:

1)

Cu

ttin

g a

flat

surf

ace

of

the

sam

ple

(FI

B)

2)

Take

imag

e of

flat

surf

ace

(SEM

)

3)

Rem

ove

thin

slic

e (F

IB)

5)

Con

tinue

wit

h s

tep

2

e-b

eam

Oft

en t

om

og

rap

hy is

use

d t

o a

cquir

e 3

D im

ag

es o

f p

oro

us

mate

rials

(se

e c

en

tral im

ag

e).

Dra

wb

ack

s of

this

tech

nolo

gy

how

ever

are

the lim

ited

num

ber

of

imag

ing

mod

es

and

th

e

exp

ensi

ve a

nd

com

ple

x im

ag

e a

cquis

itio

n.

This

work

pre

sents

a n

ew

sam

ple

pre

para

tion

meth

od

for

imag

ing

lip

ids

in p

oro

us

syst

em

s usi

ng

FIB

/SEM

, overc

om

ing

the lim

itati

ons

of

tom

og

rap

hy a

nd

tack

ling

som

e c

halle

ng

es

of

the c

lass

ical S

EM

ap

pro

ach

.

FIB

/SEM

off

ers

:

Fast

im

ag

e a

cqu

isit

ion (

can

be d

one a

t all

FIB

/SE

M s

etu

ps)

Hig

h s

pati

al re

solu

tion

Mu

ltip

le im

ag

ing

mod

es

(BS

E,

SE

, ED

X)

How

ever

FIB

/SEM

is

a d

est

ruct

ive m

eth

od

lim

itin

g t

he d

ata

colle

ctio

n t

o a

one-t

ime p

oss

ibili

ty.

The d

irect

ob

serv

ati

on

of

the p

ore

sp

ace

, m

ad

e p

oss

ible

by

FIB

/SEM

, and

its

conte

nt

elim

inate

s th

e n

eed

for

imag

e

reco

nst

ruct

ion a

nd

off

ers

a d

irect

vie

w o

n t

he a

rea o

f in

tere

st.

Imm

ob

ilizi

ng

liq

uid

s b

y f

reezi

ng

th

em

is

a c

om

mon a

pp

roach

to im

ag

e

liquid

s in

th

e S

can

nin

g E

lectr

on

Mic

roscop

e (

SEM

). H

ow

ever

com

bin

ing

it

wit

h t

he ion m

illin

g p

roce

ss o

f th

e F

IB/S

EM

is,

esp

eci

ally

consi

deri

ng

poro

us

rock

sam

ple

s, a

challe

ng

ing

task

.

The m

ost

pop

ula

r ap

pro

ach

for

cryo-S

EM

im

ag

ing

of

rock

s is

a

fractu

re p

rocess incl

ud

ing

fra

cturi

ng

the s

am

ple

insi

de t

he S

EM

by

the u

se o

f a b

lad

e (

B.

Lub

elli

et

al.,

20

13

).

Fra

ctu

re t

ech

niq

ue:

No 3

D in

form

ati

on

Top

og

rap

hic

contr

ast

due t

o t

he n

ot

suffi

cientl

y fl

at

surf

ace

aft

er

fract

uri

ng

Fixati

ng

flu

ids

wit

hou

t th

e n

eed

of

freezin

g t

hem

(usi

ng

the

tech

niq

ue illu

stra

ted

in t

his

work

) enab

les

the u

se o

f th

e F

ocu

sed

Ion

Beam

pro

vid

ing

the c

ap

ab

iliti

es

of

3D

info

rmati

on a

s w

ell

as flat

surf

ace

s w

ith

out

top

og

rap

hic

con

trast

.

Ori

gin

al im

ag

eB

ulk

colo

ure

dPo

res

colo

ure

dA

ir b

ub

ble

s co

loure

d

Osm

ium

tetr

oxid

e (

OsO

4) fixati

on is

wid

ely

use

d

in L

ife S

cience

s to

im

mob

ilize

lip

ids

by r

eact

ing

wit

h

unsa

tura

ted

bond

s in

fatt

y

aci

ds

to f

orm

dio

ls.

Oxid

ati

on o

f O

sO4

leadin

g t

o t

he

fixati

on o

f u

nsa

tura

ted lip

ids

(aft

er

J.C

. R

iem

ers

ma, 1

96

2)

Osm

ium

tetr

oxid

e

(OsO

4)

Reacti

on

ste

ps:

Op

en

ing

up

dou

ble

bond

s

C

ycl

oad

dit

ion t

o f

orm

osm

ate

est

er

Rap

id h

yd

roly

sis

lead

ing

to v

icin

ol d

iol

Th

e s

am

ple

To t

ake

ad

van

tag

e o

f th

e p

rinci

ple

of

Osm

ium

Tetr

oxid

e F

ixati

on t

he

sam

ple

has

to b

e fl

ush

ed

wit

h a

lip

id c

onta

inin

g a

suffi

cient

num

ber

of

unsa

tura

ted

fatt

y a

cid

s. S

unfl

ow

er

oil

is

a s

uit

ab

le c

hoic

e.

Em

erg

e s

am

ple

in S

unflow

er

Oil

Heat

up

to a

round

80

°C f

or

an h

ou

r

Take

the s

am

ple

out

Put

sam

ple

in O

smiu

m T

etr

oxid

e g

ase

ous

en

vir

onm

ent

(~ 2

d

ays)

Aft

er

follo

win

g t

his

pro

ced

ure

the lip

id insi

de t

he p

ore

s is

fixe

d a

nd

ca

n b

e t

reate

d a

s a s

olid

.

Basi

c kn

ow

led

ge a

bout

the invest

igate

d c

halk

sam

ple

(Aalb

org

outc

rop

) is

gath

ere

d b

y d

ata

analy

sis

on

tom

og

rap

hic

im

ag

es

(see c

entr

al im

ag

e).

Poro

sity

: ~

50.9

%

Sp

ecific

Su

rface

Are

a: ~

0.6

21 m

2/g

Perm

eab

ility

: ~

32.2

4 m

D

The p

erm

eab

ility

is

calc

ula

ted

usi

ng

th

e K

oze

ny-

Carm

an

eq

uati

on,

i.e.

base

d o

n t

he p

oro

sity

and

sufa

ce a

rea.

3D

im

age d

ata

set

wit

h fi

xed liq

uid

insi

de o

f pore

s

Recommended