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Carbon and Organic Molecules

Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

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Page 1: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Carbon and Organic Molecules

Page 2: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Organic Molecules

Organic molecules —compounds mostly found in living things and containing the element carbon.

Ex. Carbohydrates, lipids.

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 3: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Fig. 4-1

Page 4: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Organic molecule origins• Vitalism – organic molecules can only be made by

living organisms.

• Mechanism -is the view that organic molecules can be created through physical and chemical means.

• Miller proved mechanism in an experiment.

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 5: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Fig. 4-2

Water vapor

H 2NH

3

“Atmosphere”

Electrode

Condenser

Coldwater

Cooled watercontainingorganicmolecules

Sample forchemical analysis

H2O“sea”

EXPERIMENT

CH4

Page 6: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Why use carbon4 reasons:

-4 valence electrons, can form 4 bonds

-can link together in chains, branches, or rings

-can form single, double, or triple bonds

-bonds with a variety of elements

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 7: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Fig. 4-4

Hydrogen(valence = 1)

Oxygen(valence = 6)

Nitrogen(valence = 5)

Carbon(valence = 4)

H O N C

Page 8: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Fig. 4-3

NameMolecular Formula

Structural Formula

Ball-and-StickModel

Space-FillingModel

(a) Methane

(b) Ethane

(c) Ethene (ethylene)

Page 9: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Ethane Propane1-Butene 2-Butene

(c) Double bonds

(d) RingsCyclohexane Benzene

Butane 2-Methylpropane(commonly called isobutane)

(b) Branching

(a) Length

Hydrocarbons – only carbon and hydrogen

Page 10: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Isomers• Isomers are compounds with the same molecular

formula but different shapes:

– Structural isomers have different covalent arrangements of their atoms

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 11: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

• Geometric isomers have the same covalent arrangements but their functional groups are in different locations

Isomers

Page 12: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

– Enantiomers are isomers that are mirror images of each other

Isomers

Page 13: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

• Enantiomers are important in the pharmaceutical industry

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 14: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Functional Groups• Functional groups – They are the components of

organic molecules that are most commonly involved in chemical reactions. They give the molecules specific properties.

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 15: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

• The seven functional groups that are most important in the chemistry of life:

– Hydroxyl group

– Carbonyl group

– Carboxyl group

– Amino group

– Sulfhydryl group

– Phosphate group

– Methyl group

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 16: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,
Page 17: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

sugars

Page 18: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,
Page 19: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

(Builds proteins)

Page 20: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

Found in proteins

Page 21: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

(fats)

Page 22: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,
Page 23: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

ATP• adenosine triphosphate (ATP), is the primary

energy-transferring molecule in the cell

• ATP consists of an organic molecule called adenosine attached to a string of three phosphate groups

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

• Adenosine

Page 24: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

• A phosphate group is removed from the ATP which releases energy

• The ATP then becomes (ADP)

Page 26: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

You should now be able to:

1. Explain how carbon’s electron configuration explains its ability to form large, complex, diverse organic molecules

2. Describe how carbon skeletons may vary and explain how this variation contributes to the diversity and complexity of organic molecules

3. Distinguish among the three types of isomers: structural, geometric, and enantiomer

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 27: Carbon and Organic Molecules. Organic Molecules Organic molecules — compounds mostly found in living things and containing the element carbon. Ex. Carbohydrates,

4. Name the major functional groups found in organic molecules; describe the basic structure of each functional group and outline the chemical properties of the organic molecules in which they occur

5. Explain how ATP functions as the primary energy transfer molecule in living cells

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings